© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5838 |
| Gene name | |
| Location | Contig_295:13288..15160 |
| Strand | + |
| Gene length (bp) | 1872 |
| Transcript length (bp) | 1746 |
| Coding sequence length (bp) | 1746 |
| Protein length (aa) | 582 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00728 | Glyco_hydro_20 | Glycosyl hydrolase family 20, catalytic domain | 1.9E-91 | 190 | 530 |
| PF14845 | Glycohydro_20b2 | beta-acetyl hexosaminidase like | 9.4E-23 | 20 | 163 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AUH6|HEX1_ARTBC | Beta-hexosaminidase ARB_07893 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07893 PE=1 SV=1 | 14 | 570 | 2.0E-137 |
| sp|Q9SYK0|HEXO2_ARATH | Beta-hexosaminidase 2 OS=Arabidopsis thaliana GN=HEXO2 PE=1 SV=1 | 93 | 572 | 1.0E-82 |
| sp|E9DFH0|HEX1_COCPS | Beta-hexosaminidase 1 OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) GN=HEX1 PE=1 SV=1 | 129 | 572 | 6.0E-68 |
| sp|Q8WSF3|FDL_DROME | Probable beta-hexosaminidase fdl OS=Drosophila melanogaster GN=fdl PE=1 SV=1 | 94 | 578 | 3.0E-66 |
| sp|P49010|HEXC_BOMMO | Chitooligosaccharidolytic beta-N-acetylglucosaminidase OS=Bombyx mori PE=1 SV=1 | 97 | 580 | 9.0E-66 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AUH6|HEX1_ARTBC | Beta-hexosaminidase ARB_07893 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07893 PE=1 SV=1 | 14 | 570 | 2.0E-137 |
| sp|Q9SYK0|HEXO2_ARATH | Beta-hexosaminidase 2 OS=Arabidopsis thaliana GN=HEXO2 PE=1 SV=1 | 93 | 572 | 1.0E-82 |
| sp|E9DFH0|HEX1_COCPS | Beta-hexosaminidase 1 OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) GN=HEX1 PE=1 SV=1 | 129 | 572 | 6.0E-68 |
| sp|Q8WSF3|FDL_DROME | Probable beta-hexosaminidase fdl OS=Drosophila melanogaster GN=fdl PE=1 SV=1 | 94 | 578 | 3.0E-66 |
| sp|P49010|HEXC_BOMMO | Chitooligosaccharidolytic beta-N-acetylglucosaminidase OS=Bombyx mori PE=1 SV=1 | 97 | 580 | 9.0E-66 |
| sp|P43077|HEX1_CANAX | Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1 | 129 | 570 | 3.0E-65 |
| sp|D4AYT4|HEX2_ARTBC | Probable beta-hexosaminidase ARB_01353 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01353 PE=1 SV=1 | 129 | 572 | 2.0E-64 |
| sp|A7WM73|HEXO1_ARATH | Beta-hexosaminidase 1 OS=Arabidopsis thaliana GN=HEXO1 PE=1 SV=1 | 1 | 572 | 3.0E-53 |
| sp|P20060|HEXB_MOUSE | Beta-hexosaminidase subunit beta OS=Mus musculus GN=Hexb PE=1 SV=2 | 19 | 575 | 3.0E-52 |
