© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5650 |
| Gene name | |
| Location | Contig_2839:295..1406 |
| Strand | - |
| Gene length (bp) | 1111 |
| Transcript length (bp) | 849 |
| Coding sequence length (bp) | 849 |
| Protein length (aa) | 283 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 62 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 23 | 45 | 22 |
| 2 | 52 | 74 | 22 |
| 3 | 94 | 116 | 22 |
| 4 | 158 | 180 | 22 |
| 5 | 215 | 237 | 22 |
| 6 | 250 | 272 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5650 MASPSPSIYTLPPSPARWDRVGVLYISLAAAWTALVLAGMAFCWANRRDAALRLRGLPLSLGAVSLLHVYWILAQ LTYPVGGTMPVVLAYDVQYFVMGIYFPLGIALFHASNCRFLHVARKQMQYARPLLPPPRPRGCDGADSSWLCRVR NMHYSVKLMTLIGMGMVVQVLLTVTMWFLCKKYHPTYGLPGTEIRGTTLPEQMEDLGRGWEWWPSVLWQFIWTWV VAPVLIWRAWGIRDTMGWRTQTIGCCISNLHATPMFLVASYVPAFAPINAYFAPSQW* |
| Coding | >Hirsu2|5650 ATGGCATCGCCGTCGCCGTCCATCTACACGCTGCCCCCCAGCCCGGCCCGCTGGGACCGGGTCGGCGTGCTCTAC ATCAGCCTGGCCGCCGCGTGGACGGCGCTCGTGCTGGCCGGCATGGCCTTCTGCTGGGCCAACCGGCGCGACGCG GCGCTGAGGCTGCGCGGCCTGCCGCTGTCCCTCGGCGCCGTCTCGCTGCTGCACGTCTACTGGATCCTGGCCCAG CTGACGTACCCGGTCGGCGGCACCATGCCCGTCGTGCTGGCCTACGACGTCCAGTACTTCGTCATGGGCATCTAC TTCCCGCTCGGCATCGCCCTCTTCCACGCCTCCAACTGCCGCTTCCTCCACGTCGCCCGCAAGCAGATGCAGTAC GCGCGCCCGCTTCTGCCGCCGCCGCGCCCTCGCGGCTGTGACGGCGCCGACTCGTCCTGGCTGTGCCGCGTCAGG AACATGCACTATAGCGTCAAGCTGATGACGCTCATCGGCATGGGCATGGTCGTTCAGGTCCTTCTTACCGTCACC ATGTGGTTCCTCTGCAAGAAGTACCACCCGACCTACGGGCTGCCCGGGACGGAGATCCGCGGCACGACGCTGCCG GAGCAGATGGAGGACCTGGGCCGCGGGTGGGAGTGGTGGCCGTCGGTGCTGTGGCAGTTCATCTGGACCTGGGTC GTCGCGCCCGTCCTGATCTGGAGGGCCTGGGGGATCCGCGATACCATGGGATGGCGCACGCAGACCATCGGCTGC TGCATCTCCAACCTCCACGCGACGCCCATGTTCCTCGTTGCGTCCTACGTGCCCGCCTTCGCGCCCATCAACGCC TACTTCGCCCCGAGCCAGTGGTGA |
