Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5662
Gene name
LocationContig_2842:414..1718
Strand-
Gene length (bp)1304
Transcript length (bp)1083
Coding sequence length (bp)1083
Protein length (aa) 361

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 7.7E-12 2 232

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0006351 transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0008270 zinc ion binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901360 organic cyclic compound metabolic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0009987 cellular process No
GO:1901363 heterocyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003676 nucleic acid binding No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0005488 binding No
GO:0044249 cellular biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008150 biological_process No
GO:0046483 heterocycle metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0043170 macromolecule metabolic process No
GO:0044237 cellular metabolic process No
GO:0046914 transition metal ion binding No
GO:1901576 organic substance biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003674 molecular_function No
GO:0019438 aromatic compound biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0008152 metabolic process No
GO:0046872 metal ion binding No
GO:0043167 ion binding No
GO:0044238 primary metabolic process No
GO:0043169 cation binding No
GO:0016070 RNA metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0090304 nucleic acid metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5662
LPFLDESDVLKQIDRIDGLGQGWPAASRSTQALLSIIFAHALHTLDGRPPEPFYRRALGLLDEKTVYIPTVDSLQ
ALLLLASFQQNTQRSMESWAPHYLAVRVSYQLGIHAPASYDYLGSQDKEIRSRLWFAVVNQDRILTAGLARPSLI
PAQHVRMDLAELLDPSRPNRTAEMACPKESLVYFRHLISLHEILGMTVDSIYSANISSSSRLALGELVAKTVDLS
WRLEQWRDGVGGISPNADFTSWSAAAFDSERYAILLSIFHYRSMMLMHGSLLMRVLERVTGSGQDASSGALQDAA
LSLLRNYLRAIREWLRLISGILRHRRSFLNGNAVWWTSNYMSMAPLGFLPIAFSLPVFLL*
Coding >Hirsu2|5662
CTGCCCTTCCTCGACGAGTCGGACGTGCTCAAGCAGATCGACCGGATCGACGGCCTGGGCCAGGGCTGGCCGGCG
GCCTCGCGCTCGACCCAGGCGCTGCTCAGCATCATCTTCGCCCACGCGCTGCACACGCTCGACGGCCGCCCGCCC
GAGCCCTTCTACCGCCGCGCCCTGGGCCTGCTGGACGAGAAGACGGTCTACATCCCGACGGTCGACTCGCTCCAA
GCGCTGCTGCTCCTCGCCAGCTTCCAGCAGAACACGCAGCGGTCGATGGAGAGCTGGGCGCCGCACTACCTCGCC
GTCCGCGTCTCGTACCAGCTCGGCATCCACGCCCCGGCCTCGTACGACTACCTCGGCAGCCAGGACAAGGAGATC
CGGTCGCGGCTGTGGTTCGCCGTCGTCAACCAGGACAGGATCCTGACGGCCGGCCTGGCCCGTCCGTCGCTCATC
CCGGCGCAGCACGTCCGCATGGACCTGGCCGAGCTGCTCGACCCGTCGCGGCCCAACAGGACGGCCGAGATGGCG
TGTCCGAAGGAGAGCCTGGTCTACTTCCGCCACCTGATCTCGCTGCATGAGATCCTGGGCATGACCGTCGACTCC
ATCTACAGCGCCAACATCAGCTCGTCCAGCCGGCTGGCGCTCGGCGAGCTCGTCGCCAAGACGGTCGACCTGTCG
TGGCGGCTGGAGCAGTGGCGCGACGGCGTGGGCGGCATCAGTCCCAACGCCGACTTCACCAGCTGGTCGGCCGCC
GCCTTCGACTCGGAGCGCTACGCCATCCTGCTGTCCATCTTCCACTACCGGTCCATGATGCTGATGCACGGCTCG
