© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5806 |
| Gene name | |
| Location | Contig_293:9084..9402 |
| Strand | + |
| Gene length (bp) | 318 |
| Transcript length (bp) | 318 |
| Coding sequence length (bp) | 318 |
| Protein length (aa) | 106 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0793 | 0.0465 | 0.9804 | 0.0641 | 0.0957 | 0.0034 | 0.0854 | 0.0366 | 0.0429 | 0.0023 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 17 | 0.999714 |
| Orthofinder run ID | 4 |
| Orthogroup | 7071 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|159 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|2584 |
| Ophiocordyceps subramaniannii | Hirsu2|5806 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5806 MKIATAILVLAAGLAAANPALDKRRPSGTDPLPPPEGNPRARPAPPRPAPAPDMNAQLADLERLQQEAEQLQNQF RQEFRPGEQGGGQGGGGGAGQGGRNPCAIL* |
| Coding | >Hirsu2|5806 ATGAAGATCGCGACAGCCATCCTCGTCCTCGCCGCCGGCCTGGCGGCCGCCAATCCTGCGCTCGACAAGCGACGG CCGTCGGGCACGGATCCGCTTCCACCGCCGGAGGGCAACCCCCGCGCGAGGCCGGCGCCCCCCCGACCGGCGCCG GCGCCGGACATGAATGCCCAACTGGCCGACTTGGAACGGTTGCAGCAGGAGGCAGAGCAGCTGCAAAACCAATTC AGGCAAGAATTTCGGCCCGGCGAACAAGGCGGCGGCCAAGGCGGAGGCGGCGGCGCGGGACAGGGGGGCAGGAAC CCGTGTGCTATACTGTAG |
| Transcript | >Hirsu2|5806 ATGAAGATCGCGACAGCCATCCTCGTCCTCGCCGCCGGCCTGGCGGCCGCCAATCCTGCGCTCGACAAGCGACGG CCGTCGGGCACGGATCCGCTTCCACCGCCGGAGGGCAACCCCCGCGCGAGGCCGGCGCCCCCCCGACCGGCGCCG GCGCCGGACATGAATGCCCAACTGGCCGACTTGGAACGGTTGCAGCAGGAGGCAGAGCAGCTGCAAAACCAATTC AGGCAAGAATTTCGGCCCGGCGAACAAGGCGGCGGCCAAGGCGGAGGCGGCGGCGCGGGACAGGGGGGCAGGAAC CCGTGTGCTATACTGTAG |
| Gene | >Hirsu2|5806 ATGAAGATCGCGACAGCCATCCTCGTCCTCGCCGCCGGCCTGGCGGCCGCCAATCCTGCGCTCGACAAGCGACGG CCGTCGGGCACGGATCCGCTTCCACCGCCGGAGGGCAACCCCCGCGCGAGGCCGGCGCCCCCCCGACCGGCGCCG GCGCCGGACATGAATGCCCAACTGGCCGACTTGGAACGGTTGCAGCAGGAGGCAGAGCAGCTGCAAAACCAATTC AGGCAAGAATTTCGGCCCGGCGAACAAGGCGGCGGCCAAGGCGGAGGCGGCGGCGCGGGACAGGGGGGCAGGAAC CCGTGTGCTATACTGTAG |