© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|577 |
| Gene name | |
| Location | Contig_1113:866..2697 |
| Strand | - |
| Gene length (bp) | 1831 |
| Transcript length (bp) | 1686 |
| Coding sequence length (bp) | 1686 |
| Protein length (aa) | 562 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01302 | CAP_GLY | CAP-Gly domain | 7.3E-20 | 7 | 73 |
| PF13516 | LRR_6 | Leucine Rich repeat | 1.2E+00 | 314 | 326 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8CIV8|TBCE_MOUSE | Tubulin-specific chaperone E OS=Mus musculus GN=Tbce PE=1 SV=1 | 1 | 501 | 3.0E-57 |
| sp|Q5FVQ9|TBCE_RAT | Tubulin-specific chaperone E OS=Rattus norvegicus GN=Tbce PE=2 SV=1 | 1 | 501 | 1.0E-56 |
| sp|Q15813|TBCE_HUMAN | Tubulin-specific chaperone E OS=Homo sapiens GN=TBCE PE=1 SV=1 | 7 | 547 | 5.0E-55 |
| sp|Q5RBD9|TBCE_PONAB | Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1 | 7 | 499 | 5.0E-55 |
| sp|Q32KS0|TBCE_BOVIN | Tubulin-specific chaperone E OS=Bos taurus GN=TBCE PE=2 SV=1 | 2 | 499 | 6.0E-55 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8CIV8|TBCE_MOUSE | Tubulin-specific chaperone E OS=Mus musculus GN=Tbce PE=1 SV=1 | 1 | 501 | 3.0E-57 |
| sp|Q5FVQ9|TBCE_RAT | Tubulin-specific chaperone E OS=Rattus norvegicus GN=Tbce PE=2 SV=1 | 1 | 501 | 1.0E-56 |
| sp|Q15813|TBCE_HUMAN | Tubulin-specific chaperone E OS=Homo sapiens GN=TBCE PE=1 SV=1 | 7 | 547 | 5.0E-55 |
| sp|Q5RBD9|TBCE_PONAB | Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1 | 7 | 499 | 5.0E-55 |
| sp|Q32KS0|TBCE_BOVIN | Tubulin-specific chaperone E OS=Bos taurus GN=TBCE PE=2 SV=1 | 2 | 499 | 6.0E-55 |
| sp|Q5U508|TBCE_XENLA | Tubulin-specific chaperone E OS=Xenopus laevis GN=tbce PE=2 SV=1 | 2 | 503 | 2.0E-53 |
| sp|Q5U378|TBCE_DANRE | Tubulin-specific chaperone E OS=Danio rerio GN=tbce PE=2 SV=2 | 7 | 497 | 2.0E-48 |
| sp|Q8GRL7|TBCE_ARATH | Tubulin-folding cofactor E OS=Arabidopsis thaliana GN=TFCE PE=2 SV=1 | 4 | 500 | 2.0E-38 |
| sp|P39937|PAC2_YEAST | Protein PAC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAC2 PE=1 SV=1 | 7 | 501 | 9.0E-31 |
| sp|Q10303|ALP21_SCHPO | Cell polarity protein alp21 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alp21 PE=1 SV=2 | 68 | 437 | 8.0E-24 |