CTGCTCATGCGCGTCCTGGAGCGCGTCACCGGCTCCGGCCAGGACGCCTCGTCGGGCGCGCTGCAGGACGCCGCC
CTTTCGCTGCTGCGCAACTACCTGCGGGCCATCCGCGAGTGGCTTCGCCTCATCAGCGGCATCCTCCGCCACCGG
CGCTCGTTCCTGAACGGCAACGCCGTCTGGTGGACCAGCAACTACATGAGTATGGCCCCCCTTGGCTTCCTTCCC
ATCGCCTTCTCTCTTCCCGTCTTTCTTCTCTGA
Transcript >Hirsu2|5662
CTGCCCTTCCTCGACGAGTCGGACGTGCTCAAGCAGATCGACCGGATCGACGGCCTGGGCCAGGGCTGGCCGGCG
GCCTCGCGCTCGACCCAGGCGCTGCTCAGCATCATCTTCGCCCACGCGCTGCACACGCTCGACGGCCGCCCGCCC
GAGCCCTTCTACCGCCGCGCCCTGGGCCTGCTGGACGAGAAGACGGTCTACATCCCGACGGTCGACTCGCTCCAA
GCGCTGCTGCTCCTCGCCAGCTTCCAGCAGAACACGCAGCGGTCGATGGAGAGCTGGGCGCCGCACTACCTCGCC
GTCCGCGTCTCGTACCAGCTCGGCATCCACGCCCCGGCCTCGTACGACTACCTCGGCAGCCAGGACAAGGAGATC
CGGTCGCGGCTGTGGTTCGCCGTCGTCAACCAGGACAGGATCCTGACGGCCGGCCTGGCCCGTCCGTCGCTCATC
CCGGCGCAGCACGTCCGCATGGACCTGGCCGAGCTGCTCGACCCGTCGCGGCCCAACAGGACGGCCGAGATGGCG
TGTCCGAAGGAGAGCCTGGTCTACTTCCGCCACCTGATCTCGCTGCATGAGATCCTGGGCATGACCGTCGACTCC
ATCTACAGCGCCAACATCAGCTCGTCCAGCCGGCTGGCGCTCGGCGAGCTCGTCGCCAAGACGGTCGACCTGTCG
TGGCGGCTGGAGCAGTGGCGCGACGGCGTGGGCGGCATCAGTCCCAACGCCGACTTCACCAGCTGGTCGGCCGCC
GCCTTCGACTCGGAGCGCTACGCCATCCTGCTGTCCATCTTCCACTACCGGTCCATGATGCTGATGCACGGCTCG
CTGCTCATGCGCGTCCTGGAGCGCGTCACCGGCTCCGGCCAGGACGCCTCGTCGGGCGCGCTGCAGGACGCCGCC
CTTTCGCTGCTGCGCAACTACCTGCGGGCCATCCGCGAGTGGCTTCGCCTCATCAGCGGCATCCTCCGCCACCGG
CGCTCGTTCCTGAACGGCAACGCCGTCTGGTGGACCAGCAACTACATGAGTATGGCCCCCCTTGGCTTCCTTCCC
ATCGCCTTCTCTCTTCCCGTCTTTCTTCTCTGA
Gene >Hirsu2|5662
CTGCCCTTCCTCGACGAGTCGGACGTGCTCAAGCAGATCGACCGGATCGACGGCCTGGGCCAGGGCTGGCCGGCG
GCCTCGCGCTCGACCCAGGCGCTGCTCAGCATCATCTTCGCCCACGCGCTGCACACGCTCGACGGCCGCCCGCCC
GAGCCCTTCTACCGCCGCGCCCTGGGCCTGCTGGACGAGAAGACGGTCTACATCCCGACGGTCGACTCGCGTGCG
TTGCTCCCCTCCCTCTCTCTCTCCCTCCCTCTCCTCTTCCGCCTCTCCCGTCCGATGCTGAGACCGGCCAGTCCA
AGCGCTGCTGCTCCTCGCCAGCTTCCAGCAGAACACGCAGCGGTCGATGGAGAGCTGGGCGCCGCACTACCTCGC
CGTCCGCGTCTCGTACCAGCTCGGCATCCACGCCCCGGCCTCGTACGACTACCTCGGCAGCCAGGACAAGGAGAT
CCGGTCGCGGCTGTGGTTCGCCGTCGTCAACCAGGACAGGTGCGCGCCGGCCCTCCGTGCCGCTTGTCTCTCCCG
CCCGCTGACGTCGTCGGTGCCGGCTTCGCAGGATCCTGACGGCCGGCCTGGCCCGTCCGTCGCTCATCCCGGCGC
AGCACGTCCGCATGGACCTGGCCGAGCTGCTCGACCCGTCGCGGCCCAACAGGACGGCCGAGATGGCGTGTCCGA
AGGAGAGCCTGGTCTACTTCCGCCACCTGATGTACGTTTTGCTGCGGGCCGGCTCTCATCATCTCCCTCTCTCTC
TGCTGACGCCCGTCGCCCTTTTTTCTTTGCCAAGCTCGCTGCATGAGATCCTGGGCATGACCGTCGACTCCATCT
ACAGCGCCAACATCAGCTCGTCCAGCCGGCTGGCGCTCGGCGAGCTCGTCGCCAAGACGGTCGACCTGTCGTGGC
GGCTGGAGCAGTGGCGCGACGGCGTGGGCGGCATCAGTCCCAACGCCGACTTCACCAGCTGGTCGGCCGCCGCCT
TCGACTCGGAGCGCTACGCCATCCTGCTGTCCATCTTCCACTACCGGTCCATGATGCTGATGCACGGCTCGCTGC
TCATGCGCGTCCTGGAGCGCGTCACCGGCTCCGGCCAGGACGCCTCGTCGGGCGCGCTGCAGGACGCCGCCCTTT
CGCTGCTGCGCAACTACCTGCGGGCCATCCGCGAGTGGCTTCGCCTCATCAGCGGCATCCTCCGCCACCGGCGCT
CGTTCCTGAACGGCAACGCCGTCTGGTGGACCAGCAACTACATGAGTATGGCCCCCCTTGGCTTCCTTCCCATCG
CCTTCTCTCTTCCCGTCTTTCTTCTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail