Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5683
Gene name
LocationContig_286:244..3172
Strand+
Gene length (bp)2928
Transcript length (bp)2799
Coding sequence length (bp)2799
Protein length (aa) 933

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08659 KR KR domain 1.4E-53 565 741
PF00106 adh_short short chain dehydrogenase 8.3E-09 567 730
PF00550 PP-binding Phosphopantetheine attachment site 2.1E-08 862 923
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 3.1E-07 574 730

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7D5|LOVF_ASPTE Lovastatin diketide synthase LovF OS=Aspergillus terreus GN=lovF PE=1 SV=1 66 926 9.0E-74
sp|P96202|PPSC_MYCTU Phthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ppsC PE=1 SV=2 171 926 2.0E-46
sp|Q7TXL8|PPSC_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsC PE=1 SV=1 171 926 2.0E-46
sp|Q55E72|PKS1_DICDI Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1 271 924 4.0E-39
sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3 245 750 1.0E-35
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7D5|LOVF_ASPTE Lovastatin diketide synthase LovF OS=Aspergillus terreus GN=lovF PE=1 SV=1 66 926 9.0E-74
sp|P96202|PPSC_MYCTU Phthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ppsC PE=1 SV=2 171 926 2.0E-46
sp|Q7TXL8|PPSC_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsC PE=1 SV=1 171 926 2.0E-46
sp|Q55E72|PKS1_DICDI Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1 271 924 4.0E-39
sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3 245 750 1.0E-35
sp|P19096|FAS_MOUSE Fatty acid synthase OS=Mus musculus GN=Fasn PE=1 SV=2 245 750 4.0E-35
sp|B2HIL7|MSL7_MYCMM Phenolphthiocerol synthesis polyketide synthase type I Pks15/1 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=pks15/1 PE=1 SV=1 255 903 3.0E-34
sp|P12276|FAS_CHICK Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5 241 746 6.0E-34
sp|P96285|PKS1_MYCTU Putative inactive phenolphthiocerol synthesis polyketide synthase type I Pks1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=pks1 PE=1 SV=4 255 903 1.0E-33
sp|Q7TXK8|MSL7_MYCBO Phenolphthiocerol synthesis polyketide synthase type I Pks15/1 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=pks15/1 PE=1 SV=1 255 903 3.0E-33
sp|Q4WAZ9|NRP14_ASPFU Nonribosomal peptide synthetase 14 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=NRPS14 PE=2 SV=2 534 925 4.0E-33
sp|Q03132|ERYA2_SACER Erythronolide synthase, modules 3 and 4 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=3 166 740 4.0E-33
sp|Q71SP7|FAS_BOVIN Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1 236 750 7.0E-33
sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3 236 751 8.0E-33
sp|A1CLY8|CCSA_ASPCL Polyketide synthase-nonribosomal peptide synthetase OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ccsA PE=3 SV=1 548 927 7.0E-31
sp|Q86JI5|PKS5_DICDI Probable polyketide synthase 5 OS=Dictyostelium discoideum GN=pks5 PE=2 SV=1 270 928 1.0E-30
sp|B0G100|PKS7_DICDI Probable polyketide synthase 7 OS=Dictyostelium discoideum GN=pks7 PE=3 SV=1 270 928 8.0E-30
sp|A1KQG0|PHAS_MYCBP Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pks2 PE=3 SV=1 238 926 2.0E-29
sp|P9WQE9|PHAS_MYCTU Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=pks2 PE=1 SV=1 238 926 2.0E-29
sp|P9WQE8|PHAS_MYCTO Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=pks2 PE=3 SV=1 238 926 2.0E-29
sp|A5U9F4|PHAS_MYCTA Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pks2 PE=3 SV=1 238 926 2.0E-29
sp|Q7TVK8|PHAS_MYCBO Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=pks2 PE=3 SV=1 238 926 2.0E-29
sp|B0G101|PKS8_DICDI Probable polyketide synthase 8/35 OS=Dictyostelium discoideum GN=pks8 PE=3 SV=1 270 928 5.0E-29
sp|Q0C8M3|LNKS_ASPTN Lovastatin nonaketide synthase OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=lovB PE=3 SV=2 541 923 4.0E-28
sp|Q9Y8A5|LNKS_ASPTE Lovastatin nonaketide synthase OS=Aspergillus terreus GN=lovB PE=1 SV=1 541 923 1.0E-27
sp|Q02251|MCAS_MYCBO Mycocerosic acid synthase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=mas PE=1 SV=2 270 758 6.0E-27
sp|Q869X2|PKS17_DICDI Probable polyketide synthase 17 OS=Dictyostelium discoideum GN=pks17 PE=3 SV=1 270 909 9.0E-26
sp|Q86AE3|PKS9_DICDI Probable polyketide synthase 9/36 OS=Dictyostelium discoideum GN=pks9 PE=2 SV=1 271 928 9.0E-26
sp|B0G0Z9|PKS6_DICDI Probable polyketide synthase 6 OS=Dictyostelium discoideum GN=pks6 PE=3 SV=1 271 928 1.0E-25
sp|Q54KU5|PKS24_DICDI Probable polyketide synthase 24 OS=Dictyostelium discoideum GN=pks24 PE=3 SV=1 239 901 6.0E-25
sp|Q869W9|PKS16_DICDI Probable polyketide synthase 16 OS=Dictyostelium discoideum GN=pks16 PE=2 SV=1 270 909 2.0E-24
sp|P22367|MSAS_PENPA 6-methylsalicylic acid synthase OS=Penicillium patulum PE=1 SV=1 562 895 2.0E-22
sp|Q54FQ1|PKS31_DICDI Probable polyketide synthase 31 OS=Dictyostelium discoideum GN=pks31 PE=3 SV=1 237 908 2.0E-22
sp|B4XYB8|AZIB_STREG 5-methyl-1-naphthoate synthase OS=Streptomyces sahachiroi GN=aziB PE=1 SV=1 539 895 8.0E-22
sp|Q54IX3|PKS26_DICDI Probable polyketide synthase 26 OS=Dictyostelium discoideum GN=pks26 PE=3 SV=1 208 902 1.0E-21
sp|Q54ED6|PKS41_DICDI Probable polyketide synthase 41 OS=Dictyostelium discoideum GN=pks41 PE=3 SV=1 216 902 4.0E-21
sp|Q03133|ERYA3_SACER Erythronolide synthase, modules 5 and 6 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=4 531 926 5.0E-21
sp|Q54ED7|PKS40_DICDI Probable polyketide synthase 40 OS=Dictyostelium discoideum GN=pks40 PE=3 SV=1 216 902 5.0E-21
sp|Q559A9|PKS13_DICDI Probable polyketide synthase 13 OS=Dictyostelium discoideum GN=pks13 PE=3 SV=1 114 903 1.0E-20
sp|Q03131|ERYA1_SACER Erythronolide synthase, modules 1 and 2 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=1 549 771 4.0E-20
sp|Q54FI3|PKS37_DICDI Probable polyketide synthase 37 OS=Dictyostelium discoideum GN=stlB PE=2 SV=1 240 751 9.0E-20
sp|Q07017|OL56_STRAT Oleandomycin polyketide synthase, modules 5 and 6 OS=Streptomyces antibioticus GN=orfB PE=3 SV=1 580 909 2.0E-19
sp|Q54KU3|PKS25_DICDI Probable polyketide synthase 25 OS=Dictyostelium discoideum GN=pks25 PE=3 SV=1 239 752 6.0E-19
