Protein ID | Hirsu2|5825 |
Gene name | |
Location | Contig_294:23396..24290 |
Strand | - |
Gene length (bp) | 894 |
Transcript length (bp) | 894 |
Coding sequence length (bp) | 894 |
Protein length (aa) | 298 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 8.0E-24 | 65 | 271 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P13810|E2AA_ECOLX | Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 | 65 | 278 | 2.0E-09 |
sp|P43528|E2BA_ECOLX | Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 | 41 | 267 | 2.0E-07 |
sp|P06717|ELAP_ECOLX | Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 | 65 | 297 | 5.0E-07 |
sp|P43530|ELAH_ECOH1 | Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 | 65 | 271 | 6.0E-07 |
sp|P01555|CHTA_VIBCH | Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 | 65 | 244 | 6.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0090729 | toxin activity | Yes |
GO:0005615 | extracellular space | Yes |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.169 | 0.0775 | 0.9076 | 0.0955 | 0.0616 | 0.0268 | 0.4047 | 0.4005 | 0.2697 | 0.0045 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.999761 |
Orthofinder run ID | 4 |
Orthogroup | 288 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5825 MKSYWLQLLWTSVLLIGIVQGLLSPDDQLSQSAGKSHDKRQIQGFISTLRHISKPSFVWRGEFGRTPEDIKAAHG FYARGFQKAMKGETFTPKEREEGASLYHHTTTLTSQYTKWVSTSSSPTVAFNYATSKANGGDAFVYRIHTDRRFV DVIGTLGKHFRTHNEYEHAAAGFISYNQIHSWVRIEPGMSLDQFVDAASDEVKAGVQFIANEDYDSEKYENQLGI GPQYQLAGFPKSSESWKDEVYKEYRDQKVSSHFAKLVLDTLCDGDQRCFKELLPHESLTPNKASRLVCYQME* |
Coding | >Hirsu2|5825 ATGAAAAGTTATTGGCTTCAGCTGCTGTGGACCAGCGTCCTGCTCATTGGCATTGTCCAAGGACTGCTCTCGCCA GACGACCAGCTCTCACAAAGCGCCGGAAAAAGTCACGATAAGAGGCAAATTCAGGGGTTCATAAGTACCTTGCGG CATATCTCAAAGCCATCGTTCGTATGGCGTGGCGAATTTGGCAGGACACCGGAGGACATTAAAGCGGCACACGGC TTCTACGCGCGAGGTTTCCAGAAAGCAATGAAGGGCGAGACATTTACACCTAAAGAAAGAGAAGAGGGCGCCAGC TTATATCACCATACCACAACCCTTACATCGCAGTACACCAAGTGGGTGTCGACGAGTTCCAGCCCAACGGTTGCC TTCAATTACGCCACGAGTAAAGCAAACGGCGGGGACGCGTTTGTTTACCGTATACACACCGATAGAAGATTCGTC GATGTTATCGGCACTCTTGGTAAACATTTTCGCACCCACAACGAATACGAGCACGCCGCTGCGGGTTTCATTAGC TACAACCAAATTCACAGCTGGGTTCGAATCGAACCGGGCATGAGCTTGGATCAGTTCGTCGATGCTGCGAGTGAC GAGGTAAAAGCCGGTGTACAGTTCATTGCAAACGAGGACTATGACAGCGAAAAATATGAGAACCAGCTCGGTATC GGACCTCAATATCAACTTGCTGGGTTTCCCAAGTCCTCTGAGTCTTGGAAAGATGAAGTTTACAAGGAGTATCGA GACCAGAAGGTATCGAGTCATTTTGCCAAATTGGTCTTGGACACCTTGTGTGACGGGGACCAGAGGTGTTTCAAG GAACTTTTGCCACATGAGTCCCTCACGCCCAACAAAGCATCAAGACTTGTTTGCTATCAGATGGAATAG |
