© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|57 |
| Gene name | |
| Location | Contig_1005:2494..3984 |
| Strand | + |
| Gene length (bp) | 1490 |
| Transcript length (bp) | 690 |
| Coding sequence length (bp) | 690 |
| Protein length (aa) | 230 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus|Extracellular | Signal peptide | 0.6476 | 0.5366 | 0.76 | 0.1012 | 0.1494 | 0.1113 | 0.0863 | 0.0746 | 0.1735 | 0.0228 |
| Orthofinder run ID | 4 |
| Orthogroup | 9939 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|57 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|57 MGRPWNTHDESATPDHRTETYETEQQPSGSRRRPIRGSGRGRRPRGAPERRPRLRSPAGIAGDEPPKACGQEIRC TGRVWLTERREPLDYAYGPRNGKGSLERKPNSSSGLCGRTMPLAMPSALSSPVRKVSSLAEDGPCPLDRALDEES APDIPIGDSKRAAVCFLTVTRGHESAGAKRGLASCPARSKRVGCQASPGRTFFGASRSAPPDGKAAVEPAAASRA VALP* |
| Coding | >Hirsu2|57 ATGGGACGACCATGGAACACGCACGACGAGTCAGCAACACCAGACCACAGGACGGAGACATATGAGACGGAACAG CAGCCGTCCGGCAGCAGACGACGGCCGATTCGGGGGAGCGGTCGTGGTCGGCGCCCTCGCGGTGCGCCGGAGCGC CGTCCTCGCCTCCGCTCCCCGGCCGGCATCGCCGGTGACGAGCCGCCCAAGGCCTGTGGCCAGGAAATCCGATGT ACAGGGCGGGTCTGGCTTACGGAACGCCGTGAGCCCCTTGATTACGCGTACGGGCCGCGGAACGGCAAAGGAAGC CTTGAACGCAAGCCCAACAGCAGTTCAGGCCTCTGCGGACGCACCATGCCGTTGGCCATGCCATCCGCCCTGTCC TCGCCAGTACGCAAAGTCTCCTCGCTGGCCGAGGACGGTCCCTGTCCTCTGGATAGGGCACTTGACGAGGAATCA GCCCCGGACATCCCCATCGGCGACAGCAAGAGAGCGGCAGTCTGCTTCCTTACCGTAACACGAGGGCACGAGTCA GCGGGGGCCAAGAGAGGGTTGGCTTCATGCCCAGCACGTTCGAAACGAGTCGGGTGTCAAGCCTCCCCTGGCAGA ACGTTTTTCGGCGCTTCGAGATCTGCTCCACCGGACGGTAAGGCTGCTGTGGAGCCGGCCGCCGCGTCCCGGGCT GTAGCCCTACCGTAG |
| Transcript | >Hirsu2|57 ATGGGACGACCATGGAACACGCACGACGAGTCAGCAACACCAGACCACAGGACGGAGACATATGAGACGGAACAG CAGCCGTCCGGCAGCAGACGACGGCCGATTCGGGGGAGCGGTCGTGGTCGGCGCCCTCGCGGTGCGCCGGAGCGC CGTCCTCGCCTCCGCTCCCCGGCCGGCATCGCCGGTGACGAGCCGCCCAAGGCCTGTGGCCAGGAAATCCGATGT ACAGGGCGGGTCTGGCTTACGGAACGCCGTGAGCCCCTTGATTACGCGTACGGGCCGCGGAACGGCAAAGGAAGC