sp|Q07017|OL56_STRAT Oleandomycin polyketide synthase, modules 5 and 6 OS=Streptomyces antibioticus GN=orfB PE=3 SV=1 580 740 1.0E-18
sp|Q558Y6|PKS14_DICDI Probable polyketide synthase 14 OS=Dictyostelium discoideum GN=pks14 PE=3 SV=2 271 908 3.0E-18
sp|Q55DM7|PKS2_DICDI Probable polyketide synthase 2 OS=Dictyostelium discoideum GN=pks2 PE=3 SV=1 263 926 3.0E-18
sp|Q54D44|PKS42_DICDI Probable polyketide synthase 42 OS=Dictyostelium discoideum GN=pks42 PE=3 SV=2 269 902 4.0E-18
sp|Q54G30|PKS27_DICDI Probable polyketide synthase 27 OS=Dictyostelium discoideum GN=pks27 PE=3 SV=1 270 908 8.0E-18
sp|P9WQE6|PPSA_MYCTO Phthiocerol synthesis polyketide synthase type I PpsA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ppsA PE=3 SV=1 535 749 2.0E-17
sp|Q7TXM0|PPSA_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsA PE=1 SV=1 535 749 2.0E-17
sp|P9WQE7|PPSA_MYCTU Phthiocerol synthesis polyketide synthase type I PpsA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ppsA PE=1 SV=1 535 749 2.0E-17
sp|O31782|PKSN_BACSU Polyketide synthase PksN OS=Bacillus subtilis (strain 168) GN=pksN PE=1 SV=3 566 747 6.0E-17
sp|P40806|PKSJ_BACSU Polyketide synthase PksJ OS=Bacillus subtilis (strain 168) GN=pksJ PE=1 SV=3 566 762 2.0E-16
sp|Q54FN2|PKS34_DICDI Probable polyketide synthase 34 OS=Dictyostelium discoideum GN=pks34 PE=3 SV=1 265 751 5.0E-15
sp|Q03133|ERYA3_SACER Erythronolide synthase, modules 5 and 6 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=4 554 924 9.0E-15
sp|Q54FD2|PKS38_DICDI Probable polyketide synthase 38 OS=Dictyostelium discoideum GN=pks38 PE=3 SV=1 270 908 2.0E-14
sp|Q03131|ERYA1_SACER Erythronolide synthase, modules 1 and 2 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=1 578 740 4.0E-14
sp|Q54QD1|PKS23_DICDI Probable polyketide synthase 23 OS=Dictyostelium discoideum GN=pks23 PE=3 SV=1 238 919 4.0E-14
sp|P40872|PKSM_BACSU Polyketide synthase PksM OS=Bacillus subtilis (strain 168) GN=pksM PE=1 SV=4 566 728 8.0E-14
sp|Q54FN7|PKS33_DICDI Probable polyketide synthase 33 OS=Dictyostelium discoideum GN=pks33 PE=3 SV=2 265 908 3.0E-13
sp|Q54FQ3|PKS29_DICDI Probable polyketide synthase 29 OS=Dictyostelium discoideum GN=pks29 PE=3 SV=1 270 908 4.0E-13
sp|Q54FP8|PKS32_DICDI Probable polyketide synthase 32 OS=Dictyostelium discoideum GN=pks32 PE=3 SV=1 265 751 4.0E-13
sp|Q54QD3|PKS22_DICDI Probable polyketide synthase 22 OS=Dictyostelium discoideum GN=pks22 PE=3 SV=1 238 919 5.0E-13
sp|O31782|PKSN_BACSU Polyketide synthase PksN OS=Bacillus subtilis (strain 168) GN=pksN PE=1 SV=3 566 747 5.0E-12
sp|Q05470|PKSL_BACSU Polyketide synthase PksL OS=Bacillus subtilis (strain 168) GN=pksL PE=1 SV=3 566 747 1.0E-11
sp|Q54FQ2|PKS30_DICDI Probable polyketide synthase 30 OS=Dictyostelium discoideum GN=pks30 PE=3 SV=1 265 751 1.0E-11
sp|Q80TB8|VAT1L_MOUSE Synaptic vesicle membrane protein VAT-1 homolog-like OS=Mus musculus GN=Vat1l PE=1 SV=2 271 511 8.0E-11
sp|Q9HCJ6|VAT1L_HUMAN Synaptic vesicle membrane protein VAT-1 homolog-like OS=Homo sapiens GN=VAT1L PE=1 SV=2 271 511 8.0E-11
sp|P40872|PKSM_BACSU Polyketide synthase PksM OS=Bacillus subtilis (strain 168) GN=pksM PE=1 SV=4 559 725 1.0E-10