| sp|Q55CN0|TBCE_DICDI | Tubulin-specific chaperone E OS=Dictyostelium discoideum GN=tbce PE=3 SV=1 | 6 | 353 | 1.0E-22 |
| sp|Q5QJ74|TBCEL_HUMAN | Tubulin-specific chaperone cofactor E-like protein OS=Homo sapiens GN=TBCEL PE=1 SV=2 | 80 | 400 | 3.0E-13 |
| sp|Q5PQJ7|TBCEL_RAT | Tubulin-specific chaperone cofactor E-like protein OS=Rattus norvegicus GN=Tbcel PE=1 SV=1 | 80 | 400 | 2.0E-12 |
| sp|Q8C5W3|TBCEL_MOUSE | Tubulin-specific chaperone cofactor E-like protein OS=Mus musculus GN=Tbcel PE=1 SV=1 | 80 | 400 | 9.0E-11 |
| sp|Q01397|DYNA_NEUCR | Dynactin, 150 kDa isoform OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ro-3 PE=3 SV=3 | 7 | 72 | 2.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|577 MTPSPYVGQRISYGGAVCTVRYVGPVAGTTGSWLGIEWDDATRGKHDGSHKGVRYFSCLSRSPTAASFVRPTRPA DKRLSFIAALREKYASEAPQLADGAPIVISGKVAEEMGFDKVRRKLARLDELRVVLLDGMRVASAVDEADGARVA ETCPSIAQLDLSRNLLERLGPVLDICAELPALRHLSLNGNRFQHVADDTSLADDAAKAFGGVDELALGETLLGWE ELCRIASLCPSLRTLAAGANQLSCLPAADYGGLATTLTSINLEYNDFKAVSDLAGLTSLRALRNLHLKGNAIAAM AAPGAAAPTFPPALQYLDVSYNDIRDWAFVDALAAHFPGLTGLRIAHNPVYDGRDAGAEAAVVSWEESYMITIGR LACLRSVNFTQVTAEDRKNAETFYLSRIAKQLAAVPESAEHGVLASHPRYRELCRIHGAPDVIRRSEVNPAFLEA RLVAVRFRREGGPDRAARIPRALDIYSVRAIAGRLFGLSPLRLRLVWETDEWDPVAGYDERDADDDAPHRADGSP GQPGRWLKREVELTHGPKQLGYCVDGMDVRIRVEPS* |
| Coding | >Hirsu2|577 ATGACGCCATCCCCCTACGTCGGGCAGCGCATCTCCTACGGCGGCGCCGTCTGCACCGTCCGCTACGTCGGCCCC GTCGCCGGCACGACGGGCTCCTGGCTCGGCATCGAGTGGGACGACGCGACGCGCGGGAAGCACGACGGATCCCAC AAGGGCGTGCGCTACTTTTCCTGCCTTTCCCGGTCGCCGACGGCCGCCTCGTTCGTCCGCCCGACGCGGCCGGCG GACAAGCGGCTGAGCTTCATCGCCGCGCTGCGGGAAAAGTACGCGTCCGAGGCGCCGCAGCTGGCGGATGGCGCG CCCATCGTCATCTCCGGCAAGGTTGCCGAGGAGATGGGCTTCGACAAGGTGCGCCGCAAGCTGGCCCGGCTGGAC GAGCTCCGGGTCGTCCTGCTGGACGGCATGCGCGTCGCGTCCGCCGTCGACGAGGCCGACGGCGCCCGCGTCGCC GAGACGTGCCCCAGCATCGCCCAGCTCGACCTGAGCCGGAATCTGCTGGAGCGCCTCGGCCCGGTGCTGGACATC TGCGCCGAGCTGCCGGCCCTGCGGCACCTCAGCCTCAATGGGAATCGGTTCCAGCATGTGGCGGACGATACGTCG CTGGCCGATGATGCCGCGAAGGCCTTTGGCGGCGTCGACGAGCTCGCCCTCGGCGAGACCCTGCTCGGCTGGGAG GAGCTGTGCCGGATCGCCTCCCTGTGCCCGTCGCTCCGGACGCTGGCCGCCGGGGCCAACCAGCTCTCGTGCCTG CCGGCGGCCGACTACGGCGGGCTGGCGACGACGCTGACGTCCATCAACCTCGAGTACAACGACTTCAAGGCCGTC TCGGACCTCGCCGGCCTCACCTCCCTGCGCGCCCTCCGAAACCTGCACCTCAAGGGCAACGCGATCGCGGCCATG