Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5846
Gene name
LocationContig_2955:90..869
Strand+
Gene length (bp)779
Transcript length (bp)609
Coding sequence length (bp)609
Protein length (aa) 203

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 117 134 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5846
MTVSDRMHAHAELVAVQAKLRDWPSLLPSCLVIQHEERRRSPVTSHNCPLHLSFYAAQVLLYRALMYPPTRAAKT
TPGSNLRKWFPAALTEFESFAEFLTCINKHDLFGFWGRHARSQLILCGNFLVYLFLLAWERRDIERAYRLLESFH
QTVHELHEYDNVVSKTLLRAATLRIDSFFTQAAQIMRHGGDGTVTSMLNPLH*
Coding >Hirsu2|5846
ATGACCGTGAGCGATAGGATGCACGCCCACGCCGAGCTCGTCGCCGTCCAGGCCAAGCTCCGCGACTGGCCCAGC
CTGCTCCCTTCGTGCCTCGTCATCCAGCACGAGGAGCGCCGCCGATCACCCGTCACCTCGCATAATTGCCCTCTC
CATCTATCCTTCTACGCTGCCCAGGTCCTCCTCTACCGGGCCCTCATGTACCCTCCCACGCGCGCGGCCAAGACG
ACACCCGGCTCCAACCTTCGCAAGTGGTTCCCGGCCGCGCTCACCGAGTTTGAGTCCTTTGCCGAGTTCCTCACC
TGCATCAACAAGCACGACCTGTTCGGCTTCTGGGGGCGACATGCCCGGTCGCAGCTCATCCTGTGCGGAAACTTC
CTCGTCTATCTCTTCCTGCTGGCCTGGGAGCGCCGCGATATCGAGAGGGCGTACCGCCTGCTCGAGAGCTTCCAC
CAGACGGTCCACGAGCTGCACGAGTACGACAACGTCGTTTCCAAGACGCTGCTCCGCGCCGCGACCCTACGAATC
GACTCCTTCTTCACGCAGGCGGCCCAGATCATGCGCCACGGCGGCGACGGAACCGTCACGTCCATGCTGAACCCT
CTGCACTAG
Transcript >Hirsu2|5846
ATGACCGTGAGCGATAGGATGCACGCCCACGCCGAGCTCGTCGCCGTCCAGGCCAAGCTCCGCGACTGGCCCAGC
CTGCTCCCTTCGTGCCTCGTCATCCAGCACGAGGAGCGCCGCCGATCACCCGTCACCTCGCATAATTGCCCTCTC
CATCTATCCTTCTACGCTGCCCAGGTCCTCCTCTACCGGGCCCTCATGTACCCTCCCACGCGCGCGGCCAAGACG
ACACCCGGCTCCAACCTTCGCAAGTGGTTCCCGGCCGCGCTCACCGAGTTTGAGTCCTTTGCCGAGTTCCTCACC
TGCATCAACAAGCACGACCTGTTCGGCTTCTGGGGGCGACATGCCCGGTCGCAGCTCATCCTGTGCGGAAACTTC
CTCGTCTATCTCTTCCTGCTGGCCTGGGAGCGCCGCGATATCGAGAGGGCGTACCGCCTGCTCGAGAGCTTCCAC
CAGACGGTCCACGAGCTGCACGAGTACGACAACGTCGTTTCCAAGACGCTGCTCCGCGCCGCGACCCTACGAATC
GACTCCTTCTTCACGCAGGCGGCCCAGATCATGCGCCACGGCGGCGACGGAACCGTCACGTCCATGCTGAACCCT
CTGCACTAG
Gene >Hirsu2|5846
ATGACCGTGAGCGATAGGATGCACGCCCACGCCGAGCTCGTCGCCGTCCAGGCCAAGCTCCGCGACTGGCCCAGC
CTGCTCCCTTCGTGCCTCGTCATCCAGCACGAGGAGCGCCGCCGATCACCCGTCACCTCGCATAATTGTACGTCT
TCCCCCTCCCCCTTTCTCCGGCCCTTCCTTGCTCTTCCGAACCGCATGGTCCCGAGTTCTCACCCGGCTCTCTAT
CCCCTCAGGCCCTCTCCATCTATCCTTCTACGCTGCCCAGGTCCTCCTCTACCGGGCCCTCATGTACCCTCCCAC
GCGCGCGGCCAAGACGACACCCGGCTCCAACCTTCGCAAGTGGTTCCCGGCCGCGCTCACCGAGTTTGAGTCCTT
TGCCGAGTTCCTCACCTGCATCAACAAGCACGACCTGTTCGGCTTCTGGGGGCGACGTGCGTTGCACCCTTGGCC
TAATCTTGGATTCTTGTCGTCTGGGCTCGGCTGACGGTTTTGAGGGCGCGCCCTCGATAGATGCCCGGTCGCAGC
TCATCCTGTGCGGAAACTTCCTCGTCTATCTCTTCCTGCTGGCCTGGGAGCGCCGCGATATCGAGAGGGCGTACC
GCCTGCTCGAGAGCTTCCACCAGACGGTCCACGAGCTGCACGAGTACGACAACGTCGTTTCCAAGACGCTGCTCC
GCGCCGCGACCCTACGAATCGACTCCTTCTTCACGCAGGCGGCCCAGATCATGCGCCACGGCGGCGACGGAACCG
TCACGTCCATGCTGAACCCTCTGCACTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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