Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5778
Gene name
LocationContig_291:19399..20067
Strand-
Gene length (bp)668
Transcript length (bp)537
Coding sequence length (bp)537
Protein length (aa) 179

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1242 0.0656 0.9429 0.1435 0.057 0.008 0.2046 0.2145 0.1247 0.0018

SignalP

SignalP signal predicted Location Score
Yes 1 - 21 0.999772

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3210
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2063
Ophiocordyceps australis map64 (Brazil) OphauB2|4748
Ophiocordyceps camponoti-floridani Ophcf2|00451
Ophiocordyceps camponoti-floridani Ophcf2|03733
Ophiocordyceps camponoti-rufipedis Ophun1|4711
Ophiocordyceps kimflemingae Ophio5|3388
Ophiocordyceps subramaniannii Hirsu2|5778 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5778
MRVLATVVLSVLAGLASLTRATEGGDYKAAACPTVTSTAEVCHTCALLKCLAIETISLRKECPLPVATKTTSYPC
RGKKCPAGCGATSYVTVTPSPPASACPTVTSTGSVCSTCVRPQCVIAKTIGCQEGCPAPVPTVHTEMRCGGRCPG
GCGTFYVYETSGCEGKPTPTPGPEYGDE*
Coding >Hirsu2|5778
ATGCGTGTCTTGGCCACAGTGGTTCTATCCGTCCTTGCCGGACTTGCGTCCCTGACACGGGCAACCGAAGGCGGC
GACTACAAGGCAGCGGCATGCCCGACGGTCACGTCGACGGCCGAGGTGTGCCATACGTGCGCGCTGCTGAAATGC
CTGGCCATCGAGACCATCTCGCTGCGCAAGGAGTGCCCGCTGCCGGTGGCGACGAAGACGACATCGTACCCGTGC
CGCGGCAAGAAGTGTCCCGCGGGCTGCGGCGCGACGTCGTACGTGACGGTGACGCCGTCGCCGCCGGCCTCTGCG
TGTCCGACGGTGACGTCGACGGGAAGCGTGTGCTCGACCTGCGTGCGGCCCCAGTGCGTCATCGCAAAGACCATC
GGCTGCCAGGAGGGGTGCCCGGCGCCGGTGCCGACCGTGCACACCGAGATGAGGTGCGGCGGACGGTGCCCCGGC
GGCTGCGGCACCTTTTACGTCTATGAGACGTCTGGCTGCGAAGGGAAGCCGACGCCGACTCCGGGTCCGGAGTAC
GGCGACGAGTAA
Transcript >Hirsu2|5778
ATGCGTGTCTTGGCCACAGTGGTTCTATCCGTCCTTGCCGGACTTGCGTCCCTGACACGGGCAACCGAAGGCGGC
GACTACAAGGCAGCGGCATGCCCGACGGTCACGTCGACGGCCGAGGTGTGCCATACGTGCGCGCTGCTGAAATGC
CTGGCCATCGAGACCATCTCGCTGCGCAAGGAGTGCCCGCTGCCGGTGGCGACGAAGACGACATCGTACCCGTGC
CGCGGCAAGAAGTGTCCCGCGGGCTGCGGCGCGACGTCGTACGTGACGGTGACGCCGTCGCCGCCGGCCTCTGCG
TGTCCGACGGTGACGTCGACGGGAAGCGTGTGCTCGACCTGCGTGCGGCCCCAGTGCGTCATCGCAAAGACCATC
GGCTGCCAGGAGGGGTGCCCGGCGCCGGTGCCGACCGTGCACACCGAGATGAGGTGCGGCGGACGGTGCCCCGGC
GGCTGCGGCACCTTTTACGTCTATGAGACGTCTGGCTGCGAAGGGAAGCCGACGCCGACTCCGGGTCCGGAGTAC
GGCGACGAGTAA
Gene >Hirsu2|5778
ATGCGTGTCTTGGCCACAGTGGTTCTATCCGTCCTTGCCGGGTAGGACTTGTCTCTTTACCCTTTTCTTCCCATT
GCCCTCGTAGGGCGCCTCTTTCCTCTGATGGATCGGGCTGTGCGCAGGCAAAAGACGGTCAAGGATCCGACTGCT
AACCGGGGAGAAAAATGTCAAGACTTGCGTCCCTGACACGGGCAACCGAAGGCGGCGACTACAAGGCAGCGGCAT
GCCCGACGGTCACGTCGACGGCCGAGGTGTGCCATACGTGCGCGCTGCTGAAATGCCTGGCCATCGAGACCATCT
CGCTGCGCAAGGAGTGCCCGCTGCCGGTGGCGACGAAGACGACATCGTACCCGTGCCGCGGCAAGAAGTGTCCCG
CGGGCTGCGGCGCGACGTCGTACGTGACGGTGACGCCGTCGCCGCCGGCCTCTGCGTGTCCGACGGTGACGTCGA
CGGGAAGCGTGTGCTCGACCTGCGTGCGGCCCCAGTGCGTCATCGCAAAGACCATCGGCTGCCAGGAGGGGTGCC
CGGCGCCGGTGCCGACCGTGCACACCGAGATGAGGTGCGGCGGACGGTGCCCCGGCGGCTGCGGCACCTTTTACG
TCTATGAGACGTCTGGCTGCGAAGGGAAGCCGACGCCGACTCCGGGTCCGGAGTACGGCGACGAGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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