Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5773
Gene name
LocationContig_2906:242..717
Strand-
Gene length (bp)475
Transcript length (bp)423
Coding sequence length (bp)423
Protein length (aa) 141

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q5K8R6|CXT1_CRYNJ Beta-1,2-xylosyltransferase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CXT1 PE=1 SV=1 45 131 2.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 7 25 18

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5773
MKRPRQRLTALVAAVTLVAFLGAYVRLGDGPGRRLYPMEGLLRRPETAADATSSSDDDGPLSKQMADSGLHPIAF
LVRQSEREFDEMRARQSRTLREAVAEYRRRYGIPPPPLFDKWFEFATANGVQLVDERSGPASNWP*
Coding >Hirsu2|5773
ATGAAGCGGCCTCGGCAACGGCTGACCGCCCTCGTCGCCGCCGTCACGCTCGTCGCCTTCTTGGGCGCCTACGTC
CGCCTCGGCGACGGGCCGGGCCGACGTCTCTACCCGATGGAGGGCCTGCTGCGGCGCCCCGAGACGGCGGCGGAT
GCGACGTCGAGCAGCGACGATGATGGGCCGCTGTCGAAACAGATGGCCGACTCGGGCCTGCACCCCATCGCCTTC
CTCGTCCGCCAGTCGGAGCGCGAGTTCGACGAGATGCGGGCGCGGCAGTCCCGCACCCTGCGCGAGGCCGTGGCC
GAGTACCGCCGCCGCTACGGCATCCCGCCGCCGCCGCTCTTCGACAAGTGGTTCGAGTTCGCGACGGCCAACGGG
GTGCAGCTGGTCGACGAACGATCCGGGCCCGCCTCAAACTGGCCCTGA
Transcript >Hirsu2|5773
ATGAAGCGGCCTCGGCAACGGCTGACCGCCCTCGTCGCCGCCGTCACGCTCGTCGCCTTCTTGGGCGCCTACGTC
CGCCTCGGCGACGGGCCGGGCCGACGTCTCTACCCGATGGAGGGCCTGCTGCGGCGCCCCGAGACGGCGGCGGAT
GCGACGTCGAGCAGCGACGATGATGGGCCGCTGTCGAAACAGATGGCCGACTCGGGCCTGCACCCCATCGCCTTC
CTCGTCCGCCAGTCGGAGCGCGAGTTCGACGAGATGCGGGCGCGGCAGTCCCGCACCCTGCGCGAGGCCGTGGCC
GAGTACCGCCGCCGCTACGGCATCCCGCCGCCGCCGCTCTTCGACAAGTGGTTCGAGTTCGCGACGGCCAACGGG
GTGCAGCTGGTCGACGAACGATCCGGGCCCGCCTCAAACTGGCCCTGA
Gene >Hirsu2|5773
ATGAAGCGGCCTCGGCAACGGCTGACCGCCCTCGTCGCCGCCGTCACGCTCGTCGCCTTCTTGGGCGCCTACGTC
CGCCTCGGCGACGGGCCGGGCCGACGTCTCTACCCGATGGAGGGCCTGCTGCGGCGCCCCGAGACGGCGGCGGAT
GCGACGTCGAGCAGCGACGATGATGGGCCGCTGTCGAAACAGATGGCCGACTCGGGCCTGCACCCCATCGCCTTC
CTCGTCCGCCAGTCGGAGCGCGAGTTCGACGAGATGCGGGCGCGGCAGTCCCGCACCCTGCGCGAGGCCGTGGCC
GAGTACCGCCGCCGCTACGGCATCCCGCCGCCGCCGCTCTTCGACAAGTGGTTCGAGTTCGCGACGGCCAACGGG
GTGCAGCTGGTCGACGAGTTCGACACGGTCCACCAGCAGCTGCTGCCCTTCTGGGGCATGCGGCCCGAGACGATC
CGGGCCCGCCTCAAACTGGCCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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