Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5650
Gene name
LocationContig_2839:295..1406
Strand-
Gene length (bp)1111
Transcript length (bp)849
Coding sequence length (bp)849
Protein length (aa) 283

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 62 0.5

Transmembrane Domains

Domain # Start End Length
1 23 45 22
2 52 74 22
3 94 116 22
4 158 180 22
5 215 237 22
6 250 272 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5650
MASPSPSIYTLPPSPARWDRVGVLYISLAAAWTALVLAGMAFCWANRRDAALRLRGLPLSLGAVSLLHVYWILAQ
LTYPVGGTMPVVLAYDVQYFVMGIYFPLGIALFHASNCRFLHVARKQMQYARPLLPPPRPRGCDGADSSWLCRVR
NMHYSVKLMTLIGMGMVVQVLLTVTMWFLCKKYHPTYGLPGTEIRGTTLPEQMEDLGRGWEWWPSVLWQFIWTWV
VAPVLIWRAWGIRDTMGWRTQTIGCCISNLHATPMFLVASYVPAFAPINAYFAPSQW*
Coding >Hirsu2|5650
ATGGCATCGCCGTCGCCGTCCATCTACACGCTGCCCCCCAGCCCGGCCCGCTGGGACCGGGTCGGCGTGCTCTAC
ATCAGCCTGGCCGCCGCGTGGACGGCGCTCGTGCTGGCCGGCATGGCCTTCTGCTGGGCCAACCGGCGCGACGCG
GCGCTGAGGCTGCGCGGCCTGCCGCTGTCCCTCGGCGCCGTCTCGCTGCTGCACGTCTACTGGATCCTGGCCCAG
CTGACGTACCCGGTCGGCGGCACCATGCCCGTCGTGCTGGCCTACGACGTCCAGTACTTCGTCATGGGCATCTAC
TTCCCGCTCGGCATCGCCCTCTTCCACGCCTCCAACTGCCGCTTCCTCCACGTCGCCCGCAAGCAGATGCAGTAC
GCGCGCCCGCTTCTGCCGCCGCCGCGCCCTCGCGGCTGTGACGGCGCCGACTCGTCCTGGCTGTGCCGCGTCAGG
AACATGCACTATAGCGTCAAGCTGATGACGCTCATCGGCATGGGCATGGTCGTTCAGGTCCTTCTTACCGTCACC
ATGTGGTTCCTCTGCAAGAAGTACCACCCGACCTACGGGCTGCCCGGGACGGAGATCCGCGGCACGACGCTGCCG
GAGCAGATGGAGGACCTGGGCCGCGGGTGGGAGTGGTGGCCGTCGGTGCTGTGGCAGTTCATCTGGACCTGGGTC
GTCGCGCCCGTCCTGATCTGGAGGGCCTGGGGGATCCGCGATACCATGGGATGGCGCACGCAGACCATCGGCTGC
TGCATCTCCAACCTCCACGCGACGCCCATGTTCCTCGTTGCGTCCTACGTGCCCGCCTTCGCGCCCATCAACGCC
TACTTCGCCCCGAGCCAGTGGTGA
Transcript >Hirsu2|5650
ATGGCATCGCCGTCGCCGTCCATCTACACGCTGCCCCCCAGCCCGGCCCGCTGGGACCGGGTCGGCGTGCTCTAC
ATCAGCCTGGCCGCCGCGTGGACGGCGCTCGTGCTGGCCGGCATGGCCTTCTGCTGGGCCAACCGGCGCGACGCG
GCGCTGAGGCTGCGCGGCCTGCCGCTGTCCCTCGGCGCCGTCTCGCTGCTGCACGTCTACTGGATCCTGGCCCAG