| sp|P07686|HEXB_HUMAN | Beta-hexosaminidase subunit beta OS=Homo sapiens GN=HEXB PE=1 SV=3 | 11 | 574 | 7.0E-52 |
| sp|Q54K55|HEXB1_DICDI | Beta-hexosaminidase subunit B1 OS=Dictyostelium discoideum GN=hexb1 PE=3 SV=1 | 130 | 566 | 9.0E-52 |
| sp|Q6AXR4|HEXB_RAT | Beta-hexosaminidase subunit beta OS=Rattus norvegicus GN=Hexb PE=2 SV=1 | 8 | 577 | 4.0E-51 |
| sp|P49614|HEXB_FELCA | Beta-hexosaminidase subunit beta OS=Felis catus GN=HEXB PE=2 SV=2 | 19 | 570 | 8.0E-51 |
| sp|Q8L7S6|HEXO3_ARATH | Beta-hexosaminidase 3 OS=Arabidopsis thaliana GN=HEXO3 PE=1 SV=1 | 6 | 565 | 4.0E-48 |
| sp|Q54K56|HEXB2_DICDI | Beta-hexosaminidase subunit B2 OS=Dictyostelium discoideum GN=hexb2 PE=3 SV=1 | 18 | 565 | 4.0E-47 |
| sp|P29416|HEXA_MOUSE | Beta-hexosaminidase subunit alpha OS=Mus musculus GN=Hexa PE=1 SV=2 | 58 | 572 | 3.0E-45 |
| sp|P13723|HEXA1_DICDI | Beta-hexosaminidase subunit A1 OS=Dictyostelium discoideum GN=hexa1 PE=1 SV=1 | 129 | 570 | 6.0E-45 |
| sp|P06865|HEXA_HUMAN | Beta-hexosaminidase subunit alpha OS=Homo sapiens GN=HEXA PE=1 SV=2 | 131 | 572 | 8.0E-44 |
| sp|Q5RC84|HEXA_PONAB | Beta-hexosaminidase subunit alpha OS=Pongo abelii GN=HEXA PE=3 SV=1 | 131 | 572 | 1.0E-43 |
| sp|Q641X3|HEXA_RAT | Beta-hexosaminidase subunit alpha OS=Rattus norvegicus GN=Hexa PE=2 SV=1 | 58 | 572 | 2.0E-43 |
| sp|Q0V8R6|HEXA_BOVIN | Beta-hexosaminidase subunit alpha OS=Bos taurus GN=HEXA PE=2 SV=1 | 131 | 570 | 3.0E-43 |
| sp|Q29548|HEXB_PIG | Beta-hexosaminidase subunit beta OS=Sus scrofa GN=HEXB PE=1 SV=2 | 123 | 575 | 3.0E-42 |
| sp|Q54SC9|HEXA2_DICDI | Beta-hexosaminidase subunit A2 OS=Dictyostelium discoideum GN=hexa2 PE=3 SV=1 | 129 | 571 | 6.0E-41 |
| sp|Q22492|HEXA_CAEEL | Beta-hexosaminidase A OS=Caenorhabditis elegans GN=hex-1 PE=1 SV=1 | 131 | 564 | 1.0E-40 |
| sp|Q619W7|HEXA_CAEBR | Beta-hexosaminidase A OS=Caenorhabditis briggsae GN=hex-1 PE=3 SV=2 | 131 | 564 | 2.0E-38 |
| sp|Q86M34|HEXB_ENTHI | Beta-hexosaminidase subunit beta OS=Entamoeba histolytica GN=HEXB PE=1 SV=1 | 110 | 529 | 3.0E-34 |
| sp|P49008|HEXA_PORGI | Beta-hexosaminidase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=nahA PE=3 SV=2 | 130 | 529 | 3.0E-34 |
| sp|P96155|HEX1_VIBFU | Beta-hexosaminidase OS=Vibrio furnissii GN=exo I PE=1 SV=1 | 120 | 524 | 1.0E-27 |
| sp|P49009|HEXA_ENTHI | Beta-hexosaminidase subunit alpha OS=Entamoeba histolytica GN=HEXA PE=1 SV=2 | 130 | 529 | 1.0E-27 |