sp|P9WQE5|PPSB_MYCTU Phthiocerol synthesis polyketide synthase type I PpsB OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ppsB PE=1 SV=1 560 779 5.0E-10
sp|P9WQE4|PPSB_MYCTO Phthiocerol synthesis polyketide synthase type I PpsB OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ppsB PE=3 SV=1 560 779 5.0E-10
sp|Q05470|PKSL_BACSU Polyketide synthase PksL OS=Bacillus subtilis (strain 168) GN=pksL PE=1 SV=3 563 724 1.0E-09
sp|Q7TXL9|PPSB_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsB OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsB PE=1 SV=1 560 779 1.0E-09
sp|O35017|YOGA_BACSU Uncharacterized zinc-type alcohol dehydrogenase-like protein YogA OS=Bacillus subtilis (strain 168) GN=yogA PE=3 SV=1 225 464 1.0E-09
sp|Q8JFV8|VAT1_DANRE Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio GN=vat1 PE=2 SV=1 243 511 3.0E-09
sp|Q99536|VAT1_HUMAN Synaptic vesicle membrane protein VAT-1 homolog OS=Homo sapiens GN=VAT1 PE=1 SV=2 271 469 3.0E-09
sp|P9WQE3|PPSD_MYCTU Phthiocerol synthesis polyketide synthase type I PpsD OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ppsD PE=1 SV=1 580 930 9.0E-09
sp|P9WQE2|PPSD_MYCTO Phthiocerol synthesis polyketide synthase type I PpsD OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ppsD PE=3 SV=1 580 930 9.0E-09
sp|P19333|VAT1_TORCA Synaptic vesicle membrane protein VAT-1 OS=Torpedo californica PE=1 SV=1 239 458 1.0E-08
sp|Q7TXL7|PPSD_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsD OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsD PE=3 SV=1 580 930 1.0E-08
sp|P40806|PKSJ_BACSU Polyketide synthase PksJ OS=Bacillus subtilis (strain 168) GN=pksJ PE=1 SV=3 563 724 1.0E-08
sp|O97764|QOR_BOVIN Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2 242 451 2.0E-08
sp|P43903|QOR_PSEAE Quinone oxidoreductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=qor PE=3 SV=2 232 396 4.0E-08
sp|O31782|PKSN_BACSU Polyketide synthase PksN OS=Bacillus subtilis (strain 168) GN=pksN PE=1 SV=3 622 728 5.0E-08
sp|P40783|QOR_SALTY Quinone oxidoreductase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=qor PE=3 SV=2 221 435 5.0E-08
sp|Q54TW0|PKS18_DICDI Probable polyketide synthase 18 OS=Dictyostelium discoideum GN=pks18 PE=2 SV=1 271 752 6.0E-08
sp|A6QQF5|QORL2_BOVIN Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2 229 526 1.0E-07
sp|Q0MVN8|QOR_PIG Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1 242 451 8.0E-07
sp|P11415|QOR_CAVPO Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1 242 451 1.0E-06
sp|Q3MIE4|VAT1_RAT Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus GN=Vat1 PE=1 SV=1 291 511 2.0E-06
sp|P28304|QOR1_ECOLI Quinone oxidoreductase 1 OS=Escherichia coli (strain K12) GN=qorA PE=1 SV=1 221 442 3.0E-06
sp|Q59A28|QORL1_BOVIN Quinone oxidoreductase-like protein 1 OS=Bos taurus GN=CRYZL1 PE=2 SV=1 270 430 3.0E-06
sp|Q921W4|QORL1_MOUSE Quinone oxidoreductase-like protein 1 OS=Mus musculus GN=Cryzl1 PE=1 SV=1 270 511 4.0E-06
sp|P42865|QOR_LEIAM Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1 271 524 7.0E-06
