Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5679
Gene name
LocationContig_2852:503..1637
Strand+
Gene length (bp)1134
Transcript length (bp)987
Coding sequence length (bp)987
Protein length (aa) 329

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.5

Transmembrane Domains

Domain # Start End Length
1 44 66 22
2 81 100 19
3 117 139 22
4 154 176 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5679
MPCAFFSARHKTQLPPAGKDQGPERKCQAAPVIASVWRRRRRAVVLALLDLVWLAALYLGSQLAIWALSLGLAPA
ALDSFAAILGMLAVFLAMTAAGSLWPRADALYRSCLRPRVDLINANLGPAFVIPIVLIGQGNVLDGRDIACIVGT
FVCTTLISWTAIFALVLSTLAGINAVARWLARPASRPDAAHPLARLDSGSDRTPRGRRSGTSDESSGSAYRPSYD
SEAILLPSRTDQPPPPPPESPPPPAWETALAANWPGLLALAGLLVGGLPGALAARDERPLDGFALALVWFASVRL
QSLLRASSSSSSSSSSSSSLGVQSASSW*
Coding >Hirsu2|5679
ATGCCGTGCGCCTTCTTTTCCGCCCGACACAAAACTCAGCTGCCCCCGGCCGGAAAGGACCAGGGCCCGGAGAGA
AAGTGCCAGGCAGCACCGGTGATTGCGAGCGTCTGGCGGCGGCGGCGGCGGGCCGTCGTGCTCGCCCTGCTCGAC
CTCGTCTGGCTGGCGGCCCTCTACCTCGGCAGCCAGCTGGCCATCTGGGCGCTGAGCCTGGGCCTGGCCCCGGCC
GCGCTCGACTCCTTCGCCGCCATCCTCGGCATGCTGGCCGTCTTCCTGGCCATGACGGCCGCCGGCTCGCTGTGG
CCCAGGGCCGATGCCCTGTACCGCTCGTGCCTCAGGCCCAGGGTCGACCTCATCAACGCGAACCTGGGCCCGGCC
TTCGTCATCCCCATCGTCTTGATAGGCCAGGGCAACGTGCTGGACGGGCGCGACATAGCCTGCATCGTCGGCACG
TTTGTTTGCACCACCCTGATCTCGTGGACCGCCATATTCGCCCTGGTCCTATCGACCCTGGCCGGCATCAATGCC
GTGGCGCGGTGGCTGGCCCGGCCCGCCAGCCGGCCCGATGCGGCACACCCCCTGGCGAGGCTGGATTCCGGCTCG
GACCGAACGCCGAGGGGCCGCCGCTCCGGCACCTCGGACGAGAGCTCGGGCTCCGCCTACCGGCCCTCCTACGAC
TCCGAGGCCATCCTCCTCCCCAGCCGCACCGACCAGCCGCCGCCGCCGCCGCCCGAGTCGCCGCCGCCGCCGGCC
TGGGAGACGGCCCTGGCGGCGAACTGGCCCGGCCTTCTGGCCCTGGCCGGCCTCCTGGTCGGGGGCTTGCCGGGC
GCGCTGGCGGCGCGCGACGAGCGCCCGCTCGACGGCTTCGCCCTGGCCCTCGTTTGGTTCGCATCCGTGAGGTTG
CAAAGCCTGCTCCGGGCCTCGTCGTCGTCGTCGTCATCGTCGTCGTCGTCGTCGTCTCTGGGCGTCCAGTCGGCG
TCGTCGTGGTAG
Transcript >Hirsu2|5679
ATGCCGTGCGCCTTCTTTTCCGCCCGACACAAAACTCAGCTGCCCCCGGCCGGAAAGGACCAGGGCCCGGAGAGA
AAGTGCCAGGCAGCACCGGTGATTGCGAGCGTCTGGCGGCGGCGGCGGCGGGCCGTCGTGCTCGCCCTGCTCGAC
CTCGTCTGGCTGGCGGCCCTCTACCTCGGCAGCCAGCTGGCCATCTGGGCGCTGAGCCTGGGCCTGGCCCCGGCC
