Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5825
Gene name
LocationContig_294:23396..24290
Strand-
Gene length (bp)894
Transcript length (bp)894
Coding sequence length (bp)894
Protein length (aa) 298

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01375 Enterotoxin_a Heat-labile enterotoxin alpha chain 8.0E-24 65 271

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P13810|E2AA_ECOLX Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 65 278 2.0E-09
sp|P43528|E2BA_ECOLX Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 41 267 2.0E-07
sp|P06717|ELAP_ECOLX Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 65 297 5.0E-07
sp|P43530|ELAH_ECOH1 Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 65 271 6.0E-07
sp|P01555|CHTA_VIBCH Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 65 244 6.0E-07

GO

GO Term Description Terminal node
GO:0090729 toxin activity Yes
GO:0005615 extracellular space Yes
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5825
MKSYWLQLLWTSVLLIGIVQGLLSPDDQLSQSAGKSHDKRQIQGFISTLRHISKPSFVWRGEFGRTPEDIKAAHG
FYARGFQKAMKGETFTPKEREEGASLYHHTTTLTSQYTKWVSTSSSPTVAFNYATSKANGGDAFVYRIHTDRRFV
DVIGTLGKHFRTHNEYEHAAAGFISYNQIHSWVRIEPGMSLDQFVDAASDEVKAGVQFIANEDYDSEKYENQLGI
GPQYQLAGFPKSSESWKDEVYKEYRDQKVSSHFAKLVLDTLCDGDQRCFKELLPHESLTPNKASRLVCYQME*
Coding >Hirsu2|5825
ATGAAAAGTTATTGGCTTCAGCTGCTGTGGACCAGCGTCCTGCTCATTGGCATTGTCCAAGGACTGCTCTCGCCA
GACGACCAGCTCTCACAAAGCGCCGGAAAAAGTCACGATAAGAGGCAAATTCAGGGGTTCATAAGTACCTTGCGG
CATATCTCAAAGCCATCGTTCGTATGGCGTGGCGAATTTGGCAGGACACCGGAGGACATTAAAGCGGCACACGGC
TTCTACGCGCGAGGTTTCCAGAAAGCAATGAAGGGCGAGACATTTACACCTAAAGAAAGAGAAGAGGGCGCCAGC
TTATATCACCATACCACAACCCTTACATCGCAGTACACCAAGTGGGTGTCGACGAGTTCCAGCCCAACGGTTGCC
TTCAATTACGCCACGAGTAAAGCAAACGGCGGGGACGCGTTTGTTTACCGTATACACACCGATAGAAGATTCGTC
GATGTTATCGGCACTCTTGGTAAACATTTTCGCACCCACAACGAATACGAGCACGCCGCTGCGGGTTTCATTAGC
TACAACCAAATTCACAGCTGGGTTCGAATCGAACCGGGCATGAGCTTGGATCAGTTCGTCGATGCTGCGAGTGAC
GAGGTAAAAGCCGGTGTACAGTTCATTGCAAACGAGGACTATGACAGCGAAAAATATGAGAACCAGCTCGGTATC
GGACCTCAATATCAACTTGCTGGGTTTCCCAAGTCCTCTGAGTCTTGGAAAGATGAAGTTTACAAGGAGTATCGA
GACCAGAAGGTATCGAGTCATTTTGCCAAATTGGTCTTGGACACCTTGTGTGACGGGGACCAGAGGTGTTTCAAG
GAACTTTTGCCACATGAGTCCCTCACGCCCAACAAAGCATCAAGACTTGTTTGCTATCAGATGGAATAG
Transcript >Hirsu2|5825
ATGAAAAGTTATTGGCTTCAGCTGCTGTGGACCAGCGTCCTGCTCATTGGCATTGTCCAAGGACTGCTCTCGCCA
GACGACCAGCTCTCACAAAGCGCCGGAAAAAGTCACGATAAGAGGCAAATTCAGGGGTTCATAAGTACCTTGCGG
CATATCTCAAAGCCATCGTTCGTATGGCGTGGCGAATTTGGCAGGACACCGGAGGACATTAAAGCGGCACACGGC
TTCTACGCGCGAGGTTTCCAGAAAGCAATGAAGGGCGAGACATTTACACCTAAAGAAAGAGAAGAGGGCGCCAGC
TTATATCACCATACCACAACCCTTACATCGCAGTACACCAAGTGGGTGTCGACGAGTTCCAGCCCAACGGTTGCC
TTCAATTACGCCACGAGTAAAGCAAACGGCGGGGACGCGTTTGTTTACCGTATACACACCGATAGAAGATTCGTC
GATGTTATCGGCACTCTTGGTAAACATTTTCGCACCCACAACGAATACGAGCACGCCGCTGCGGGTTTCATTAGC
TACAACCAAATTCACAGCTGGGTTCGAATCGAACCGGGCATGAGCTTGGATCAGTTCGTCGATGCTGCGAGTGAC
GAGGTAAAAGCCGGTGTACAGTTCATTGCAAACGAGGACTATGACAGCGAAAAATATGAGAACCAGCTCGGTATC
GGACCTCAATATCAACTTGCTGGGTTTCCCAAGTCCTCTGAGTCTTGGAAAGATGAAGTTTACAAGGAGTATCGA
GACCAGAAGGTATCGAGTCATTTTGCCAAATTGGTCTTGGACACCTTGTGTGACGGGGACCAGAGGTGTTTCAAG
GAACTTTTGCCACATGAGTCCCTCACGCCCAACAAAGCATCAAGACTTGTTTGCTATCAGATGGAATAG
Gene >Hirsu2|5825
ATGAAAAGTTATTGGCTTCAGCTGCTGTGGACCAGCGTCCTGCTCATTGGCATTGTCCAAGGACTGCTCTCGCCA
GACGACCAGCTCTCACAAAGCGCCGGAAAAAGTCACGATAAGAGGCAAATTCAGGGGTTCATAAGTACCTTGCGG
CATATCTCAAAGCCATCGTTCGTATGGCGTGGCGAATTTGGCAGGACACCGGAGGACATTAAAGCGGCACACGGC
TTCTACGCGCGAGGTTTCCAGAAAGCAATGAAGGGCGAGACATTTACACCTAAAGAAAGAGAAGAGGGCGCCAGC
TTATATCACCATACCACAACCCTTACATCGCAGTACACCAAGTGGGTGTCGACGAGTTCCAGCCCAACGGTTGCC
TTCAATTACGCCACGAGTAAAGCAAACGGCGGGGACGCGTTTGTTTACCGTATACACACCGATAGAAGATTCGTC
GATGTTATCGGCACTCTTGGTAAACATTTTCGCACCCACAACGAATACGAGCACGCCGCTGCGGGTTTCATTAGC
TACAACCAAATTCACAGCTGGGTTCGAATCGAACCGGGCATGAGCTTGGATCAGTTCGTCGATGCTGCGAGTGAC
GAGGTAAAAGCCGGTGTACAGTTCATTGCAAACGAGGACTATGACAGCGAAAAATATGAGAACCAGCTCGGTATC
GGACCTCAATATCAACTTGCTGGGTTTCCCAAGTCCTCTGAGTCTTGGAAAGATGAAGTTTACAAGGAGTATCGA
GACCAGAAGGTATCGAGTCATTTTGCCAAATTGGTCTTGGACACCTTGTGTGACGGGGACCAGAGGTGTTTCAAG
GAACTTTTGCCACATGAGTCCCTCACGCCCAACAAAGCATCAAGACTTGTTTGCTATCAGATGGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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