© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5669 |
| Gene name | |
| Location | Contig_285:595..1991 |
| Strand | - |
| Gene length (bp) | 1396 |
| Transcript length (bp) | 1170 |
| Coding sequence length (bp) | 1170 |
| Protein length (aa) | 390 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 9.2E-17 | 7 | 312 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 8.4E-09 | 235 | 380 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08280|BSC6_YEAST | Bypass of stop codon protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BSC6 PE=1 SV=1 | 2 | 360 | 4.0E-19 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 37 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 47 | 69 | 22 |
| 3 | 76 | 98 | 22 |
| 4 | 113 | 135 | 22 |
| 5 | 195 | 217 | 22 |
| 6 | 227 | 249 | 22 |
| 7 | 256 | 278 | 22 |
| 8 | 283 | 305 | 22 |
| 9 | 318 | 340 | 22 |
| 10 | 345 | 367 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5669 MDQTPPLSPLLETDFRLTYTVVSLVFLSPFVGYTLASAVNNLVHVRLGQRGVACLAPAFHLVPFLAISFRPPYPA LVVLYTLVGFGNGLTDAAWCAWIGNMADTHEVTGLLQASYALGATVAPLLATAMISQAGLGWWSFHYVMVGASAV ELVSCASTFWAQTGAVYLAENPHPQHGTTARSGRTLQALSNKFTWLFSLFIFLYNGAEVSLGGWLVVFMTKVRHA SSFAGGATATGFWGGMTAGRLVLSLVTARLGEFRAMILYLALAIAVELVFWLVPHMVVSAVAAALLGLITGPMYP TAIVLMTKLLPRALHVSALGFATAFGGSGAAILPFAVGAIAQARGVQSLQPIVLAICVVLAVIWGVVHHLDPRKK KEDVSVGVGSSETI* |
| Coding | >Hirsu2|5669 ATGGACCAAACTCCCCCCCTGAGCCCCTTGCTGGAGACGGACTTCCGGCTGACGTACACGGTCGTCTCGCTCGTC TTCCTCTCGCCCTTCGTCGGCTACACGCTGGCCTCGGCCGTCAACAACCTGGTGCACGTCCGGCTGGGCCAGCGC GGCGTCGCCTGCCTGGCGCCGGCCTTCCACCTCGTGCCCTTCCTGGCCATCTCCTTCCGGCCGCCGTACCCGGCG CTGGTGGTGCTGTACACGCTGGTCGGCTTCGGCAACGGCCTCACCGACGCCGCCTGGTGCGCCTGGATCGGCAAC ATGGCCGACACGCACGAGGTCACCGGCCTTCTGCAGGCGAGCTATGCCCTGGGCGCGACCGTCGCTCCGCTCCTC GCCACGGCCATGATCTCGCAGGCAGGTCTGGGCTGGTGGTCGTTCCACTACGTCATGGTCGGAGCCTCGGCCGTC GAGCTCGTCAGCTGCGCCAGCACCTTCTGGGCCCAGACCGGCGCCGTCTACCTGGCCGAGAACCCGCACCCGCAG CACGGGACGACGGCCCGGTCCGGGCGCACGCTGCAGGCCCTGAGCAACAAGTTCACCTGGCTCTTCTCGCTCTTC ATCTTCCTCTACAACGGCGCCGAGGTCTCGCTCGGCGGCTGGCTCGTCGTCTTCATGACCAAGGTCCGGCACGCC TCCTCCTTCGCCGGCGGCGCCACCGCCACCGGCTTCTGGGGCGGCATGACGGCCGGCCGCCTCGTCCTCTCCCTC GTCACCGCCCGCCTGGGCGAGTTTCGCGCCATGATCCTATATCTCGCTCTGGCCATCGCCGTCGAGCTGGTCTTC TGGCTGGTCCCGCACATGGTCGTCAGTGCCGTTGCGGCGGCGCTTCTCGGCCTCATCACCGGGCCCATGTATCCC ACGGCCATCGTGCTCATGACGAAGCTGCTCCCCCGGGCCCTGCATGTCAGCGCCCTGGGCTTCGCCACGGCCTTT GGCGGCTCTGGCGCGGCCATCCTGCCCTTTGCGGTGGGTGCCATCGCTCAGGCCAGAGGCGTGCAGTCGCTGCAG CCCATCGTCCTCGCCATCTGCGTAGTGCTAGCTGTCATCTGGGGCGTGGTGCACCATCTTGATCCTCGAAAGAAA AAGGAAGACGTAAGCGTCGGGGTCGGGTCCTCGGAGACGATATAG |