GCGCTCGACTCCTTCGCCGCCATCCTCGGCATGCTGGCCGTCTTCCTGGCCATGACGGCCGCCGGCTCGCTGTGG
CCCAGGGCCGATGCCCTGTACCGCTCGTGCCTCAGGCCCAGGGTCGACCTCATCAACGCGAACCTGGGCCCGGCC
TTCGTCATCCCCATCGTCTTGATAGGCCAGGGCAACGTGCTGGACGGGCGCGACATAGCCTGCATCGTCGGCACG
TTTGTTTGCACCACCCTGATCTCGTGGACCGCCATATTCGCCCTGGTCCTATCGACCCTGGCCGGCATCAATGCC
GTGGCGCGGTGGCTGGCCCGGCCCGCCAGCCGGCCCGATGCGGCACACCCCCTGGCGAGGCTGGATTCCGGCTCG
GACCGAACGCCGAGGGGCCGCCGCTCCGGCACCTCGGACGAGAGCTCGGGCTCCGCCTACCGGCCCTCCTACGAC
TCCGAGGCCATCCTCCTCCCCAGCCGCACCGACCAGCCGCCGCCGCCGCCGCCCGAGTCGCCGCCGCCGCCGGCC
TGGGAGACGGCCCTGGCGGCGAACTGGCCCGGCCTTCTGGCCCTGGCCGGCCTCCTGGTCGGGGGCTTGCCGGGC
GCGCTGGCGGCGCGCGACGAGCGCCCGCTCGACGGCTTCGCCCTGGCCCTCGTTTGGTTCGCATCCGTGAGGTTG
CAAAGCCTGCTCCGGGCCTCGTCGTCGTCGTCGTCATCGTCGTCGTCGTCGTCGTCTCTGGGCGTCCAGTCGGCG
TCGTCGTGGTAG
Gene >Hirsu2|5679
ATGCCGTGCGCCTTCTTTTCCGCCCGACACAAAACTCAGCTGCCCCCGGCCGGAAAGGACCAGGGCCCGGAGAGA
AAGTGCCAGGCAGCACCGGTGATTGCGAGCGTCTGGCGGCGGCGGCGGCGGGCCGTCGTGCTCGCCCTGCTCGAC
CTCGTCTGGCTGGCGGCCCTCTACCTCGGCAGCCAGCTGGCCATCTGGGCGCTGAGCCTGGGCCTGGCCCCGGCC
GCGCTCGACTCCTTCGCCGCCATCCTCGGCATGCTGGCCGTCTTCCTGGCCATGACGGCCGCCGGCTCGCTGTGG
CCCAGGGCCGATGCCCTGTACCGCTCGTGCCTCAGGCCCAGGGTGCGTCGTCTTCCCTTGCTGTCGTCGCCTCCT
TTCGTTGACCGGGTCGTGCGCTTGCGCAGGTCGACCTCATCAACGCGAACCTGGGCCCGGCCTTCGTCATCCCCA
TCGTCTTGATAGGCCAGGGCAACGTGCTGGACGGGCGCGACATAGCCTGCATCGTCGGCACGTTTGGTACATTCC
TCGGCCTTCCCCTTGCCCCTTTCCCCCCTTTTCTTCCTCTTCCGACCGGAGCTGACCGGCTGGCTTGGCTGACCA
GTTTGCACCACCCTGATCTCGTGGACCGCCATATTCGCCCTGGTCCTATCGACCCTGGCCGGCATCAATGCCGTG
GCGCGGTGGCTGGCCCGGCCCGCCAGCCGGCCCGATGCGGCACACCCCCTGGCGAGGCTGGATTCCGGCTCGGAC
CGAACGCCGAGGGGCCGCCGCTCCGGCACCTCGGACGAGAGCTCGGGCTCCGCCTACCGGCCCTCCTACGACTCC
GAGGCCATCCTCCTCCCCAGCCGCACCGACCAGCCGCCGCCGCCGCCGCCCGAGTCGCCGCCGCCGCCGGCCTGG
GAGACGGCCCTGGCGGCGAACTGGCCCGGCCTTCTGGCCCTGGCCGGCCTCCTGGTCGGGGGCTTGCCGGGCGCG
CTGGCGGCGCGCGACGAGCGCCCGCTCGACGGCTTCGCCCTGGCCCTCGTTTGGTTCGCATCCGTGAGGTTGCAA
AGCCTGCTCCGGGCCTCGTCGTCGTCGTCGTCATCGTCGTCGTCGTCGTCGTCTCTGGGCGTCCAGTCGGCGTCG
TCGTGGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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