| sp|Q7WUL4|HEX20_CELFI | Beta-N-acetylhexosaminidase OS=Cellulomonas fimi GN=hex20 PE=1 SV=1 | 130 | 550 | 1.0E-25 |
| sp|Q54468|CHB_SERMA | Chitobiase OS=Serratia marcescens GN=chb PE=1 SV=1 | 134 | 330 | 3.0E-19 |
| sp|P13670|CHB_VIBHA | N,N'-diacetylchitobiase OS=Vibrio harveyi GN=chb PE=1 SV=1 | 132 | 284 | 3.0E-18 |
| sp|Q04786|HEX_VIBVL | Beta-hexosaminidase OS=Vibrio vulnificus GN=hex PE=3 SV=1 | 132 | 284 | 8.0E-14 |
| sp|P49007|HEXB_PSEO7 | Beta-hexosaminidase B OS=Pseudoalteromonas piscicida GN=nag096 PE=3 SV=1 | 120 | 296 | 3.0E-10 |
| sp|H2A0L6|HEX_PINMG | Putative beta-hexosaminidase OS=Pinctada margaritifera PE=1 SV=1 | 130 | 243 | 7.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1202 | 0.0465 | 0.8857 | 0.1389 | 0.0636 | 0.0287 | 0.3145 | 0.2981 | 0.1469 | 0.0018 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 19 | 0.9998 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GH20 | 3.6E-84 | 185 | 530 |
| Orthofinder run ID | 4 |
| Orthogroup | 299 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5838 MFSTTAFVIAALAFSPAIALWPVPQKFENGTEVLFIDQNVKVTYNGQDLPFKNDYTPPENEEFKSQNVVQSGVSR AAKGIFDDNFVPWKLRPRHSDFEPKADGEKKMIKNIAIEGPENEDFAVFKNGDVDESYALGISQDGEVKIGCKAS AGCLHGLESFVQLFYKHSAASEPLSYTPFAPVTIEDKPKFPHRGLIMDLARNWYPVDDIKRTIDAMSWNKMNRLH LHMTNTQSWPIQIESKPELADKGSYGKGLSYSPQDISGIYEYAIYRGINIIMEIDMPNHIGIVELAYPDQYAVAY NQQPWQWYCLEPPCGAFQMNNSNVTTFVNELFDDLLPRVQKYSTFFHTGGDELYKNDSAIDPTVRSNDSAVIAPL LQKFINNTHGKVREHKLRPVIWEDLISSWNQTIGEDVVVQAWLGDDSVKNLTAAGHKVIDSNLNFYYLDCGRGQW INFDNGEQFQKAYPFADYCSPTKNWRLIYSHDPTAGLPEEAAKLVLGGEVAAWSELIDPVNLDTNVWPRASAAAE VWWSGRLDASGQNRSQLDAAPRLAELRERMVARGVRALPVQMIYCTQGNRTECSGI* |
| Coding | >Hirsu2|5838 ATGTTTTCGACGACAGCTTTCGTGATAGCCGCACTGGCGTTCAGTCCCGCGATCGCGTTATGGCCTGTGCCTCAA AAATTCGAGAATGGAACGGAGGTCCTGTTCATCGACCAGAATGTGAAGGTCACTTACAACGGCCAAGATCTCCCA TTCAAGAACGACTACACGCCGCCGGAAAACGAAGAGTTCAAAAGCCAGAATGTCGTTCAGTCCGGAGTCTCGCGC GCCGCCAAGGGCATCTTCGACGACAACTTCGTCCCCTGGAAGCTGCGCCCGCGCCACTCCGACTTCGAGCCCAAG GCCGACGGCGAGAAGAAGATGATCAAGAACATCGCGATTGAGGGCCCCGAAAACGAGGATTTCGCAGTTTTCAAA AATGGCGACGTCGACGAATCCTACGCGCTGGGGATATCCCAGGATGGCGAGGTCAAGATCGGGTGCAAGGCTTCA GCGGGCTGCCTCCACGGCCTCGAGTCTTTCGTCCAGCTCTTCTACAAGCACAGCGCCGCGTCGGAGCCCTTGTCG TACACCCCGTTCGCCCCGGTCACGATCGAGGATAAGCCCAAGTTCCCTCATCGCGGGCTCATCATGGACCTGGCC CGCAACTGGTATCCCGTCGATGATATCAAGAGGACCATCGATGCTATGTCCTGGAACAAGATGAACCGCCTTCAT