Protein ID | Hirsu2|5778 |
Gene name | |
Location | Contig_291:19399..20067 |
Strand | - |
Gene length (bp) | 668 |
Transcript length (bp) | 537 |
Coding sequence length (bp) | 537 |
Protein length (aa) | 179 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1242 | 0.0656 | 0.9429 | 0.1435 | 0.057 | 0.008 | 0.2046 | 0.2145 | 0.1247 | 0.0018 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.999772 |
Orthofinder run ID | 4 |
Orthogroup | 3210 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5778 MRVLATVVLSVLAGLASLTRATEGGDYKAAACPTVTSTAEVCHTCALLKCLAIETISLRKECPLPVATKTTSYPC RGKKCPAGCGATSYVTVTPSPPASACPTVTSTGSVCSTCVRPQCVIAKTIGCQEGCPAPVPTVHTEMRCGGRCPG GCGTFYVYETSGCEGKPTPTPGPEYGDE* |
Coding | >Hirsu2|5778 ATGCGTGTCTTGGCCACAGTGGTTCTATCCGTCCTTGCCGGACTTGCGTCCCTGACACGGGCAACCGAAGGCGGC GACTACAAGGCAGCGGCATGCCCGACGGTCACGTCGACGGCCGAGGTGTGCCATACGTGCGCGCTGCTGAAATGC CTGGCCATCGAGACCATCTCGCTGCGCAAGGAGTGCCCGCTGCCGGTGGCGACGAAGACGACATCGTACCCGTGC CGCGGCAAGAAGTGTCCCGCGGGCTGCGGCGCGACGTCGTACGTGACGGTGACGCCGTCGCCGCCGGCCTCTGCG TGTCCGACGGTGACGTCGACGGGAAGCGTGTGCTCGACCTGCGTGCGGCCCCAGTGCGTCATCGCAAAGACCATC GGCTGCCAGGAGGGGTGCCCGGCGCCGGTGCCGACCGTGCACACCGAGATGAGGTGCGGCGGACGGTGCCCCGGC GGCTGCGGCACCTTTTACGTCTATGAGACGTCTGGCTGCGAAGGGAAGCCGACGCCGACTCCGGGTCCGGAGTAC GGCGACGAGTAA |
Transcript | >Hirsu2|5778 ATGCGTGTCTTGGCCACAGTGGTTCTATCCGTCCTTGCCGGACTTGCGTCCCTGACACGGGCAACCGAAGGCGGC GACTACAAGGCAGCGGCATGCCCGACGGTCACGTCGACGGCCGAGGTGTGCCATACGTGCGCGCTGCTGAAATGC CTGGCCATCGAGACCATCTCGCTGCGCAAGGAGTGCCCGCTGCCGGTGGCGACGAAGACGACATCGTACCCGTGC CGCGGCAAGAAGTGTCCCGCGGGCTGCGGCGCGACGTCGTACGTGACGGTGACGCCGTCGCCGCCGGCCTCTGCG TGTCCGACGGTGACGTCGACGGGAAGCGTGTGCTCGACCTGCGTGCGGCCCCAGTGCGTCATCGCAAAGACCATC GGCTGCCAGGAGGGGTGCCCGGCGCCGGTGCCGACCGTGCACACCGAGATGAGGTGCGGCGGACGGTGCCCCGGC GGCTGCGGCACCTTTTACGTCTATGAGACGTCTGGCTGCGAAGGGAAGCCGACGCCGACTCCGGGTCCGGAGTAC GGCGACGAGTAA |
Gene | >Hirsu2|5778 ATGCGTGTCTTGGCCACAGTGGTTCTATCCGTCCTTGCCGGGTAGGACTTGTCTCTTTACCCTTTTCTTCCCATT GCCCTCGTAGGGCGCCTCTTTCCTCTGATGGATCGGGCTGTGCGCAGGCAAAAGACGGTCAAGGATCCGACTGCT AACCGGGGAGAAAAATGTCAAGACTTGCGTCCCTGACACGGGCAACCGAAGGCGGCGACTACAAGGCAGCGGCAT GCCCGACGGTCACGTCGACGGCCGAGGTGTGCCATACGTGCGCGCTGCTGAAATGCCTGGCCATCGAGACCATCT CGCTGCGCAAGGAGTGCCCGCTGCCGGTGGCGACGAAGACGACATCGTACCCGTGCCGCGGCAAGAAGTGTCCCG CGGGCTGCGGCGCGACGTCGTACGTGACGGTGACGCCGTCGCCGCCGGCCTCTGCGTGTCCGACGGTGACGTCGA CGGGAAGCGTGTGCTCGACCTGCGTGCGGCCCCAGTGCGTCATCGCAAAGACCATCGGCTGCCAGGAGGGGTGCC CGGCGCCGGTGCCGACCGTGCACACCGAGATGAGGTGCGGCGGACGGTGCCCCGGCGGCTGCGGCACCTTTTACG TCTATGAGACGTCTGGCTGCGAAGGGAAGCCGACGCCGACTCCGGGTCCGGAGTACGGCGACGAGTAA |