© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5679 |
| Gene name | |
| Location | Contig_2852:503..1637 |
| Strand | + |
| Gene length (bp) | 1134 |
| Transcript length (bp) | 987 |
| Coding sequence length (bp) | 987 |
| Protein length (aa) | 329 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 66 | 22 |
| 2 | 81 | 100 | 19 |
| 3 | 117 | 139 | 22 |
| 4 | 154 | 176 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5679 MPCAFFSARHKTQLPPAGKDQGPERKCQAAPVIASVWRRRRRAVVLALLDLVWLAALYLGSQLAIWALSLGLAPA ALDSFAAILGMLAVFLAMTAAGSLWPRADALYRSCLRPRVDLINANLGPAFVIPIVLIGQGNVLDGRDIACIVGT FVCTTLISWTAIFALVLSTLAGINAVARWLARPASRPDAAHPLARLDSGSDRTPRGRRSGTSDESSGSAYRPSYD SEAILLPSRTDQPPPPPPESPPPPAWETALAANWPGLLALAGLLVGGLPGALAARDERPLDGFALALVWFASVRL QSLLRASSSSSSSSSSSSSLGVQSASSW* |
| Coding | >Hirsu2|5679 ATGCCGTGCGCCTTCTTTTCCGCCCGACACAAAACTCAGCTGCCCCCGGCCGGAAAGGACCAGGGCCCGGAGAGA AAGTGCCAGGCAGCACCGGTGATTGCGAGCGTCTGGCGGCGGCGGCGGCGGGCCGTCGTGCTCGCCCTGCTCGAC CTCGTCTGGCTGGCGGCCCTCTACCTCGGCAGCCAGCTGGCCATCTGGGCGCTGAGCCTGGGCCTGGCCCCGGCC GCGCTCGACTCCTTCGCCGCCATCCTCGGCATGCTGGCCGTCTTCCTGGCCATGACGGCCGCCGGCTCGCTGTGG CCCAGGGCCGATGCCCTGTACCGCTCGTGCCTCAGGCCCAGGGTCGACCTCATCAACGCGAACCTGGGCCCGGCC TTCGTCATCCCCATCGTCTTGATAGGCCAGGGCAACGTGCTGGACGGGCGCGACATAGCCTGCATCGTCGGCACG TTTGTTTGCACCACCCTGATCTCGTGGACCGCCATATTCGCCCTGGTCCTATCGACCCTGGCCGGCATCAATGCC GTGGCGCGGTGGCTGGCCCGGCCCGCCAGCCGGCCCGATGCGGCACACCCCCTGGCGAGGCTGGATTCCGGCTCG GACCGAACGCCGAGGGGCCGCCGCTCCGGCACCTCGGACGAGAGCTCGGGCTCCGCCTACCGGCCCTCCTACGAC TCCGAGGCCATCCTCCTCCCCAGCCGCACCGACCAGCCGCCGCCGCCGCCGCCCGAGTCGCCGCCGCCGCCGGCC TGGGAGACGGCCCTGGCGGCGAACTGGCCCGGCCTTCTGGCCCTGGCCGGCCTCCTGGTCGGGGGCTTGCCGGGC GCGCTGGCGGCGCGCGACGAGCGCCCGCTCGACGGCTTCGCCCTGGCCCTCGTTTGGTTCGCATCCGTGAGGTTG CAAAGCCTGCTCCGGGCCTCGTCGTCGTCGTCGTCATCGTCGTCGTCGTCGTCGTCTCTGGGCGTCCAGTCGGCG TCGTCGTGGTAG |