CTTGAACGCAAGCCCAACAGCAGTTCAGGCCTCTGCGGACGCACCATGCCGTTGGCCATGCCATCCGCCCTGTCC TCGCCAGTACGCAAAGTCTCCTCGCTGGCCGAGGACGGTCCCTGTCCTCTGGATAGGGCACTTGACGAGGAATCA GCCCCGGACATCCCCATCGGCGACAGCAAGAGAGCGGCAGTCTGCTTCCTTACCGTAACACGAGGGCACGAGTCA GCGGGGGCCAAGAGAGGGTTGGCTTCATGCCCAGCACGTTCGAAACGAGTCGGGTGTCAAGCCTCCCCTGGCAGA ACGTTTTTCGGCGCTTCGAGATCTGCTCCACCGGACGGTAAGGCTGCTGTGGAGCCGGCCGCCGCGTCCCGGGCT GTAGCCCTACCGTAG |
| Gene | >Hirsu2|57 ATGGGACGACCATGGAACACGCACGACGAGTCAGCAACACCAGACCACAGGACGGAGACATATGAGACGGAACAG CGTGGGGGGCCTCAAAGCCCACCGGCACTCGTCGGAGCGGCGGGAGGGGCGCGGAGCGCTTGGGTGCGAACCTGA GCGCATCCAGTGGACGCGGCCCTCGCTCTGCCGCCATGTGCCCAAGGGGGACTGGCCGGGCATGTCACCGTCGAC TGCGGGAGCCGGACCGCCCATGACTCGGGGGCTGGGGGGGGGTCATCGTCGGAACGCCTCCGGCGCCGCTGCTCG CGTTCGCCGTGGGGCCTGAGCGGCGTCCGAGACGGGCGGACAGGACGAAACGCCGTGCTGGGCTGGGAGCGCAAG CCGCGCGTGTGGGGACCGGTCGCGTTCATTAGACGAAGGGCATTGCTCGGCTGTCTGTGCATCCGAGCTGTCAGC CCGAGAGCCCACATAGCGGCGTATAGGCCTCGGCATGTTTGAATTTTGGCTCGGCACGGCACCGGGATTCGAGAC AAGTTCTTGCCTGGAAGCAGACTAGTCGTCTGCGGCACGTCGACTCATGGTTCTCAACGCTCGGCTGGGAGGAGC AACAACGATCCTTCACTGCTCCATCGCATACCCAAAGAGGGGGGCCGCTCGAGAACTGCGACTATCATCTCCTGA GCTAGGGGACATCAGCGGGGGCCGGGGGCCAACCCCAGCCCTAAGGGGAGACGCTCGATACGACACCAATCGTCT CGACCCGCGGTGCGCGGCCATCTCGCTCTGCGCACCGATGCGAGAGAGGGTCCGACGGCTGAGCTCGAGGGGGGG AAAAACATCCAACACGTACTCACCGGCAACAACTCTGCGGCCGGCTGGCAGAGCCGTCCGGCAGCAGACGACGGC CGATTCGGGGGAGCGGTCGTGGTCGGCGCCCTCGCGGTGCGCCGGAGCGCCGTCCTCGCCTCCGCTCCCCGGCCG GCATCGCCGGTGACGAGCCGCCCAAGGCCTGTGGCCAGGAAATCCGATGTACAGGGCGGGTCTGGCTTACGGAAC GCCGTGAGCCCCTTGATTACGCGTACGGGCCGCGGAACGGCAAAGGAAGCCTTGAACGCAAGCCCAACAGCAGTT CAGGCCTCTGCGGACGCACCATGCCGTTGGCCATGCCATCCGCCCTGTCCTCGCCAGTACGCAAAGTCTCCTCGC TGGCCGAGGACGGTCCCTGTCCTCTGGATAGGGCACTTGACGAGGAATCAGCCCCGGACATCCCCATCGGCGACA GCAAGAGAGCGGCAGTCTGCTTCCTTACCGTAACACGAGGGCACGAGTCAGCGGGGGCCAAGAGAGGGTTGGCTT CATGCCCAGCACGTTCGAAACGAGTCGGGTGTCAAGCCTCCCCTGGCAGAACGTTTTTCGGCGCTTCGAGATCTG CTCCACCGGACGGTAAGGCTGCTGTGGAGCCGGCCGCCGCGTCCCGGGCTGTAGCCCTACCGTAG |