Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5836
Gene name
LocationContig_295:6896..7409
Strand+
Gene length (bp)513
Transcript length (bp)513
Coding sequence length (bp)513
Protein length (aa) 171

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12296 HsbA Hydrophobic surface binding protein A 2.2E-25 22 140

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9HFP8|MP1_ASPFM Cell wall mannoprotein 1 OS=Neosartorya fumigata GN=MP1 PE=1 SV=1 28 169 1.0E-11
sp|Q8TG42|MP1_ASPFL Cell wall mannoprotein 1 OS=Aspergillus flavus GN=mp1 PE=2 SV=1 59 169 2.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5836
MLFSKALLPLALLASSVVGDGNTIRVAMKRITGDTADLGKTVSSWHGDLFGALPVVGKAAALLASLKHGTHTARA
STALTTDETLVIATSTQELSDQVNKTLQAVIDAKPKFDHLFVSPLIHLTLEVEKGAADDFSNALLKKVPKDLQSI
AEELIKGIMNNFQKALDAYA*
Coding >Hirsu2|5836
ATGCTCTTCAGCAAGGCCCTCCTTCCCCTCGCGCTCCTCGCGTCGTCCGTCGTCGGCGACGGCAACACCATCCGC
GTTGCCATGAAGCGCATCACAGGCGACACGGCCGACCTGGGCAAGACCGTCTCCTCCTGGCACGGCGACCTCTTC
GGCGCCCTGCCCGTGGTCGGCAAGGCCGCCGCCCTGCTCGCCTCGCTCAAGCACGGCACCCACACCGCCCGCGCC
TCGACCGCGCTCACGACCGACGAGACGCTCGTCATCGCCACCTCGACCCAGGAGCTGTCGGACCAGGTCAACAAG
ACGCTCCAGGCCGTCATCGACGCCAAGCCCAAGTTCGACCACCTGTTCGTCAGCCCCCTCATCCACCTGACGCTC
GAGGTCGAGAAGGGCGCGGCCGACGACTTCAGCAACGCCCTCCTGAAAAAGGTGCCCAAGGACCTCCAGTCGATC
GCCGAGGAGCTCATCAAGGGCATCATGAACAACTTCCAGAAGGCCCTCGACGCCTATGCCTAG
Transcript >Hirsu2|5836
ATGCTCTTCAGCAAGGCCCTCCTTCCCCTCGCGCTCCTCGCGTCGTCCGTCGTCGGCGACGGCAACACCATCCGC
GTTGCCATGAAGCGCATCACAGGCGACACGGCCGACCTGGGCAAGACCGTCTCCTCCTGGCACGGCGACCTCTTC
GGCGCCCTGCCCGTGGTCGGCAAGGCCGCCGCCCTGCTCGCCTCGCTCAAGCACGGCACCCACACCGCCCGCGCC
TCGACCGCGCTCACGACCGACGAGACGCTCGTCATCGCCACCTCGACCCAGGAGCTGTCGGACCAGGTCAACAAG
ACGCTCCAGGCCGTCATCGACGCCAAGCCCAAGTTCGACCACCTGTTCGTCAGCCCCCTCATCCACCTGACGCTC
GAGGTCGAGAAGGGCGCGGCCGACGACTTCAGCAACGCCCTCCTGAAAAAGGTGCCCAAGGACCTCCAGTCGATC
GCCGAGGAGCTCATCAAGGGCATCATGAACAACTTCCAGAAGGCCCTCGACGCCTATGCCTAG
Gene >Hirsu2|5836
ATGCTCTTCAGCAAGGCCCTCCTTCCCCTCGCGCTCCTCGCGTCGTCCGTCGTCGGCGACGGCAACACCATCCGC
GTTGCCATGAAGCGCATCACAGGCGACACGGCCGACCTGGGCAAGACCGTCTCCTCCTGGCACGGCGACCTCTTC
GGCGCCCTGCCCGTGGTCGGCAAGGCCGCCGCCCTGCTCGCCTCGCTCAAGCACGGCACCCACACCGCCCGCGCC
TCGACCGCGCTCACGACCGACGAGACGCTCGTCATCGCCACCTCGACCCAGGAGCTGTCGGACCAGGTCAACAAG
ACGCTCCAGGCCGTCATCGACGCCAAGCCCAAGTTCGACCACCTGTTCGTCAGCCCCCTCATCCACCTGACGCTC
GAGGTCGAGAAGGGCGCGGCCGACGACTTCAGCAACGCCCTCCTGAAAAAGGTGCCCAAGGACCTCCAGTCGATC
GCCGAGGAGCTCATCAAGGGCATCATGAACAACTTCCAGAAGGCCCTCGACGCCTATGCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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