sp|Q62465|VAT1_MOUSE Synaptic vesicle membrane protein VAT-1 homolog OS=Mus musculus GN=Vat1 PE=1 SV=3 291 469 8.0E-06
[Show less]

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.7797 0.3634 0.3363 0.1431 0.1103 0.0071 0.0328 0.0874 0.067 0.01

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|201
Ophiocordyceps australis 1348a (Ghana) OphauG2|7422
Ophiocordyceps australis 1348a (Ghana) OphauG2|7411
Ophiocordyceps australis 1348a (Ghana) OphauG2|6241
Ophiocordyceps australis 1348a (Ghana) OphauG2|4898
Ophiocordyceps australis 1348a (Ghana) OphauG2|4897
Ophiocordyceps australis 1348a (Ghana) OphauG2|2708
Ophiocordyceps australis 1348a (Ghana) OphauG2|2128
Ophiocordyceps australis 1348a (Ghana) OphauG2|1191
Ophiocordyceps australis 1348a (Ghana) OphauG2|1124
Ophiocordyceps australis 1348a (Ghana) OphauG2|7710
Ophiocordyceps australis map64 (Brazil) OphauB2|4459
Ophiocordyceps australis map64 (Brazil) OphauB2|5387
Ophiocordyceps australis map64 (Brazil) OphauB2|476
Ophiocordyceps australis map64 (Brazil) OphauB2|5635
Ophiocordyceps australis map64 (Brazil) OphauB2|3063
Ophiocordyceps australis map64 (Brazil) OphauB2|5406
Ophiocordyceps australis map64 (Brazil) OphauB2|3017
Ophiocordyceps australis map64 (Brazil) OphauB2|712
Ophiocordyceps australis map64 (Brazil) OphauB2|1455
Ophiocordyceps australis map64 (Brazil) OphauB2|1454
Ophiocordyceps australis map64 (Brazil) OphauB2|6068
Ophiocordyceps australis map64 (Brazil) OphauB2|6715
Ophiocordyceps australis map64 (Brazil) OphauB2|5636
Ophiocordyceps australis map64 (Brazil) OphauB2|7340
Ophiocordyceps australis map64 (Brazil) OphauB2|7710
Ophiocordyceps australis map64 (Brazil) OphauB2|2028
Ophiocordyceps australis map64 (Brazil) OphauB2|5805
Ophiocordyceps camponoti-floridani Ophcf2|02942
Ophiocordyceps subramaniannii Hirsu2|8482
Ophiocordyceps subramaniannii Hirsu2|8480
Ophiocordyceps subramaniannii Hirsu2|7800
Ophiocordyceps subramaniannii Hirsu2|7724
Ophiocordyceps subramaniannii Hirsu2|6729
Ophiocordyceps subramaniannii Hirsu2|5683 (this protein)
Ophiocordyceps subramaniannii Hirsu2|5301
Ophiocordyceps subramaniannii Hirsu2|5151
Ophiocordyceps subramaniannii Hirsu2|4977
Ophiocordyceps subramaniannii Hirsu2|4297
Ophiocordyceps subramaniannii Hirsu2|4296
Ophiocordyceps subramaniannii Hirsu2|3325
Ophiocordyceps subramaniannii Hirsu2|26
Ophiocordyceps subramaniannii Hirsu2|25
Ophiocordyceps subramaniannii Hirsu2|9187
Ophiocordyceps subramaniannii Hirsu2|11188

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5683
MSAIVARSPEEPVAPRQPKCTIIYNPGSALQRQLAEKCASALAEDHEAFILRLEDVGSDGAFNSGVCVVLVNFQD
LHLCDMTQGEFEKIKLLLTTCLNLIWVCEDPKDEPKAAMCQGLLRTARWERDHDEVNFLTLGIGHPLPRIEVAAS
EIVRLVRAAFECRGVVPRNAEYVLRNGTLFTNRLFSARGVNRAISRLDEPITEAVPVKDVIEPMRLTSVDPQRSL
ALQFVPDELASEPLGPREVLIQVHAAGLGRDVVEDVARLIPGQGIGRDCVGIVTGIGSSVEHVAVGHRVMALRTI
PSTGSLQSELRTRCEAVCRVPEGVGSLEAATVPYNFVAAHYCLKTIAQLQPGEIIMIKSACQAIGQAAIQLAASQ
DARLLLTTSSEEERRYLASQYCQDPSSIFLNDHGPSITPQIQTATCGQGVDVYLNCDSVGLSDIDKSHVSAFGRI
VDLYGGATASRLSFNALGRGNISYTGVDMDIVVQSRVGLVEEALEHVTAKLAAGRVKPLSDVKEIGISEVSKAIF