| Transcript | >Hirsu2|5679 ATGCCGTGCGCCTTCTTTTCCGCCCGACACAAAACTCAGCTGCCCCCGGCCGGAAAGGACCAGGGCCCGGAGAGA AAGTGCCAGGCAGCACCGGTGATTGCGAGCGTCTGGCGGCGGCGGCGGCGGGCCGTCGTGCTCGCCCTGCTCGAC CTCGTCTGGCTGGCGGCCCTCTACCTCGGCAGCCAGCTGGCCATCTGGGCGCTGAGCCTGGGCCTGGCCCCGGCC GCGCTCGACTCCTTCGCCGCCATCCTCGGCATGCTGGCCGTCTTCCTGGCCATGACGGCCGCCGGCTCGCTGTGG CCCAGGGCCGATGCCCTGTACCGCTCGTGCCTCAGGCCCAGGGTCGACCTCATCAACGCGAACCTGGGCCCGGCC TTCGTCATCCCCATCGTCTTGATAGGCCAGGGCAACGTGCTGGACGGGCGCGACATAGCCTGCATCGTCGGCACG TTTGTTTGCACCACCCTGATCTCGTGGACCGCCATATTCGCCCTGGTCCTATCGACCCTGGCCGGCATCAATGCC GTGGCGCGGTGGCTGGCCCGGCCCGCCAGCCGGCCCGATGCGGCACACCCCCTGGCGAGGCTGGATTCCGGCTCG GACCGAACGCCGAGGGGCCGCCGCTCCGGCACCTCGGACGAGAGCTCGGGCTCCGCCTACCGGCCCTCCTACGAC TCCGAGGCCATCCTCCTCCCCAGCCGCACCGACCAGCCGCCGCCGCCGCCGCCCGAGTCGCCGCCGCCGCCGGCC TGGGAGACGGCCCTGGCGGCGAACTGGCCCGGCCTTCTGGCCCTGGCCGGCCTCCTGGTCGGGGGCTTGCCGGGC GCGCTGGCGGCGCGCGACGAGCGCCCGCTCGACGGCTTCGCCCTGGCCCTCGTTTGGTTCGCATCCGTGAGGTTG CAAAGCCTGCTCCGGGCCTCGTCGTCGTCGTCGTCATCGTCGTCGTCGTCGTCGTCTCTGGGCGTCCAGTCGGCG TCGTCGTGGTAG |
| Gene | >Hirsu2|5679 ATGCCGTGCGCCTTCTTTTCCGCCCGACACAAAACTCAGCTGCCCCCGGCCGGAAAGGACCAGGGCCCGGAGAGA AAGTGCCAGGCAGCACCGGTGATTGCGAGCGTCTGGCGGCGGCGGCGGCGGGCCGTCGTGCTCGCCCTGCTCGAC CTCGTCTGGCTGGCGGCCCTCTACCTCGGCAGCCAGCTGGCCATCTGGGCGCTGAGCCTGGGCCTGGCCCCGGCC GCGCTCGACTCCTTCGCCGCCATCCTCGGCATGCTGGCCGTCTTCCTGGCCATGACGGCCGCCGGCTCGCTGTGG CCCAGGGCCGATGCCCTGTACCGCTCGTGCCTCAGGCCCAGGGTGCGTCGTCTTCCCTTGCTGTCGTCGCCTCCT TTCGTTGACCGGGTCGTGCGCTTGCGCAGGTCGACCTCATCAACGCGAACCTGGGCCCGGCCTTCGTCATCCCCA TCGTCTTGATAGGCCAGGGCAACGTGCTGGACGGGCGCGACATAGCCTGCATCGTCGGCACGTTTGGTACATTCC TCGGCCTTCCCCTTGCCCCTTTCCCCCCTTTTCTTCCTCTTCCGACCGGAGCTGACCGGCTGGCTTGGCTGACCA GTTTGCACCACCCTGATCTCGTGGACCGCCATATTCGCCCTGGTCCTATCGACCCTGGCCGGCATCAATGCCGTG GCGCGGTGGCTGGCCCGGCCCGCCAGCCGGCCCGATGCGGCACACCCCCTGGCGAGGCTGGATTCCGGCTCGGAC CGAACGCCGAGGGGCCGCCGCTCCGGCACCTCGGACGAGAGCTCGGGCTCCGCCTACCGGCCCTCCTACGACTCC GAGGCCATCCTCCTCCCCAGCCGCACCGACCAGCCGCCGCCGCCGCCGCCCGAGTCGCCGCCGCCGCCGGCCTGG GAGACGGCCCTGGCGGCGAACTGGCCCGGCCTTCTGGCCCTGGCCGGCCTCCTGGTCGGGGGCTTGCCGGGCGCG CTGGCGGCGCGCGACGAGCGCCCGCTCGACGGCTTCGCCCTGGCCCTCGTTTGGTTCGCATCCGTGAGGTTGCAA AGCCTGCTCCGGGCCTCGTCGTCGTCGTCGTCATCGTCGTCGTCGTCGTCGTCTCTGGGCGTCCAGTCGGCGTCG TCGTGGTAG |