Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5805
Gene name
LocationContig_293:7632..8296
Strand+
Gene length (bp)664
Transcript length (bp)588
Coding sequence length (bp)588
Protein length (aa) 196

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1664 0.1517 0.9321 0.076 0.0572 0.0529 0.1703 0.0713 0.1106 0.0075

SignalP

SignalP signal predicted Location Score
Yes 1 - 25 0.999633

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4838
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|158
Ophiocordyceps australis 1348a (Ghana) OphauG2|2970
Ophiocordyceps australis 1348a (Ghana) OphauG2|6158
Ophiocordyceps australis map64 (Brazil) OphauB2|2583
Ophiocordyceps subramaniannii Hirsu2|10799
Ophiocordyceps subramaniannii Hirsu2|5805 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5805
MKGRHITLPTLQFAAAAFVIAAAQAEEADKDVDVTYCVDHARQVVDSTNCDGTRPLGKYFFARGAYEEDEPVGAN
LTVAPNYHIDSSDIEARLAHRLEESGLVTRSGFGKRDIAGGLFPRACDPPGGSRGSGGSGGNGGTRVKVGASTGS
DDVQTQNYITDSKHEADKLGGKQCYASIARHRSALHEHHDFFLAS*
Coding >Hirsu2|5805
ATGAAGGGCAGACACATCACTCTCCCGACTCTGCAATTCGCAGCCGCGGCCTTCGTCATAGCAGCGGCCCAGGCA
GAAGAGGCTGACAAGGACGTGGACGTGACCTACTGCGTCGACCATGCTAGACAGGTCGTGGATTCAACAAACTGC
GACGGCACAAGGCCTCTTGGGAAATACTTCTTCGCCAGGGGTGCTTATGAAGAGGATGAGCCGGTCGGAGCCAAT
CTCACGGTGGCGCCCAACTACCACATTGATAGCTCAGACATAGAAGCTCGTCTGGCTCACAGGCTGGAAGAAAGT
GGGCTCGTTACTAGGAGCGGCTTTGGAAAGAGGGACATCGCAGGCGGGCTGTTTCCTCGAGCCTGTGATCCGCCT
GGGGGGAGCCGTGGAAGTGGTGGGAGTGGTGGGAATGGTGGGACTCGGGTTAAGGTTGGGGCATCTACGGGGAGT
GACGATGTGCAGACGCAAAACTACATCACAGACAGCAAACATGAGGCCGACAAGCTCGGCGGGAAGCAGTGCTAC
GCTTCCATTGCCCGCCACCGTTCCGCCCTGCATGAGCATCATGACTTCTTTCTGGCCAGCTAG
Transcript >Hirsu2|5805
ATGAAGGGCAGACACATCACTCTCCCGACTCTGCAATTCGCAGCCGCGGCCTTCGTCATAGCAGCGGCCCAGGCA
GAAGAGGCTGACAAGGACGTGGACGTGACCTACTGCGTCGACCATGCTAGACAGGTCGTGGATTCAACAAACTGC
GACGGCACAAGGCCTCTTGGGAAATACTTCTTCGCCAGGGGTGCTTATGAAGAGGATGAGCCGGTCGGAGCCAAT
CTCACGGTGGCGCCCAACTACCACATTGATAGCTCAGACATAGAAGCTCGTCTGGCTCACAGGCTGGAAGAAAGT
GGGCTCGTTACTAGGAGCGGCTTTGGAAAGAGGGACATCGCAGGCGGGCTGTTTCCTCGAGCCTGTGATCCGCCT
GGGGGGAGCCGTGGAAGTGGTGGGAGTGGTGGGAATGGTGGGACTCGGGTTAAGGTTGGGGCATCTACGGGGAGT
GACGATGTGCAGACGCAAAACTACATCACAGACAGCAAACATGAGGCCGACAAGCTCGGCGGGAAGCAGTGCTAC
GCTTCCATTGCCCGCCACCGTTCCGCCCTGCATGAGCATCATGACTTCTTTCTGGCCAGCTAG
Gene >Hirsu2|5805
ATGAAGGGCAGACACATCACTCTCCCGACTCTGCAATTCGCAGCCGCGGCCTTCGTCATAGCAGCGGCCCAGGCA
GAAGAGGCTGACAAGGACGTGGACGTGACCTACTGCGTCGACCATGCTAGACAGGTCGTGGATTCAACAAACTGC
GACGGCACAAGGCCTCTTGGGAAATACTTCTTCGCCAGGGGTGCTTATGAAGAGGATGAGCCGGTCGGAGCCAAT
CTCACGGTGGCGCCCAACTACCACATTGATAGCTCAGACATAGAAGCTCGTCTGGCTCACAGGCTGGAAGAAAGT
GGGCTCGTTACTAGGAGCGGCTTTGGAAAGAGGGACATCGCAGGCGGGCTGTTTCCTCGAGCCTGTGATCCGCCT
GGGGGGAGCCGTGGAAGTGGTGGGAGTGGTGGGAATGGTGGGACTCGGGTTAAGGTTGGGGGTTAAAGGCCGCGG
ATCTGTAGACTTTCTGCGGTAAATGAGATTTGCATCAGAGCGACTTGACTACATACATGTAGCATCTACGGGGAG
TGACGATGTGCAGACGCAAAACTACATCACAGACAGCAAACATGAGGCCGACAAGCTCGGCGGGAAGCAGTGCTA
CGCTTCCATTGCCCGCCACCGTTCCGCCCTGCATGAGCATCATGACTTCTTTCTGGCCAGCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail