© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5675 |
| Gene name | |
| Location | Contig_285:16925..17659 |
| Strand | + |
| Gene length (bp) | 734 |
| Transcript length (bp) | 450 |
| Coding sequence length (bp) | 450 |
| Protein length (aa) | 150 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0771 | 0.0455 | 0.9661 | 0.0365 | 0.1091 | 0.0071 | 0.0502 | 0.0606 | 0.0296 | 0.0052 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 19 | 0.99978 |
| Orthofinder run ID | 4 |
| Orthogroup | 7636 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|4132 |
| Ophiocordyceps subramaniannii | Hirsu2|5675 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5675 MKTVAALAALFASLAVASGDRCPEPQPCLYRADCVEVVNGCAICKPECRVGCPAPVACLRRADCTEEINGCTVCK AECTVGKCPPPTPCLARAGCTEEVNGCTVCKPECGGRRQCPPPTPCLARADCTEEINGCTVCKPECGGRGHKGQ* |
| Coding | >Hirsu2|5675 ATGAAGACCGTTGCCGCTCTCGCCGCTCTCTTTGCCAGCCTGGCCGTGGCCAGCGGCGATCGCTGCCCTGAGCCC CAGCCCTGCCTGTACCGCGCCGACTGCGTCGAGGTCGTCAACGGCTGCGCCATCTGCAAGCCCGAGTGCCGTGTT GGCTGCCCTGCTCCCGTGGCTTGCCTCCGTCGCGCCGACTGCACCGAGGAAATCAACGGCTGCACCGTCTGCAAG GCTGAATGCACCGTTGGCAAATGCCCCCCTCCGACTCCTTGCCTCGCCCGCGCCGGCTGCACCGAGGAAGTCAAC GGCTGCACCGTCTGCAAGCCCGAGTGCGGTGGACGCCGGCAGTGCCCCCCTCCTACCCCCTGCCTCGCCCGCGCC GACTGCACCGAGGAAATCAACGGCTGCACCGTCTGCAAGCCCGAGTGCGGCGGCCGTGGCCACAAGGGCCAGTAG |
| Transcript | >Hirsu2|5675 ATGAAGACCGTTGCCGCTCTCGCCGCTCTCTTTGCCAGCCTGGCCGTGGCCAGCGGCGATCGCTGCCCTGAGCCC CAGCCCTGCCTGTACCGCGCCGACTGCGTCGAGGTCGTCAACGGCTGCGCCATCTGCAAGCCCGAGTGCCGTGTT GGCTGCCCTGCTCCCGTGGCTTGCCTCCGTCGCGCCGACTGCACCGAGGAAATCAACGGCTGCACCGTCTGCAAG GCTGAATGCACCGTTGGCAAATGCCCCCCTCCGACTCCTTGCCTCGCCCGCGCCGGCTGCACCGAGGAAGTCAAC GGCTGCACCGTCTGCAAGCCCGAGTGCGGTGGACGCCGGCAGTGCCCCCCTCCTACCCCCTGCCTCGCCCGCGCC GACTGCACCGAGGAAATCAACGGCTGCACCGTCTGCAAGCCCGAGTGCGGCGGCCGTGGCCACAAGGGCCAGTAG |
| Gene | >Hirsu2|5675 ATGAAGACCGTTGCCGCTCTCGCCGCTCTCTTTGCCAGCCTGGCCGTGGCCAGCGGCGATCGCTGCCCTGAGCCC CAGGTGAGTCTCTGATCCGCGGGGCTTGCGAGGGAAGAGTCGTTCTGGTTGAGTGAAGCTTCTAACCCCAACCCT GCAGCCCTGCCTGTACCGCGCCGACTGCGTCGAGGTCGTCAACGGCTGCGCCATCTGCAAGCCCGAGTGCCGTGT TGGCTGCCCTGCTCCCGTGGTACGTTCATGACTCACGAAGAACAAGCAGGTGGCCGTATGAGCGCTTGACACTGA TCATAGCTCTGCTGAAAACCAGGCTTGCCTCCGTCGCGCCGACTGCACCGAGGAAATCAACGGCTGCACCGTCTG CAAGGCTGAATGCACCGTTGGCAAATGCCCCCCTCCGACTGTAAGCATGATCTATTCGTGGAATTTGAAGAGAGA AGCTCGTGCTGATGGAAACCCACGAAACAGCCTTGCCTCGCCCGCGCCGGCTGCACCGAGGAAGTCAACGGCTGC ACCGTCTGCAAGCCCGAGTGCGGTGGACGCCGGCAGTGCCCCCCTCCTACCGTACGCATGACCGATCCGTGACAA GTGAAGAGAGAATGTTGTGCTGATGGAAACCCACGAAACAGCCCTGCCTCGCCCGCGCCGACTGCACCGAGGAAA TCAACGGCTGCACCGTCTGCAAGCCCGAGTGCGGCGGCCGTGGCCACAAGGGCCAGTAG |