Transcript | >Hirsu2|5825 ATGAAAAGTTATTGGCTTCAGCTGCTGTGGACCAGCGTCCTGCTCATTGGCATTGTCCAAGGACTGCTCTCGCCA GACGACCAGCTCTCACAAAGCGCCGGAAAAAGTCACGATAAGAGGCAAATTCAGGGGTTCATAAGTACCTTGCGG CATATCTCAAAGCCATCGTTCGTATGGCGTGGCGAATTTGGCAGGACACCGGAGGACATTAAAGCGGCACACGGC TTCTACGCGCGAGGTTTCCAGAAAGCAATGAAGGGCGAGACATTTACACCTAAAGAAAGAGAAGAGGGCGCCAGC TTATATCACCATACCACAACCCTTACATCGCAGTACACCAAGTGGGTGTCGACGAGTTCCAGCCCAACGGTTGCC TTCAATTACGCCACGAGTAAAGCAAACGGCGGGGACGCGTTTGTTTACCGTATACACACCGATAGAAGATTCGTC GATGTTATCGGCACTCTTGGTAAACATTTTCGCACCCACAACGAATACGAGCACGCCGCTGCGGGTTTCATTAGC TACAACCAAATTCACAGCTGGGTTCGAATCGAACCGGGCATGAGCTTGGATCAGTTCGTCGATGCTGCGAGTGAC GAGGTAAAAGCCGGTGTACAGTTCATTGCAAACGAGGACTATGACAGCGAAAAATATGAGAACCAGCTCGGTATC GGACCTCAATATCAACTTGCTGGGTTTCCCAAGTCCTCTGAGTCTTGGAAAGATGAAGTTTACAAGGAGTATCGA GACCAGAAGGTATCGAGTCATTTTGCCAAATTGGTCTTGGACACCTTGTGTGACGGGGACCAGAGGTGTTTCAAG GAACTTTTGCCACATGAGTCCCTCACGCCCAACAAAGCATCAAGACTTGTTTGCTATCAGATGGAATAG |
Gene | >Hirsu2|5825 ATGAAAAGTTATTGGCTTCAGCTGCTGTGGACCAGCGTCCTGCTCATTGGCATTGTCCAAGGACTGCTCTCGCCA GACGACCAGCTCTCACAAAGCGCCGGAAAAAGTCACGATAAGAGGCAAATTCAGGGGTTCATAAGTACCTTGCGG CATATCTCAAAGCCATCGTTCGTATGGCGTGGCGAATTTGGCAGGACACCGGAGGACATTAAAGCGGCACACGGC TTCTACGCGCGAGGTTTCCAGAAAGCAATGAAGGGCGAGACATTTACACCTAAAGAAAGAGAAGAGGGCGCCAGC TTATATCACCATACCACAACCCTTACATCGCAGTACACCAAGTGGGTGTCGACGAGTTCCAGCCCAACGGTTGCC TTCAATTACGCCACGAGTAAAGCAAACGGCGGGGACGCGTTTGTTTACCGTATACACACCGATAGAAGATTCGTC GATGTTATCGGCACTCTTGGTAAACATTTTCGCACCCACAACGAATACGAGCACGCCGCTGCGGGTTTCATTAGC TACAACCAAATTCACAGCTGGGTTCGAATCGAACCGGGCATGAGCTTGGATCAGTTCGTCGATGCTGCGAGTGAC GAGGTAAAAGCCGGTGTACAGTTCATTGCAAACGAGGACTATGACAGCGAAAAATATGAGAACCAGCTCGGTATC GGACCTCAATATCAACTTGCTGGGTTTCCCAAGTCCTCTGAGTCTTGGAAAGATGAAGTTTACAAGGAGTATCGA GACCAGAAGGTATCGAGTCATTTTGCCAAATTGGTCTTGGACACCTTGTGTGACGGGGACCAGAGGTGTTTCAAG GAACTTTTGCCACATGAGTCCCTCACGCCCAACAAAGCATCAAGACTTGTTTGCTATCAGATGGAATAG |