GCCGCCCCGGGCGCCGCGGCGCCGACCTTCCCGCCGGCGCTGCAATACCTCGACGTGTCCTACAACGACATCCGG GACTGGGCCTTTGTGGACGCCCTCGCCGCGCACTTCCCGGGCCTCACCGGCCTGCGCATCGCCCACAACCCTGTC TACGACGGACGGGACGCCGGGGCCGAGGCCGCCGTCGTCTCCTGGGAGGAATCGTACATGATCACCATCGGGCGC CTGGCCTGCCTGCGGAGCGTCAACTTCACGCAGGTGACGGCCGAGGACCGCAAGAACGCCGAGACATTCTACCTG TCGAGGATCGCCAAGCAGCTGGCGGCGGTGCCCGAGTCGGCCGAGCACGGCGTGCTCGCCTCGCACCCCCGCTAC CGCGAGCTGTGCCGGATCCACGGCGCGCCGGACGTGATCCGGCGCAGCGAGGTCAACCCGGCCTTCCTCGAGGCG CGGCTCGTCGCCGTCCGCTTCCGCCGCGAGGGCGGGCCCGACCGGGCCGCGCGCATCCCCAGGGCCTTGGACATC TACTCGGTCCGCGCCATCGCCGGCCGGCTCTTCGGCCTGTCCCCGCTGCGGCTGCGGCTCGTCTGGGAGACGGAC GAGTGGGACCCCGTCGCCGGCTACGACGAGCGCGACGCCGACGACGACGCGCCGCACCGGGCCGACGGCTCGCCC GGCCAGCCGGGACGCTGGCTCAAGCGCGAGGTGGAGCTCACGCACGGGCCGAAGCAGCTCGGCTACTGCGTCGAC GGCATGGACGTGCGGATCCGCGTGGAACCGAGCTGA |
| Transcript | >Hirsu2|577 ATGACGCCATCCCCCTACGTCGGGCAGCGCATCTCCTACGGCGGCGCCGTCTGCACCGTCCGCTACGTCGGCCCC GTCGCCGGCACGACGGGCTCCTGGCTCGGCATCGAGTGGGACGACGCGACGCGCGGGAAGCACGACGGATCCCAC AAGGGCGTGCGCTACTTTTCCTGCCTTTCCCGGTCGCCGACGGCCGCCTCGTTCGTCCGCCCGACGCGGCCGGCG GACAAGCGGCTGAGCTTCATCGCCGCGCTGCGGGAAAAGTACGCGTCCGAGGCGCCGCAGCTGGCGGATGGCGCG CCCATCGTCATCTCCGGCAAGGTTGCCGAGGAGATGGGCTTCGACAAGGTGCGCCGCAAGCTGGCCCGGCTGGAC GAGCTCCGGGTCGTCCTGCTGGACGGCATGCGCGTCGCGTCCGCCGTCGACGAGGCCGACGGCGCCCGCGTCGCC GAGACGTGCCCCAGCATCGCCCAGCTCGACCTGAGCCGGAATCTGCTGGAGCGCCTCGGCCCGGTGCTGGACATC TGCGCCGAGCTGCCGGCCCTGCGGCACCTCAGCCTCAATGGGAATCGGTTCCAGCATGTGGCGGACGATACGTCG CTGGCCGATGATGCCGCGAAGGCCTTTGGCGGCGTCGACGAGCTCGCCCTCGGCGAGACCCTGCTCGGCTGGGAG GAGCTGTGCCGGATCGCCTCCCTGTGCCCGTCGCTCCGGACGCTGGCCGCCGGGGCCAACCAGCTCTCGTGCCTG CCGGCGGCCGACTACGGCGGGCTGGCGACGACGCTGACGTCCATCAACCTCGAGTACAACGACTTCAAGGCCGTC TCGGACCTCGCCGGCCTCACCTCCCTGCGCGCCCTCCGAAACCTGCACCTCAAGGGCAACGCGATCGCGGCCATG GCCGCCCCGGGCGCCGCGGCGCCGACCTTCCCGCCGGCGCTGCAATACCTCGACGTGTCCTACAACGACATCCGG GACTGGGCCTTTGTGGACGCCCTCGCCGCGCACTTCCCGGGCCTCACCGGCCTGCGCATCGCCCACAACCCTGTC TACGACGGACGGGACGCCGGGGCCGAGGCCGCCGTCGTCTCCTGGGAGGAATCGTACATGATCACCATCGGGCGC CTGGCCTGCCTGCGGAGCGTCAACTTCACGCAGGTGACGGCCGAGGACCGCAAGAACGCCGAGACATTCTACCTG TCGAGGATCGCCAAGCAGCTGGCGGCGGTGCCCGAGTCGGCCGAGCACGGCGTGCTCGCCTCGCACCCCCGCTAC CGCGAGCTGTGCCGGATCCACGGCGCGCCGGACGTGATCCGGCGCAGCGAGGTCAACCCGGCCTTCCTCGAGGCG