Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5668
Gene name
LocationContig_285:52..337
Strand+
Gene length (bp)285
Transcript length (bp)285
Coding sequence length (bp)285
Protein length (aa) 95

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13242 Hydrolase_like HAD-hyrolase-like 2.0E-09 6 62
PF13419 HAD_2 Haloacid dehalogenase-like hydrolase 5.8E-07 4 49

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.6894 0.5407 0.0147 0.115 0.4193 0.0103 0.1466 0.1037 0.1351 0.0154

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup471
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2267
Ophiocordyceps australis map64 (Brazil) OphauB2|6005
Ophiocordyceps camponoti-floridani Ophcf2|06791
Ophiocordyceps camponoti-rufipedis Ophun1|6209
Ophiocordyceps kimflemingae Ophio5|6811
Ophiocordyceps subramaniannii Hirsu2|10371
Ophiocordyceps subramaniannii Hirsu2|3539
Ophiocordyceps subramaniannii Hirsu2|5668 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5668
LPVPVSKPDPAIYRHALACLGARAAECVAVEDSRSGVLAARGAGLRTVGYTGAYEPAEREALARLLTEAGCELVM
GHWSDFGACLERMEKGAGD*
Coding >Hirsu2|5668
CTGCCCGTGCCCGTCTCCAAGCCGGACCCGGCCATCTACCGGCACGCGCTGGCCTGCCTGGGCGCCCGCGCGGCC
GAGTGCGTCGCCGTCGAGGACAGCCGCTCCGGCGTGCTGGCGGCCAGGGGCGCTGGCCTCCGCACCGTCGGCTAC
ACGGGCGCCTACGAGCCGGCGGAGCGCGAGGCGCTGGCCCGCCTGCTGACCGAGGCCGGCTGCGAGCTGGTCATG
GGCCACTGGTCCGACTTTGGCGCCTGTCTCGAGAGGATGGAGAAGGGCGCTGGGGATTGA
Transcript >Hirsu2|5668
CTGCCCGTGCCCGTCTCCAAGCCGGACCCGGCCATCTACCGGCACGCGCTGGCCTGCCTGGGCGCCCGCGCGGCC
GAGTGCGTCGCCGTCGAGGACAGCCGCTCCGGCGTGCTGGCGGCCAGGGGCGCTGGCCTCCGCACCGTCGGCTAC
ACGGGCGCCTACGAGCCGGCGGAGCGCGAGGCGCTGGCCCGCCTGCTGACCGAGGCCGGCTGCGAGCTGGTCATG
GGCCACTGGTCCGACTTTGGCGCCTGTCTCGAGAGGATGGAGAAGGGCGCTGGGGATTGA
Gene >Hirsu2|5668
CTGCCCGTGCCCGTCTCCAAGCCGGACCCGGCCATCTACCGGCACGCGCTGGCCTGCCTGGGCGCCCGCGCGGCC
GAGTGCGTCGCCGTCGAGGACAGCCGCTCCGGCGTGCTGGCGGCCAGGGGCGCTGGCCTCCGCACCGTCGGCTAC
ACGGGCGCCTACGAGCCGGCGGAGCGCGAGGCGCTGGCCCGCCTGCTGACCGAGGCCGGCTGCGAGCTGGTCATG
GGCCACTGGTCCGACTTTGGCGCCTGTCTCGAGAGGATGGAGAAGGGCGCTGGGGATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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