© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5864 |
| Gene name | |
| Location | Contig_2969:627..1393 |
| Strand | - |
| Gene length (bp) | 766 |
| Transcript length (bp) | 393 |
| Coding sequence length (bp) | 393 |
| Protein length (aa) | 131 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08449 | UAA | UAA transporter family | 1.9E-36 | 2 | 114 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74750|YEA4_SCHPO | UDP-N-acetylglucosamine transporter yea4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yea4 PE=3 SV=1 | 2 | 114 | 1.0E-28 |
| sp|Q969S0|S35B4_HUMAN | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Homo sapiens GN=SLC35B4 PE=1 SV=1 | 2 | 114 | 1.0E-21 |
| sp|Q5R8M3|S35B4_PONAB | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Pongo abelii GN=SLC35B4 PE=2 SV=1 | 2 | 114 | 1.0E-21 |
| sp|Q95KB4|S35B4_MACFA | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Macaca fascicularis GN=SLC35B4 PE=2 SV=1 | 2 | 114 | 1.0E-21 |
| sp|Q8CIA5|S35B4_MOUSE | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Mus musculus GN=Slc35b4 PE=2 SV=2 | 2 | 114 | 4.0E-21 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O74750|YEA4_SCHPO | UDP-N-acetylglucosamine transporter yea4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yea4 PE=3 SV=1 | 2 | 114 | 1.0E-28 |
| sp|Q969S0|S35B4_HUMAN | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Homo sapiens GN=SLC35B4 PE=1 SV=1 | 2 | 114 | 1.0E-21 |
| sp|Q5R8M3|S35B4_PONAB | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Pongo abelii GN=SLC35B4 PE=2 SV=1 | 2 | 114 | 1.0E-21 |
| sp|Q95KB4|S35B4_MACFA | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Macaca fascicularis GN=SLC35B4 PE=2 SV=1 | 2 | 114 | 1.0E-21 |
| sp|Q8CIA5|S35B4_MOUSE | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Mus musculus GN=Slc35b4 PE=2 SV=2 | 2 | 114 | 4.0E-21 |
| sp|P40004|YEA4_YEAST | UDP-N-acetylglucosamine transporter YEA4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YEA4 PE=1 SV=1 | 3 | 114 | 6.0E-21 |
| sp|Q9W429|S35B4_DROME | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Drosophila melanogaster GN=Efr PE=2 SV=1 | 1 | 114 | 2.0E-20 |
| sp|Q00974|YEA4_KLULA | UDP-N-acetylglucosamine transporter YEA4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=YEA4 PE=3 SV=1 | 1 | 127 | 5.0E-20 |
| sp|Q7ZW46|S35B4_DANRE | UDP-xylose and UDP-N-acetylglucosamine transporter OS=Danio rerio GN=slc35b4 PE=2 SV=1 | 4 | 114 | 3.0E-18 |
| sp|Q869W7|S35B4_DICDI | UDP-N-acetylglucosamine transporter slc35b4 OS=Dictyostelium discoideum GN=slc35b4 PE=3 SV=2 | 2 | 119 | 3.0E-13 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 25 | 47 | 22 |
| 2 | 68 | 85 | 17 |
| 3 | 90 | 112 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5864 MLGLIFGGCCSNVYALEAIINFEPASGTLLTFIQFLFVAATGYVAQFDKTRPPFFIAPAKVPMRRWMVNIILFFS INLLNNHAFSYDISVPVHIILRSGGSIMTMAAGYIYGKRCERKDGPRDVHVASFR* |
| Coding | >Hirsu2|5864 ATGCTAGGCCTAATTTTTGGCGGATGCTGCTCTAATGTTTATGCTCTTGAAGCCATCATCAACTTCGAGCCTGCC AGCGGAACACTTCTGACATTTATTCAATTTCTGTTCGTGGCAGCCACGGGCTACGTAGCCCAGTTTGACAAAACC AGGCCGCCGTTTTTTATCGCTCCTGCCAAGGTTCCAATGAGGCGATGGATGGTTAATATTATCCTCTTCTTCAGC ATCAACCTTCTCAACAATCATGCCTTCAGCTACGACATATCTGTGCCGGTTCATATCATATTGCGGTCTGGGGGT AGTATCATGACCATGGCGGCGGGATATATCTATGGCAAGAGATGCGAAAGAAAAGACGGACCCAGAGATGTCCAC GTGGCCAGCTTTCGATAG |
| Transcript | >Hirsu2|5864 ATGCTAGGCCTAATTTTTGGCGGATGCTGCTCTAATGTTTATGCTCTTGAAGCCATCATCAACTTCGAGCCTGCC AGCGGAACACTTCTGACATTTATTCAATTTCTGTTCGTGGCAGCCACGGGCTACGTAGCCCAGTTTGACAAAACC AGGCCGCCGTTTTTTATCGCTCCTGCCAAGGTTCCAATGAGGCGATGGATGGTTAATATTATCCTCTTCTTCAGC ATCAACCTTCTCAACAATCATGCCTTCAGCTACGACATATCTGTGCCGGTTCATATCATATTGCGGTCTGGGGGT AGTATCATGACCATGGCGGCGGGATATATCTATGGCAAGAGATGCGAAAGAAAAGACGGACCCAGAGATGTCCAC GTGGCCAGCTTTCGATAG |
| Gene | >Hirsu2|5864 ATGCTAGGCCTAATTTTTGGCGGATGCTGCTCTAATGTAATGTCGCATGCTGCCGCCGCCTCGTTGGTATGTAGT TCGCCGTCCTTGATACTGACAACGGCTCGCCAGGTTTATGCTCTTGAAGCCATCATCAAGTAAGCAGTCGTTGTC ATATTCACGGCACGAGTGGCTGCCCCAGGTCCCTCCACGCATGGATCAAGCTGACATGACATGACACTCGCTCGT CGAAGCTTCGAGCCTGCCAGCGGTATAGAATCCCAGAAGCTTTTGATCCGTCGCATTGCTAAATTTGAGCCAGGA ACACTTCTGACATTTATTCAATTTCTGTTCGTGGCAGCCACGGGCTACGTAGCCCAGTTTGACAAAACCAGGCCG CCGTTTTTTATCGCTCCTGCCAAGGTTCCAATGAGGCGATGGATGGTTAATATTATCCTCTTCTTCAGCATCAAC CTTCTCAACAATCATGCCTTCAGCTACGACATATCTGTGCCGGTTCATATCATATTGCGGTCTGGGGGTAGTATC ATGACCATGGCGGCGGGATATATCTATGGCAAGAGGTATTCGAGCACTCAGATTTTGGCCGTTACGTTCCTCAGC TTCGGCGTTGTGCTAGCCGCCTGGTCAGATGCGAAAGAAAAGGTGAACAACCCAGTCTTGAGGAGTGAACCGGAA AATTACATTCGTCATGGGCCGACGTCTGATACCTTACTGGAACTCGTTCCTAGACGGACCCAGAGATGTCCACGT GGCCAGCTTTCGATAG |