QFRLESSRHPSMFVVRPRDDEVIPISIRPIGEYRLDPDSSYLLVGGFGGIGRRLALWMQSRGAQNLIFISRSGLS
AAPARDLYGTLRNSRGCKVESVACDIADADAVKEALAKVCKTMPPIRGCIQCSMVLQDSMLLNMSHGQFMAAVTP
KVAGSINIANNLPAAGLDFFVMLSATAAIFGNRGQANYTAANAFLDAYARQLAARGRPATSVGLGRVLSVGWVAE
NQERLPMPLACGDIAEDRLLSILEYHMDPRWGAAKAVDSCHTISGLRSATDFERASLPLPPFMAYPLFTHLCASK
PETTAETTEATVPIAKLLKTATSKEESLALVTEATIAKVSRVMAVSPKDLESHRTLSSYGVDSLVAVDLKAWFKK
ELGAVVATRDVLGKLSIQDLAEKIVEISGLLN*
Coding >Hirsu2|5683
ATGTCGGCCATCGTGGCGCGCTCGCCCGAAGAGCCCGTTGCGCCTCGGCAGCCCAAGTGCACGATCATCTACAAC
CCCGGAAGCGCCCTGCAAAGACAGCTGGCAGAGAAGTGCGCCTCTGCGCTGGCGGAGGATCACGAGGCATTCATA
CTGCGGCTCGAAGACGTGGGCTCTGACGGCGCTTTCAACAGCGGCGTGTGCGTCGTCCTCGTCAACTTTCAGGAC
TTGCATCTATGTGACATGACGCAGGGCGAGTTCGAAAAGATCAAGCTGCTGCTCACTACGTGCCTCAATCTCATC
TGGGTCTGCGAGGATCCCAAAGATGAGCCCAAGGCGGCCATGTGTCAGGGCCTGTTGCGGACGGCGAGGTGGGAG
CGAGACCACGACGAAGTCAACTTCCTCACGCTCGGCATCGGCCACCCGCTGCCCAGAATCGAGGTTGCTGCCTCC
GAGATCGTCCGGCTCGTTCGAGCGGCCTTTGAGTGTCGGGGCGTTGTGCCGCGAAACGCCGAATACGTCCTCAGA
AACGGCACGCTCTTCACGAACAGACTGTTCTCGGCTAGAGGCGTAAACCGGGCGATATCCAGACTTGACGAGCCC
ATCACCGAGGCCGTTCCGGTCAAGGATGTAATCGAGCCTATGAGGCTCACGTCAGTCGACCCGCAGAGGTCGCTG
GCCCTGCAGTTCGTCCCCGACGAGCTGGCCAGTGAGCCCCTGGGCCCTCGCGAGGTCCTCATCCAGGTCCATGCT
GCTGGCCTGGGGCGCGATGTGGTTGAAGACGTTGCTCGCTTGATTCCGGGACAAGGCATAGGCCGAGACTGTGTC
GGAATCGTGACGGGCATTGGCTCGTCCGTCGAGCACGTTGCCGTCGGCCATCGCGTCATGGCACTTCGGACGATC
CCTTCGACCGGCTCTCTTCAGAGCGAGCTTCGCACTCGTTGCGAGGCAGTTTGCAGAGTGCCCGAAGGCGTCGGG
TCTCTCGAGGCTGCCACGGTCCCCTACAACTTCGTCGCGGCTCACTACTGCCTAAAGACTATAGCCCAGTTGCAG
CCGGGCGAGATAATTATGATTAAGAGTGCTTGCCAGGCGATTGGTCAGGCGGCCATTCAGCTAGCTGCCTCCCAA
GATGCCCGGCTGCTGCTCACCACCTCGTCCGAAGAGGAGAGGCGATATCTAGCTTCCCAGTACTGTCAAGATCCG
TCTTCGATCTTCCTGAACGATCATGGTCCATCCATCACTCCGCAAATCCAGACAGCGACCTGCGGCCAAGGCGTT
GACGTTTACCTCAACTGCGACTCCGTGGGTCTGTCCGATATCGACAAGTCGCACGTGTCCGCCTTCGGCCGCATC
GTCGATCTCTATGGCGGCGCCACAGCAAGCAGGCTCTCATTCAATGCCCTAGGTCGCGGAAACATCTCATACACG
GGCGTCGACATGGACATCGTGGTCCAGTCCCGGGTCGGCCTCGTGGAAGAGGCTCTCGAGCATGTAACAGCGAAA
CTGGCTGCTGGGCGGGTGAAGCCCCTGAGCGACGTCAAGGAGATCGGTATTTCAGAAGTCTCCAAGGCCATTTTC
CAGTTCCGGCTTGAAAGCTCAAGACACCCATCCATGTTTGTCGTGCGTCCTCGAGACGATGAGGTCATTCCCATT
TCCATCCGGCCCATCGGCGAGTACAGGCTCGATCCCGACTCGTCCTATCTTCTGGTTGGCGGTTTCGGAGGTATT
GGACGAAGACTTGCCCTCTGGATGCAGTCTCGCGGCGCGCAGAACCTGATATTCATATCGCGATCGGGGCTTAGC
GCTGCTCCGGCCCGGGACCTCTACGGAACGCTCAGGAATTCGCGTGGATGCAAGGTGGAGAGCGTGGCATGCGAC
ATTGCTGACGCTGACGCCGTCAAGGAAGCCTTGGCCAAGGTCTGTAAGACGATGCCGCCCATTAGGGGCTGTATC
CAGTGCTCCATGGTCTTACAGGACTCTATGCTGTTGAATATGTCGCACGGCCAGTTCATGGCTGCCGTTACGCCA
AAAGTAGCCGGCTCCATCAACATCGCCAACAACCTCCCTGCCGCCGGCCTGGACTTCTTCGTCATGCTCTCGGCC
ACAGCCGCCATTTTTGGCAACCGAGGCCAGGCCAACTACACGGCCGCCAATGCCTTTCTGGACGCGTACGCAAGA
CAGCTCGCCGCCAGAGGCCGCCCCGCGACCTCCGTCGGCCTCGGCCGCGTGCTCTCCGTCGGCTGGGTGGCCGAG
AACCAGGAGCGGCTGCCCATGCCCCTGGCGTGCGGCGACATAGCAGAGGATCGCCTCCTGTCCATACTGGAGTAC
CACATGGATCCGAGATGGGGCGCGGCAAAGGCCGTCGACAGTTGCCACACGATTTCCGGCCTGAGGTCCGCCACC
GACTTCGAGCGGGCATCTCTCCCGCTGCCGCCGTTCATGGCCTATCCCCTGTTTACGCATCTCTGCGCCTCGAAG
CCGGAGACAACGGCAGAAACAACGGAGGCGACGGTACCCATTGCGAAATTGCTCAAGACGGCCACGTCCAAGGAG
GAATCCCTCGCGCTGGTTACAGAGGCCACCATTGCCAAGGTCTCCAGAGTCATGGCCGTCTCTCCGAAAGATTTG