| Transcript | >Hirsu2|5650 ATGGCATCGCCGTCGCCGTCCATCTACACGCTGCCCCCCAGCCCGGCCCGCTGGGACCGGGTCGGCGTGCTCTAC ATCAGCCTGGCCGCCGCGTGGACGGCGCTCGTGCTGGCCGGCATGGCCTTCTGCTGGGCCAACCGGCGCGACGCG GCGCTGAGGCTGCGCGGCCTGCCGCTGTCCCTCGGCGCCGTCTCGCTGCTGCACGTCTACTGGATCCTGGCCCAG CTGACGTACCCGGTCGGCGGCACCATGCCCGTCGTGCTGGCCTACGACGTCCAGTACTTCGTCATGGGCATCTAC TTCCCGCTCGGCATCGCCCTCTTCCACGCCTCCAACTGCCGCTTCCTCCACGTCGCCCGCAAGCAGATGCAGTAC GCGCGCCCGCTTCTGCCGCCGCCGCGCCCTCGCGGCTGTGACGGCGCCGACTCGTCCTGGCTGTGCCGCGTCAGG AACATGCACTATAGCGTCAAGCTGATGACGCTCATCGGCATGGGCATGGTCGTTCAGGTCCTTCTTACCGTCACC ATGTGGTTCCTCTGCAAGAAGTACCACCCGACCTACGGGCTGCCCGGGACGGAGATCCGCGGCACGACGCTGCCG GAGCAGATGGAGGACCTGGGCCGCGGGTGGGAGTGGTGGCCGTCGGTGCTGTGGCAGTTCATCTGGACCTGGGTC GTCGCGCCCGTCCTGATCTGGAGGGCCTGGGGGATCCGCGATACCATGGGATGGCGCACGCAGACCATCGGCTGC TGCATCTCCAACCTCCACGCGACGCCCATGTTCCTCGTTGCGTCCTACGTGCCCGCCTTCGCGCCCATCAACGCC TACTTCGCCCCGAGCCAGTGGTGA |
| Gene | >Hirsu2|5650 ATGGCATCGCCGTCGCCGTCCATCTACACGCTGCCCCCCAGCCCGGCCCGCTGGGACCGGGTCGGCGTGCTCTAC ATCAGCCTGGCCGCCGCGTGGACGGCGCTCGTGCTGGCCGGCATGGCCTTCTGCTGGGCCAACCGGCGCGACGCG GCGCTGAGGCTGCGCGGCCTGCCGCTGTCCCTCGGCGCCGTCTCGCTGCTGCACGTCTACTGGATCCTGGCCCAG CTGACGTACCCGGTCGGCGGCACCATGCCCGTCGTGCTGGCCTACGACGTCCAGTACTTCGTCATGGGCATCTAC TTCCCGCTCGGCATCGCCCTCTTCCACGCCTCCAACTGCCGCTTCCTCCACGTCGCCCGCAAGCAGATGCAGTAC GCGCGCCCGCTTCTGCCGCCGCCGCGCCCTCGCGGCTGTGACGGCGCCGACTCGTCCTGGCTGTGCCGCGTCAGG AACATGCACTATAGCGTCAAGCTGATGACGCTCATCGGCATGGGCATGGTCGTTCAGGTCCGTCTCTTTTTGCCT CGTCGATCTTGCCCCCGTTCTCCCCTCGTCCCCCCCCCCCTTTTCTCGCCGTTTGAGGATGGGACATGTTGCTGA TCCCTCTGGCGCTCCCGTACGAACGGACAAACGAAAAAAAACAGGTCCTTCTTACCGTCACCATGTGGTTCCTCT GCAAGAAGTACCACCCGACCTACGGGCTGCCCGGGACGGAGATCCGCGGCACGACGCTGCCGGAGCAGATGGAGG ACCTGGGCCGCGGGTGGGAGTGGTGGCCGTCGGTGCTGTGGCAGTTCATCTGGACCTGGGTCGTGAGTCTCTCTC GGCCGCCTTTGGCTCCCTCGGACGCTCACGCAAGCCGCAGGTCGCGCCCGTCCTGATCTGGAGGGCCTGGGGGAT CCGCGATACCATGGGATGGCGCACGCAGACCATCGGCTGCTGCATCTCCAAGTCAGCATATCCCCCCCCCTGTCC CTCTACCCCGGAGCCGACGAGACTGACGGAGCGGCGCGCCCTCACCAGCCTCCACGCGACGCCCATGTTCCTCGT TGCGTCCTACGTGCCCGCCTTCGCGCCCATCAACGCCTACTTCGCCCCGAGCCAGTGGTGA |