| Transcript | >Hirsu2|5669 ATGGACCAAACTCCCCCCCTGAGCCCCTTGCTGGAGACGGACTTCCGGCTGACGTACACGGTCGTCTCGCTCGTC TTCCTCTCGCCCTTCGTCGGCTACACGCTGGCCTCGGCCGTCAACAACCTGGTGCACGTCCGGCTGGGCCAGCGC GGCGTCGCCTGCCTGGCGCCGGCCTTCCACCTCGTGCCCTTCCTGGCCATCTCCTTCCGGCCGCCGTACCCGGCG CTGGTGGTGCTGTACACGCTGGTCGGCTTCGGCAACGGCCTCACCGACGCCGCCTGGTGCGCCTGGATCGGCAAC ATGGCCGACACGCACGAGGTCACCGGCCTTCTGCAGGCGAGCTATGCCCTGGGCGCGACCGTCGCTCCGCTCCTC GCCACGGCCATGATCTCGCAGGCAGGTCTGGGCTGGTGGTCGTTCCACTACGTCATGGTCGGAGCCTCGGCCGTC GAGCTCGTCAGCTGCGCCAGCACCTTCTGGGCCCAGACCGGCGCCGTCTACCTGGCCGAGAACCCGCACCCGCAG CACGGGACGACGGCCCGGTCCGGGCGCACGCTGCAGGCCCTGAGCAACAAGTTCACCTGGCTCTTCTCGCTCTTC ATCTTCCTCTACAACGGCGCCGAGGTCTCGCTCGGCGGCTGGCTCGTCGTCTTCATGACCAAGGTCCGGCACGCC TCCTCCTTCGCCGGCGGCGCCACCGCCACCGGCTTCTGGGGCGGCATGACGGCCGGCCGCCTCGTCCTCTCCCTC GTCACCGCCCGCCTGGGCGAGTTTCGCGCCATGATCCTATATCTCGCTCTGGCCATCGCCGTCGAGCTGGTCTTC TGGCTGGTCCCGCACATGGTCGTCAGTGCCGTTGCGGCGGCGCTTCTCGGCCTCATCACCGGGCCCATGTATCCC ACGGCCATCGTGCTCATGACGAAGCTGCTCCCCCGGGCCCTGCATGTCAGCGCCCTGGGCTTCGCCACGGCCTTT GGCGGCTCTGGCGCGGCCATCCTGCCCTTTGCGGTGGGTGCCATCGCTCAGGCCAGAGGCGTGCAGTCGCTGCAG CCCATCGTCCTCGCCATCTGCGTAGTGCTAGCTGTCATCTGGGGCGTGGTGCACCATCTTGATCCTCGAAAGAAA AAGGAAGACGTAAGCGTCGGGGTCGGGTCCTCGGAGACGATATAG |
| Gene | >Hirsu2|5669 ATGGACCAAACTCCCCCCCTGAGCCCCTTGGTTTGACGCTCGCTCGCTGACGGGACACGCCATGTCTTGATAGCT GGAGACGGACTTCCGGCTGACGTACACGGTCGTCTCGCTCGTCTTCCTCTCGCCCTTCGTCGGCTACACGCTGGC CTCGGCCGTCAACAACCTGGTGCACGTCCGGCTGGGCCAGCGCGGCGTCGCCTGCCTGGCGCCGGCCTTCCACCT CGTGCCCTTCCTGGCCATCTCCTTCCGGCCGCCGTACCCGGCGCTGGTGGTGCTGTACACGCTGGTCGGCTTCGG CAACGGCCTCACCGACGCCGCCTGGTGCGCCTGGATCGGCAACATGGCCGACACGCACGAGGTCACCGGCCTTCT GCAGGCGAGCTATGCCCTGGGCGCGACCGTCGCTCCGCTCCTCGCCACGGCCATGATCTCGCAGGCAGGTCTGGG CTGGTGGTCGTTCCACTACGTCATGGTATGTGCAATGAGCCAGCCCCTTGCTTGAACCCTTCCTCTCTCCCTTTC TCTCAAGCCCTGAAAGTCTCGGCTTGACCGTTGATGATTTCCCGGCTTCAGGTCGGAGCCTCGGCCGTCGAGCTC GTCAGCTGCGCCAGCACCTTCTGGGCCCAGACCGGCGCCGTCTACCTGGCCGAGAACCCGCACCCGCAGCACGGG ACGACGGCCCGGTCCGGGCGCACGCTGCAGGCCCTGAGCAACAAGTTCACCTGGCTCTTCTCGCTCTTCATCTTC CTCTACAACGGCGCCGAGGTCTCGCTCGGCGGCTGGCTCGTCGTCTTCATGACCAAGGTCCGGCACGCCTCCTCC TTCGCCGGCGGCGCCACCGCCACCGGCTTCTGGGGCGGCATGACGGCCGGCCGCCTCGTCCTCTCCCTCGTCACC GCCCGCCTGGGCGAGTTTCGCGCCATGATCCTATATCTCGCTCTGGCCATCGCCGTCGAGCTGGTCTTCTGGCTG GTCCCGCACATGGTCGTCAGTGCCGTTGCGGCGGCGCTTCTCGGCCTCATCACCGGTACGTTTCGACCAGTCTAC GTTACTTGTATATTCAGTTGCTGTCCTTTTCGAGGCGCATCCGGCTGACGGAGATTGCAAAGGGCCCATGTATCC CACGGCCATCGTGCTCATGACGAAGCTGCTCCCCCGGGCCCTGCATGTCAGCGCCCTGGGCTTCGCCACGGCCTT TGGCGGCTCTGGCGCGGCCATCCTGCCCTTTGCGGTGGGTGCCATCGCTCAGGCCAGAGGCGTGCAGTCGCTGCA GCCCATCGTCCTCGCCATCTGCGTAGTGCTAGCTGTCATCTGGGGCGTGGTGCACCATCTTGATCCTCGAAAGAA AAAGGAAGACGTAAGCGTCGGGGTCGGGTCCTCGGAGACGATATAG |