GAGTCGCACCGAACACTTTCCTCCTACGGCGTCGACTCTCTCGTCGCAGTGGACTTGAAGGCGTGGTTCAAGAAG
GAGCTTGGTGCCGTGGTCGCGACGCGGGACGTTTTGGGTAAACTTTCGATTCAGGATCTAGCAGAGAAGATTGTT
GAGATCAGTGGTCTGCTGAATTGA
Transcript >Hirsu2|5683
ATGTCGGCCATCGTGGCGCGCTCGCCCGAAGAGCCCGTTGCGCCTCGGCAGCCCAAGTGCACGATCATCTACAAC
CCCGGAAGCGCCCTGCAAAGACAGCTGGCAGAGAAGTGCGCCTCTGCGCTGGCGGAGGATCACGAGGCATTCATA
CTGCGGCTCGAAGACGTGGGCTCTGACGGCGCTTTCAACAGCGGCGTGTGCGTCGTCCTCGTCAACTTTCAGGAC
TTGCATCTATGTGACATGACGCAGGGCGAGTTCGAAAAGATCAAGCTGCTGCTCACTACGTGCCTCAATCTCATC
TGGGTCTGCGAGGATCCCAAAGATGAGCCCAAGGCGGCCATGTGTCAGGGCCTGTTGCGGACGGCGAGGTGGGAG
CGAGACCACGACGAAGTCAACTTCCTCACGCTCGGCATCGGCCACCCGCTGCCCAGAATCGAGGTTGCTGCCTCC
GAGATCGTCCGGCTCGTTCGAGCGGCCTTTGAGTGTCGGGGCGTTGTGCCGCGAAACGCCGAATACGTCCTCAGA
AACGGCACGCTCTTCACGAACAGACTGTTCTCGGCTAGAGGCGTAAACCGGGCGATATCCAGACTTGACGAGCCC
ATCACCGAGGCCGTTCCGGTCAAGGATGTAATCGAGCCTATGAGGCTCACGTCAGTCGACCCGCAGAGGTCGCTG
GCCCTGCAGTTCGTCCCCGACGAGCTGGCCAGTGAGCCCCTGGGCCCTCGCGAGGTCCTCATCCAGGTCCATGCT
GCTGGCCTGGGGCGCGATGTGGTTGAAGACGTTGCTCGCTTGATTCCGGGACAAGGCATAGGCCGAGACTGTGTC
GGAATCGTGACGGGCATTGGCTCGTCCGTCGAGCACGTTGCCGTCGGCCATCGCGTCATGGCACTTCGGACGATC
CCTTCGACCGGCTCTCTTCAGAGCGAGCTTCGCACTCGTTGCGAGGCAGTTTGCAGAGTGCCCGAAGGCGTCGGG
TCTCTCGAGGCTGCCACGGTCCCCTACAACTTCGTCGCGGCTCACTACTGCCTAAAGACTATAGCCCAGTTGCAG
CCGGGCGAGATAATTATGATTAAGAGTGCTTGCCAGGCGATTGGTCAGGCGGCCATTCAGCTAGCTGCCTCCCAA
GATGCCCGGCTGCTGCTCACCACCTCGTCCGAAGAGGAGAGGCGATATCTAGCTTCCCAGTACTGTCAAGATCCG
TCTTCGATCTTCCTGAACGATCATGGTCCATCCATCACTCCGCAAATCCAGACAGCGACCTGCGGCCAAGGCGTT
GACGTTTACCTCAACTGCGACTCCGTGGGTCTGTCCGATATCGACAAGTCGCACGTGTCCGCCTTCGGCCGCATC
GTCGATCTCTATGGCGGCGCCACAGCAAGCAGGCTCTCATTCAATGCCCTAGGTCGCGGAAACATCTCATACACG
GGCGTCGACATGGACATCGTGGTCCAGTCCCGGGTCGGCCTCGTGGAAGAGGCTCTCGAGCATGTAACAGCGAAA
CTGGCTGCTGGGCGGGTGAAGCCCCTGAGCGACGTCAAGGAGATCGGTATTTCAGAAGTCTCCAAGGCCATTTTC
CAGTTCCGGCTTGAAAGCTCAAGACACCCATCCATGTTTGTCGTGCGTCCTCGAGACGATGAGGTCATTCCCATT
TCCATCCGGCCCATCGGCGAGTACAGGCTCGATCCCGACTCGTCCTATCTTCTGGTTGGCGGTTTCGGAGGTATT
GGACGAAGACTTGCCCTCTGGATGCAGTCTCGCGGCGCGCAGAACCTGATATTCATATCGCGATCGGGGCTTAGC
GCTGCTCCGGCCCGGGACCTCTACGGAACGCTCAGGAATTCGCGTGGATGCAAGGTGGAGAGCGTGGCATGCGAC
ATTGCTGACGCTGACGCCGTCAAGGAAGCCTTGGCCAAGGTCTGTAAGACGATGCCGCCCATTAGGGGCTGTATC
CAGTGCTCCATGGTCTTACAGGACTCTATGCTGTTGAATATGTCGCACGGCCAGTTCATGGCTGCCGTTACGCCA
AAAGTAGCCGGCTCCATCAACATCGCCAACAACCTCCCTGCCGCCGGCCTGGACTTCTTCGTCATGCTCTCGGCC
ACAGCCGCCATTTTTGGCAACCGAGGCCAGGCCAACTACACGGCCGCCAATGCCTTTCTGGACGCGTACGCAAGA
CAGCTCGCCGCCAGAGGCCGCCCCGCGACCTCCGTCGGCCTCGGCCGCGTGCTCTCCGTCGGCTGGGTGGCCGAG
AACCAGGAGCGGCTGCCCATGCCCCTGGCGTGCGGCGACATAGCAGAGGATCGCCTCCTGTCCATACTGGAGTAC
CACATGGATCCGAGATGGGGCGCGGCAAAGGCCGTCGACAGTTGCCACACGATTTCCGGCCTGAGGTCCGCCACC
GACTTCGAGCGGGCATCTCTCCCGCTGCCGCCGTTCATGGCCTATCCCCTGTTTACGCATCTCTGCGCCTCGAAG
CCGGAGACAACGGCAGAAACAACGGAGGCGACGGTACCCATTGCGAAATTGCTCAAGACGGCCACGTCCAAGGAG
GAATCCCTCGCGCTGGTTACAGAGGCCACCATTGCCAAGGTCTCCAGAGTCATGGCCGTCTCTCCGAAAGATTTG
GAGTCGCACCGAACACTTTCCTCCTACGGCGTCGACTCTCTCGTCGCAGTGGACTTGAAGGCGTGGTTCAAGAAG
GAGCTTGGTGCCGTGGTCGCGACGCGGGACGTTTTGGGTAAACTTTCGATTCAGGATCTAGCAGAGAAGATTGTT
GAGATCAGTGGTCTGCTGAATTGA
Gene >Hirsu2|5683