CGGCTCGTCGCCGTCCGCTTCCGCCGCGAGGGCGGGCCCGACCGGGCCGCGCGCATCCCCAGGGCCTTGGACATC TACTCGGTCCGCGCCATCGCCGGCCGGCTCTTCGGCCTGTCCCCGCTGCGGCTGCGGCTCGTCTGGGAGACGGAC GAGTGGGACCCCGTCGCCGGCTACGACGAGCGCGACGCCGACGACGACGCGCCGCACCGGGCCGACGGCTCGCCC GGCCAGCCGGGACGCTGGCTCAAGCGCGAGGTGGAGCTCACGCACGGGCCGAAGCAGCTCGGCTACTGCGTCGAC GGCATGGACGTGCGGATCCGCGTGGAACCGAGCTGA |
| Gene | >Hirsu2|577 ATGACGCCATCCCCCTACGTCGGGCAGCGCATCTCCTACGGCGGCGCCGTCTGCACCGTCCGCTACGTCGGCCCC GTCGCCGGCACGACGGGCTCCTGGCTCGGCATCGAGTGGGACGACGCGACGCGCGGGAAGCACGACGGATCCCAC AAGGGCGTGCGCTACTTTTCCTGTGCGTCGCCTTGCCGGCCTCCCCCTTCCCTGCCGCCCCCGTCCCGTTTTGCT GAGCAGCGGCCGGCGCAGGCCTTTCCCGGTCGCCGACGGCCGCCTCGTTCGTCCGCCCGACGCGGCCGGCGGACA AGCGGCTGAGCTTCATCGCCGCGCTGCGGGAAAAGTACGCGTCCGAGGCGCCGCAGCTGGCGGATGGCGCGCCCA TCGTCATCTCCGGCAAGGTTGCCGAGGAGATGGGCTTCGACAAGGTGCGCCGCAAGCTGGCCCGGCTGGACGAGC TCCGGGTCGTCCTGCTGGACGGCATGCGCGTCGCGTCCGCCGTCGACGAGGCCGACGGCGCCCGCGTCGCCGAGA CGTGCCCCAGCATCGCCCAGCTCGACCTGAGCCGGAATCTGCTGGAGCGCCTCGGCCCGGTGCTGGACATCTGCG CCGAGCTGCCGGCCCTGCGGCACCTCAGCCTCAAGTACGTGTCCGTCCTGCTGCCGCGCCCGCTCGTCCGGGCCT CGCTGCACATGCTGACCGGGAAGAAAAAATCAGTGGGAATCGGTTCCAGCATGTGGCGGACGATACGTCGCTGGC CGATGATGCCGCGAAGGCCTTTGGCGGCGTCGACGAGCTCGCCCTCGGCGAGACCCTGCTCGGCTGGGAGGAGCT GTGCCGGATCGCCTCCCTGTGCCCGTCGCTCCGGACGCTGGCCGCCGGGGCCAACCAGCTCTCGTGCCTGCCGGC GGCCGACTACGGCGGGCTGGCGACGACGCTGACGTCCATCAACCTCGAGTACAACGACTTCAAGGCCGTCTCGGA CCTCGCCGGCCTCACCTCCCTGCGCGCCCTCCGAAACCTGCACCTCAAGGGCAACGCGATCGCGGCCATGGCCGC CCCGGGCGCCGCGGCGCCGACCTTCCCGCCGGCGCTGCAATACCTCGACGTGTCCTACAACGACATCCGGGACTG GGCCTTTGTGGACGCCCTCGCCGCGCACTTCCCGGGCCTCACCGGCCTGCGCATCGCCCACAACCCTGTCTACGA CGGACGGGACGCCGGGGCCGAGGCCGCCGTCGTCTCCTGGGAGGAATCGTACATGATCACCATCGGGCGCCTGGC CTGCCTGCGGAGCGTCAACTTCACGCAGGTGACGGCCGAGGACCGCAAGAACGCCGAGACATTCTACCTGTCGAG GATCGCCAAGCAGCTGGCGGCGGTGCCCGAGTCGGCCGAGCACGGCGTGCTCGCCTCGCACCCCCGCTACCGCGA GCTGTGCCGGATCCACGGCGCGCCGGACGTGATCCGGCGCAGCGAGGTCAACCCGGCCTTCCTCGAGGCGCGGCT CGTCGCCGTCCGCTTCCGCCGCGAGGGCGGGCCCGACCGGGCCGCGCGCATCCCCAGGGCCTTGGACATCTACTC GGTCCGCGCCATCGCCGGCCGGCTCTTCGGCCTGTCCCCGCTGCGGCTGCGGCTCGTCTGGGAGACGGACGAGTG GGACCCCGTCGCCGGCTACGACGAGCGCGACGCCGACGACGACGCGCCGCACCGGGCCGACGGCTCGCCCGGCCA GCCGGGACGCTGGCTCAAGCGCGAGGTGGAGCTCACGCACGGGCCGAAGCAGCTCGGCTACTGCGTCGACGGCAT GGACGTGCGGATCCGCGTGGAACCGAGCTGA |