TTGCACATGACCAACACACAATCTTGGCCAATCCAGATTGAATCCAAGCCCGAGCTAGCTGACAAGGGCTCCTAC GGGAAAGGACTATCGTATTCACCACAAGATATCAGTGGCATCTATGAATACGCCATCTACCGCGGCATTAATATA ATCATGGAAATCGACATGCCTAACCACATCGGCATCGTCGAGCTAGCGTATCCAGACCAATATGCTGTTGCTTAT AACCAGCAGCCCTGGCAGTGGTACTGCCTCGAGCCGCCGTGTGGCGCGTTTCAGATGAATAACAGTAATGTGACC ACTTTCGTCAATGAGCTATTCGACGATCTGCTGCCTCGCGTCCAAAAATACTCGACCTTTTTTCATACCGGAGGA GATGAGCTCTACAAGAACGACTCGGCGATTGATCCCACAGTTCGCTCCAACGACTCGGCCGTCATCGCCCCGCTC CTACAGAAGTTCATCAACAACACCCACGGGAAGGTCCGTGAGCACAAGCTCAGGCCCGTCATCTGGGAGGACTTG ATCTCAAGCTGGAACCAGACGATTGGAGAAGACGTCGTAGTCCAGGCGTGGCTCGGCGACGACTCGGTTAAGAAT TTGACCGCAGCCGGCCACAAGGTCATCGACAGCAACCTCAACTTCTACTACCTCGACTGCGGCCGCGGCCAGTGG ATCAACTTCGACAACGGCGAGCAGTTCCAGAAAGCGTACCCGTTCGCCGACTACTGCTCGCCGACCAAGAACTGG CGCCTCATCTACTCGCACGACCCGACTGCCGGCCTCCCGGAAGAGGCCGCGAAGCTGGTCCTCGGCGGCGAGGTG GCCGCCTGGAGCGAGCTCATCGACCCGGTCAACCTCGACACCAACGTCTGGCCGCGCGCCAGCGCCGCGGCCGAG GTCTGGTGGTCCGGCAGGTTGGACGCCTCGGGCCAGAACCGCAGCCAGCTGGACGCGGCGCCCCGGCTGGCCGAG CTGAGAGAGAGGATGGTGGCCCGCGGCGTCAGGGCGTTGCCGGTGCAGATGATTTACTGCACGCAGGGCAACAGG ACCGAGTGTAGTGGTATTTGA |
| Transcript | >Hirsu2|5838 ATGTTTTCGACGACAGCTTTCGTGATAGCCGCACTGGCGTTCAGTCCCGCGATCGCGTTATGGCCTGTGCCTCAA AAATTCGAGAATGGAACGGAGGTCCTGTTCATCGACCAGAATGTGAAGGTCACTTACAACGGCCAAGATCTCCCA TTCAAGAACGACTACACGCCGCCGGAAAACGAAGAGTTCAAAAGCCAGAATGTCGTTCAGTCCGGAGTCTCGCGC GCCGCCAAGGGCATCTTCGACGACAACTTCGTCCCCTGGAAGCTGCGCCCGCGCCACTCCGACTTCGAGCCCAAG GCCGACGGCGAGAAGAAGATGATCAAGAACATCGCGATTGAGGGCCCCGAAAACGAGGATTTCGCAGTTTTCAAA AATGGCGACGTCGACGAATCCTACGCGCTGGGGATATCCCAGGATGGCGAGGTCAAGATCGGGTGCAAGGCTTCA GCGGGCTGCCTCCACGGCCTCGAGTCTTTCGTCCAGCTCTTCTACAAGCACAGCGCCGCGTCGGAGCCCTTGTCG TACACCCCGTTCGCCCCGGTCACGATCGAGGATAAGCCCAAGTTCCCTCATCGCGGGCTCATCATGGACCTGGCC CGCAACTGGTATCCCGTCGATGATATCAAGAGGACCATCGATGCTATGTCCTGGAACAAGATGAACCGCCTTCAT TTGCACATGACCAACACACAATCTTGGCCAATCCAGATTGAATCCAAGCCCGAGCTAGCTGACAAGGGCTCCTAC GGGAAAGGACTATCGTATTCACCACAAGATATCAGTGGCATCTATGAATACGCCATCTACCGCGGCATTAATATA ATCATGGAAATCGACATGCCTAACCACATCGGCATCGTCGAGCTAGCGTATCCAGACCAATATGCTGTTGCTTAT AACCAGCAGCCCTGGCAGTGGTACTGCCTCGAGCCGCCGTGTGGCGCGTTTCAGATGAATAACAGTAATGTGACC ACTTTCGTCAATGAGCTATTCGACGATCTGCTGCCTCGCGTCCAAAAATACTCGACCTTTTTTCATACCGGAGGA GATGAGCTCTACAAGAACGACTCGGCGATTGATCCCACAGTTCGCTCCAACGACTCGGCCGTCATCGCCCCGCTC CTACAGAAGTTCATCAACAACACCCACGGGAAGGTCCGTGAGCACAAGCTCAGGCCCGTCATCTGGGAGGACTTG ATCTCAAGCTGGAACCAGACGATTGGAGAAGACGTCGTAGTCCAGGCGTGGCTCGGCGACGACTCGGTTAAGAAT