CTGACGTACCCGGTCGGCGGCACCATGCCCGTCGTGCTGGCCTACGACGTCCAGTACTTCGTCATGGGCATCTAC
TTCCCGCTCGGCATCGCCCTCTTCCACGCCTCCAACTGCCGCTTCCTCCACGTCGCCCGCAAGCAGATGCAGTAC
GCGCGCCCGCTTCTGCCGCCGCCGCGCCCTCGCGGCTGTGACGGCGCCGACTCGTCCTGGCTGTGCCGCGTCAGG
AACATGCACTATAGCGTCAAGCTGATGACGCTCATCGGCATGGGCATGGTCGTTCAGGTCCTTCTTACCGTCACC
ATGTGGTTCCTCTGCAAGAAGTACCACCCGACCTACGGGCTGCCCGGGACGGAGATCCGCGGCACGACGCTGCCG
GAGCAGATGGAGGACCTGGGCCGCGGGTGGGAGTGGTGGCCGTCGGTGCTGTGGCAGTTCATCTGGACCTGGGTC
GTCGCGCCCGTCCTGATCTGGAGGGCCTGGGGGATCCGCGATACCATGGGATGGCGCACGCAGACCATCGGCTGC
TGCATCTCCAACCTCCACGCGACGCCCATGTTCCTCGTTGCGTCCTACGTGCCCGCCTTCGCGCCCATCAACGCC
TACTTCGCCCCGAGCCAGTGGTGA
Gene >Hirsu2|5650
ATGGCATCGCCGTCGCCGTCCATCTACACGCTGCCCCCCAGCCCGGCCCGCTGGGACCGGGTCGGCGTGCTCTAC
ATCAGCCTGGCCGCCGCGTGGACGGCGCTCGTGCTGGCCGGCATGGCCTTCTGCTGGGCCAACCGGCGCGACGCG
GCGCTGAGGCTGCGCGGCCTGCCGCTGTCCCTCGGCGCCGTCTCGCTGCTGCACGTCTACTGGATCCTGGCCCAG
CTGACGTACCCGGTCGGCGGCACCATGCCCGTCGTGCTGGCCTACGACGTCCAGTACTTCGTCATGGGCATCTAC
TTCCCGCTCGGCATCGCCCTCTTCCACGCCTCCAACTGCCGCTTCCTCCACGTCGCCCGCAAGCAGATGCAGTAC
GCGCGCCCGCTTCTGCCGCCGCCGCGCCCTCGCGGCTGTGACGGCGCCGACTCGTCCTGGCTGTGCCGCGTCAGG
AACATGCACTATAGCGTCAAGCTGATGACGCTCATCGGCATGGGCATGGTCGTTCAGGTCCGTCTCTTTTTGCCT
CGTCGATCTTGCCCCCGTTCTCCCCTCGTCCCCCCCCCCCTTTTCTCGCCGTTTGAGGATGGGACATGTTGCTGA
TCCCTCTGGCGCTCCCGTACGAACGGACAAACGAAAAAAAACAGGTCCTTCTTACCGTCACCATGTGGTTCCTCT
GCAAGAAGTACCACCCGACCTACGGGCTGCCCGGGACGGAGATCCGCGGCACGACGCTGCCGGAGCAGATGGAGG
ACCTGGGCCGCGGGTGGGAGTGGTGGCCGTCGGTGCTGTGGCAGTTCATCTGGACCTGGGTCGTGAGTCTCTCTC
GGCCGCCTTTGGCTCCCTCGGACGCTCACGCAAGCCGCAGGTCGCGCCCGTCCTGATCTGGAGGGCCTGGGGGAT
CCGCGATACCATGGGATGGCGCACGCAGACCATCGGCTGCTGCATCTCCAAGTCAGCATATCCCCCCCCCTGTCC
CTCTACCCCGGAGCCGACGAGACTGACGGAGCGGCGCGCCCTCACCAGCCTCCACGCGACGCCCATGTTCCTCGT
TGCGTCCTACGTGCCCGCCTTCGCGCCCATCAACGCCTACTTCGCCCCGAGCCAGTGGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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