Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|5749
Gene name
Location	Contig_29:7907..8882
Strand	-
Gene length (bp)	975
Transcript length (bp)	729
Coding sequence length (bp)	729
Protein length (aa)	243

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05241	EBP	EXPERA (EXPanded EBP superfamily)	9.2E-20	114	224

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9D0P0\|EBPL_MOUSE	Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1	38	231	6.0E-31
sp\|Q9BY08\|EBPL_HUMAN	Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1	38	241	3.0E-28
sp\|Q60490\|EBP_CAVPO	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3	104	218	2.0E-12
sp\|Q15125\|EBP_HUMAN	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3	111	232	1.0E-11
sp\|P70245\|EBP_MOUSE	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3	112	239	6.0E-11

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9D0P0\|EBPL_MOUSE	Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1	38	231	6.0E-31
sp\|Q9BY08\|EBPL_HUMAN	Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1	38	241	3.0E-28
sp\|Q60490\|EBP_CAVPO	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3	104	218	2.0E-12
sp\|Q15125\|EBP_HUMAN	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3	111	232	1.0E-11
sp\|P70245\|EBP_MOUSE	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3	112	239	6.0E-11
sp\|Q9FTZ2\|EBP_ORYSJ	Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1	34	241	2.0E-10
sp\|O48962\|EBP_ARATH	Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana GN=At1g20050 PE=2 SV=1	104	218	1.0E-09
sp\|Q9JJ46\|EBP_RAT	3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3	116	239	5.0E-09

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 33	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	15	34	19
2	46	68	22
3	136	158	22
4	165	184	19
5	204	226	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|5749 MASESSLPPDLFDRTTIASLLSTVAIVGAAHATSRRVLAPGTSRTLRFLFIWHLADALCHFILEGSFLYHCFFSY LVPGQGAAANLVDLFPTPYNFLGHEDRRIYGPQAGGDNPFAQLWMVYARADKRWAGADLDVISLELLTVLFCGPL ACYICYLIAQKNPKASIWMIVLATSELYGGFMTFCPEWLTGNINLDSSNFMYLWVYLVFFNMLWVFIPLYAIWYS FNDISHAFAVRQSKKKV*
Coding	>Hirsu2\|5749 ATGGCGTCGGAATCGTCGCTCCCGCCCGACCTGTTCGACCGGACGACCATCGCGTCGCTGCTGTCGACGGTGGCG ATTGTCGGCGCCGCCCACGCGACGTCGCGGCGCGTGCTGGCGCCCGGGACGTCGCGGACCCTGCGCTTCCTCTTC ATCTGGCACCTGGCCGACGCGTTGTGCCACTTCATCCTCGAGGGCAGCTTCCTCTACCACTGCTTCTTTTCGTAC CTGGTGCCCGGCCAGGGCGCCGCCGCCAACCTGGTCGACCTGTTCCCGACGCCCTACAACTTCCTGGGCCACGAG GACCGGCGGATCTATGGCCCGCAGGCCGGCGGCGACAATCCCTTTGCCCAGCTGTGGATGGTGTATGCGCGTGCC GACAAGCGATGGGCCGGGGCGGATCTGGATGTCATCAGCTTGGAGCTCCTCACCGTCCTATTCTGCGGCCCGCTG GCCTGCTACATCTGCTACCTGATTGCTCAGAAGAATCCCAAGGCCAGCATCTGGATGATCGTGTTGGCCACAAGC GAGCTGTACGGCGGGTTCATGACGTTTTGCCCCGAGTGGCTCACCGGCAACATCAACCTTGACAGCAGCAACTTC ATGTACCTTTGGGTGTACCTCGTCTTCTTCAACATGCTTTGGGTGTTCATCCCGCTCTATGCCATATGGTACTCG TTCAATGATATATCTCATGCCTTTGCCGTGCGGCAGTCGAAGAAAAAGGTGTAA
Transcript	>Hirsu2\|5749 ATGGCGTCGGAATCGTCGCTCCCGCCCGACCTGTTCGACCGGACGACCATCGCGTCGCTGCTGTCGACGGTGGCG ATTGTCGGCGCCGCCCACGCGACGTCGCGGCGCGTGCTGGCGCCCGGGACGTCGCGGACCCTGCGCTTCCTCTTC ATCTGGCACCTGGCCGACGCGTTGTGCCACTTCATCCTCGAGGGCAGCTTCCTCTACCACTGCTTCTTTTCGTAC CTGGTGCCCGGCCAGGGCGCCGCCGCCAACCTGGTCGACCTGTTCCCGACGCCCTACAACTTCCTGGGCCACGAG GACCGGCGGATCTATGGCCCGCAGGCCGGCGGCGACAATCCCTTTGCCCAGCTGTGGATGGTGTATGCGCGTGCC GACAAGCGATGGGCCGGGGCGGATCTGGATGTCATCAGCTTGGAGCTCCTCACCGTCCTATTCTGCGGCCCGCTG GCCTGCTACATCTGCTACCTGATTGCTCAGAAGAATCCCAAGGCCAGCATCTGGATGATCGTGTTGGCCACAAGC GAGCTGTACGGCGGGTTCATGACGTTTTGCCCCGAGTGGCTCACCGGCAACATCAACCTTGACAGCAGCAACTTC ATGTACCTTTGGGTGTACCTCGTCTTCTTCAACATGCTTTGGGTGTTCATCCCGCTCTATGCCATATGGTACTCG TTCAATGATATATCTCATGCCTTTGCCGTGCGGCAGTCGAAGAAAAAGGTGTAA
Gene	>Hirsu2\|5749 ATGGCGTCGGAATCGTCGCTCCCGCCCGACCTGTTCGACCGGACGACCATCGCGTCGCTGCTGTCGACGGTGGCG ATTGTCGGCGCCGCCCACGCGACGTCGCGGCGCGTGCTGGCGCCCGGGACGTCGCGGACCCTGCGCTTCCTCTTC ATCTGGCACCTGGCCGACGCGTTGTGCCACTTCATCCTCGAGGGCAGCTTCCTCTACCACTGCTTCTTTTCGTAC CTGGTGCCCGGCCAGGGCGCCGCCGCCAACCTGGTCGACCTGTTCCCGACGCCCTACAACTTCCTGGGCCACGAG GACCGGCGGATCTATGGCCCGCAGGCCGGCGGCGACAATCCCTTTGCCCAGCTGTGGATGGTGTATGCGCGTGCC GACAAGCGATGGGCCGGGGCGGATCTGGTACGAATAATCTCCTTCATCCGTGCTCCTCCCCCCTTCCAATCCGTA CCTGTGTCAGAACCAGGAGAGATCGAATGAGGAGAGGGGGGGGCGGTGAAAACTGTGGTGGCTGACGCGTGGGCT GCCTGGTCAGGATGTCATCAGCTTGGAGCTCCTCACCGTCCTATTCTGCGGCCCGCTGGCCTGCTACATCTGCTA CCTGATTGCTCAGAAGAATCCCAAGGCCAGCATCTGGATGATCGTGTTGGCCACAAGCGAGCTGTACGGCGGTAC GTGGTCGCCCCCTCTCGTTATCCAGATCCTCCCAACCCATCCGTCCTCGACGGATAAGCCACCCAGAGCGTAACG CTCGACCATGAAATGACGAACCGCGCGCGTGTAGGGTTCATGACGTTTTGCCCCGAGTGGCTCACCGGCAACATC AACCTTGACAGCAGCAACTTCATGTACCTTTGGGTGTACCTCGTCTTCTTCAACATGCTTTGGGTGTTCATCCCG CTCTATGCCATATGGTACTCGTTCAATGATATATCTCATGCCTTTGCCGTGCGGCAGTCGAAGAAAAAGGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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