ATGTCGGCCATCGTGGCGCGCTCGCCCGAAGAGCCCGTTGCGCCTCGGCAGCCCAAGTGCACGATCATCTACAAC
CCCGGAAGCGCCCTGCAAAGACAGCTGGCAGAGAAGTGCGCCTCTGCGCTGGCGGAGGATCACGAGGCATTCATA
CTGCGGCTCGAAGACGTGGGCTCTGACGGCGCTTTCAACAGCGGCGTGTGCGTCGTCCTCGTCAACTTTCAGGAC
TTGCATCTATGTGACATGACGCAGGGCGAGTTCGAAAAGATCAAGCTGCTGCTCACTACGTGCCTCAATCTCATC
TGGGTCTGCGAGGATCCCAAAGATGAGCCCAAGGCGGCCATGTGTCAGGGCCTGTTGCGGACGGCGAGGTGGGAG
CGAGACCACGACGAAGTCAACTTCCTCACGCTCGGCATCGGCCACCCGCTGCCCAGAATCGAGGTTGCTGCCTCC
GAGATCGTCCGGCTCGTTCGAGCGGCCTTTGAGTGTCGGGGCGTTGTGCCGCGAAACGCCGAATACGTCCTCAGA
AACGGCACGCTCTTCACGAACAGACTGTTCTCGGCTAGAGGCGTAAACCGGGCGATATCCAGACTTGACGAGCCC
ATCACCGAGGCCGTTCCGGTCAAGGATGTAATCGAGCCTATGAGGCTCACGTCAGTCGACCCGCAGAGGTCGCTG
GCCCTGCAGTTCGTCCCCGACGAGCTGGCCAGTGAGCCCCTGGGCCCTCGCGAGGTCCTCATCCAGGTCCATGCT
GCTGGCCTGGGGCGCGATGTGGTTGAAGACGTTGCTCGCTTGATTCCGGGACAAGGCATAGGCCGAGACTGTGTC
GGAATCGTGACGGGCATTGGCTCGTCCGTCGAGCACGTTGCCGTCGGCCATCGCGTCATGGCACTTCGGACGATC
CCTTCGACCGGCTCTCTTCAGAGCGAGCTTCGCACTCGTTGCGAGGCAGTTTGCAGAGTGCCCGAAGGCGTCGGG
TCTCTCGAGGCTGCCACGGTCCCCTACAACTTCGTCGCGGCTCACTACTGCCTAAAGACTATAGCCCAGTTGCAG
CCGGGCGAGATAATTATGATTAAGAGTGCTTGCCAGGCGATTGGTCAGGCGGCCATTCAGCTAGCTGCCTCCCAA
GATGCCCGGCTGCTGCTCACCACCTCGTCCGAAGAGGAGAGGCGATATCTAGCTTCCCAGTACTGTCAAGATCCG
TCTTCGATCTTCCTGAACGATCATGGTCCATCCATCACTCCGCAAATCCAGACAGCGACCTGCGGCCAAGGCGTT
GACGTTTACCTCAACTGCGACTCCGTGGGTCTGTCCGATATCGACAAGTCGCACGTGTCCGCCTTCGGCCGCATC
GTCGATCTCTATGGCGGCGCCACAGCAAGCAGGCTCTCATTCAATGCCCTAGGTCGCGGAAACATCTCATACACG
GGCGTCGACATGGACATCGTGGTCCAGTCCCGGGTCGGCCTCGTGGAAGAGGCTCTCGAGCATGTAACAGCGAAA
CTGGCTGCTGGGCGGGTGAAGCCCCTGAGCGACGTCAAGGAGATCGGTATTTCAGAAGTCTCCAAGGCCATTTTC
CAGTTCCGGCTTGAAAGCTCAAGACACCCATCCATGTTTGTCGTGCGTCCTCGAGACGATGAGGTCATTCCCGTA
AGCACCGGTCCTCACCTCCAGCTCCTGACGAAAACTCCAGTCGGTGCTGACATCAATCCGCCACATGTAGATTTC
CATCCGGCCCATCGGCGAGTACAGGCTCGATCCCGACTCGTCCTATCTTCTGGTTGGCGGTTTCGGAGGTATTGG
ACGAAGACTTGCCCTCTGGATGCAGTCTCGCGGCGCGCAGAACCTGATATTCATATCGCGATCGGGGCTTAGCGC
TGCTCCGGCCCGGGACCTCTACGGAACGCTCAGGAATTCGCGTGGATGCAAGGTGGAGAGCGTGGCATGCGACAT
TGCTGACGCTGACGCCGTCAAGGAAGCCTTGGCCAAGGTCTGTAAGACGATGCCGCCCATTAGGGGCTGTATCCA
GTGCTCCATGGTCTTACAGGTATGTCACCCGCGCAGTATCTCGCTCAATAGTTCGAAGCTGAGCCCTTCACGCAG
GACTCTATGCTGTTGAATATGTCGCACGGCCAGTTCATGGCTGCCGTTACGCCAAAAGTAGCCGGCTCCATCAAC
ATCGCCAACAACCTCCCTGCCGCCGGCCTGGACTTCTTCGTCATGCTCTCGGCCACAGCCGCCATTTTTGGCAAC
CGAGGCCAGGCCAACTACACGGCCGCCAATGCCTTTCTGGACGCGTACGCAAGACAGCTCGCCGCCAGAGGCCGC
CCCGCGACCTCCGTCGGCCTCGGCCGCGTGCTCTCCGTCGGCTGGGTGGCCGAGAACCAGGAGCGGCTGCCCATG
CCCCTGGCGTGCGGCGACATAGCAGAGGATCGCCTCCTGTCCATACTGGAGTACCACATGGATCCGAGATGGGGC
GCGGCAAAGGCCGTCGACAGTTGCCACACGATTTCCGGCCTGAGGTCCGCCACCGACTTCGAGCGGGCATCTCTC
CCGCTGCCGCCGTTCATGGCCTATCCCCTGTTTACGCATCTCTGCGCCTCGAAGCCGGAGACAACGGCAGAAACA
ACGGAGGCGACGGTACCCATTGCGAAATTGCTCAAGACGGCCACGTCCAAGGAGGAATCCCTCGCGCTGGTTACA
GAGGCCACCATTGCCAAGGTCTCCAGAGTCATGGCCGTCTCTCCGAAAGATTTGGAGTCGCACCGAACACTTTCC
TCCTACGGCGTCGACTCTCTCGTCGCAGTGGACTTGAAGGCGTGGTTCAAGAAGGAGCTTGGTGCCGTGGTCGCG
ACGCGGGACGTTTTGGGTAAACTTTCGATTCAGGATCTAGCAGAGAAGATTGTTGAGATCAGTGGTCTGCTGAAT
TGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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