TTGACCGCAGCCGGCCACAAGGTCATCGACAGCAACCTCAACTTCTACTACCTCGACTGCGGCCGCGGCCAGTGG ATCAACTTCGACAACGGCGAGCAGTTCCAGAAAGCGTACCCGTTCGCCGACTACTGCTCGCCGACCAAGAACTGG CGCCTCATCTACTCGCACGACCCGACTGCCGGCCTCCCGGAAGAGGCCGCGAAGCTGGTCCTCGGCGGCGAGGTG GCCGCCTGGAGCGAGCTCATCGACCCGGTCAACCTCGACACCAACGTCTGGCCGCGCGCCAGCGCCGCGGCCGAG GTCTGGTGGTCCGGCAGGTTGGACGCCTCGGGCCAGAACCGCAGCCAGCTGGACGCGGCGCCCCGGCTGGCCGAG CTGAGAGAGAGGATGGTGGCCCGCGGCGTCAGGGCGTTGCCGGTGCAGATGATTTACTGCACGCAGGGCAACAGG ACCGAGTGTAGTGGTATTTGA |
| Gene | >Hirsu2|5838 ATGTTTTCGACGACAGCTTTCGTGATAGCCGCACTGGCGTTCAGTCCCGCGATCGCGTTATGGCCTGTGCCTCAA AAATTCGAGAATGGAACGGAGGTCCTGTTCATCGACCAGAATGTGAAGGTCACTTACAACGGCCAAGATGTACGC CGAATCGCTCGTCCATTAGCTCGACCTCTGTGCTCAGGTTGCTGATTCCGGGATCAACGCGCAGCTCCCATTCAA GAACGACTACACGCCGCCGGAAAACGAAGAGTTCAAAAGCCAGAATGTCGTTCAGTCCGGAGTCTCGCGCGCCGC CAAGGGCATCTTCGACGACAACTTCGTCCCCTGGAAGCTGCGCCCGCGCCACTCCGACTTCGAGCCCAAGGCCGA CGGCGAGAAGAAGATGATCAAGAACATCGCGATTGAGGGCCCCGAAAACGAGGATTTCGCAGTTTTCAAAAATGG CGACGTCGACGAATCCTACGCGCTGGGGATATCCCAGGATGGCGAGGTCAAGATCGGGTGCAAGGCTTCAGCGGG CTGCCTCCACGGCCTCGAGTCTTTCGTCCAGCTCTTCTACAAGCACAGCGCCGCGTCGGAGCCCTTGTCGTACAC CCCGTTCGCCCCGGTCACGATCGAGGATAAGCCCAAGTTCCCTCATCGCGGGCTCATCATGGACCTGGCCCGCAA CTGGTATCCCGTCGATGATATCAAGAGGACCATCGATGCTATGTCCTGGAACAAGATGAACCGCCTTCATTTGCA CATGACCAACACACAATCTTGGCCAATCCAGATTGAATCCAAGCCCGAGCTAGCTGACAAGGGCTCCTACGGGAA AGGACTATCGTATTCACCACAAGATATCAGTGGCATCTATGAATACGCCATCTACCGCGGCATTAATATAATCAT GGAAATCGACATGCCTAACCACATCGGCATCGTCGAGCTAGCGTATCCAGACCAATATGCTGTTGCTTATAACCA GCAGCCCTGGCAGTGGTACTGCCTCGAGCCGCCGTGTGGCGCGTTTCAGATGAATAACAGTAATGTGACCACTTT CGTCAATGAGCTATTCGACGATCTGCTGCCTCGCGTCCAAAAATACTCGACCTTTTTTCATACCGGAGGAGATGA GCTCTACAAGAACGACTCGGCGATTGATCCCACAGTTCGCTCCAACGACTCGGCCGTCATCGCCCCGCTCCTACA GAAGTTCATCAACAACACCCACGGGAAGGTCCGTGAGCACAAGCTCAGGCCCGTCATCTGGGAGGACTTGATCTC AAGCTGGAACCAGACGATTGGAGAAGACGTCGTAGTCCAGGCGTGGCTCGGCGACGACTCGGTTAAGAATTTGAC CGCAGCCGGCCACAAGGTCATCGACAGCAACCTCAACTTCTACGTGAGTAGCTCCGCTTACGGGAGGTCTCGTAG ACTCGCGCTGACACTGCACTGCAGTACCTCGACTGCGGCCGCGGCCAGTGGATCAACTTCGACAACGGCGAGCAG TTCCAGAAAGCGTACCCGTTCGCCGACTACTGCTCGCCGACCAAGAACTGGCGCCTCATCTACTCGCACGACCCG ACTGCCGGCCTCCCGGAAGAGGCCGCGAAGCTGGTCCTCGGCGGCGAGGTGGCCGCCTGGAGCGAGCTCATCGAC CCGGTCAACCTCGACACCAACGTCTGGCCGCGCGCCAGCGCCGCGGCCGAGGTCTGGTGGTCCGGCAGGTTGGAC GCCTCGGGCCAGAACCGCAGCCAGCTGGACGCGGCGCCCCGGCTGGCCGAGCTGAGAGAGAGGATGGTGGCCCGC GGCGTCAGGGCGTTGCCGGTGCAGATGATTTACTGCACGCAGGGCAACAGGACCGAGTGTAGTGGTATTTGA |