© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|565 |
| Gene name | |
| Location | Contig_111:27620..29708 |
| Strand | + |
| Gene length (bp) | 2088 |
| Transcript length (bp) | 1815 |
| Coding sequence length (bp) | 1815 |
| Protein length (aa) | 605 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00999 | Na_H_Exchanger | Sodium/hydrogen exchanger family | 9.2E-39 | 18 | 468 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99173|NAH1_ZYGRO | Na(+)/H(+) antiporter 1 OS=Zygosaccharomyces rouxii GN=SOD2 PE=3 SV=1 | 3 | 532 | 6.0E-83 |
| sp|O42701|NAH2_ZYGRO | Na(+)/H(+) antiporter 2 OS=Zygosaccharomyces rouxii GN=SOD22 PE=3 SV=1 | 3 | 532 | 5.0E-82 |
| sp|O14123|NAH2_SCHPO | Probable Na(+)/H(+) antiporter C3A11.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod22 PE=1 SV=1 | 3 | 467 | 9.0E-82 |
| sp|Q99271|NAH1_YEAST | Na(+)/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NHA1 PE=1 SV=1 | 3 | 472 | 5.0E-79 |
| sp|P36606|NAH_SCHPO | Na(+)/H(+) antiporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod2 PE=1 SV=1 | 3 | 486 | 2.0E-57 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006812 | cation transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0015299 | solute:proton antiporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| GO:0015298 | solute:cation antiporter activity | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0015297 | antiporter activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0009987 | cellular process | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006811 | ion transport | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 27 | 17 |
| 2 | 34 | 53 | 19 |
| 3 | 73 | 95 | 22 |
| 4 | 107 | 129 | 22 |
| 5 | 246 | 268 | 22 |
| 6 | 342 | 359 | 17 |
| 7 | 369 | 387 | 18 |
| 8 | 407 | 424 | 17 |
| 9 | 451 | 473 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|565 MPSLDVSELNIVLSVLGTFIILYGIISVKIKQKWYLGEALPAVVIGIILGPIAAKFLDSERWGSGERGQTPEITS GVARVMIGVQLVIAGYQLPAKYNLIRWKEMTMCLLPIMTIMWLCTTLCMLATVPKVTLLAALVIGSCVTCTDPIL SQAIAKGPFADKFVARPLREIISSEAGANDGFGFPFLFLAVYLIRHADVPGAGGTEEKRSVVAAAVDGAARLLSA RAEEEVGRLGGGVGVALRNWFLETWLYIVLLSVVYGAVVGYGADKAVKLALRRKWIDGESYVLFPTALGLFLVGT CGAIGTDDLLACFVAGNALNWDGEYLAETERRHDEVNSCVDVLLNFGGFMFIGTVMPWSEFNDPDGTGITYGRLV LLGFMVLLFRRIPAILLSYKLMPAVVRDWKEALFMGYFGPIGAGAVFYVEHTRHLFPEPGRGDAEETNLVRAMVP VVYWLVLFSIVVHGLSIPGLNLIYKYMGVKPIQEDSVEIRRLSTRAATPPNAVTGSRDTFIAYNRFSRPVFDPDG LPVSRARSESRDGRSRSRNRSGSRHDDDDAFASANHNHNGFPEDFKFPPAPPGPQYSAFPGLPADVEPFEKPRTI RYQS* |
| Coding | >Hirsu2|565 ATGCCGAGCCTCGATGTGTCTGAGCTCAACATTGTTCTCTCGGTGTTGGGCACCTTCATCATCCTGTATGGCATC ATCTCCGTCAAGATCAAGCAGAAATGGTATCTGGGCGAAGCCTTGCCCGCCGTCGTCATCGGCATCATCCTCGGC CCCATAGCCGCCAAGTTCCTCGACAGCGAGCGATGGGGGTCGGGCGAGAGGGGGCAGACGCCTGAGATTACGTCG GGCGTCGCGCGCGTCATGATCGGCGTCCAGCTCGTCATCGCCGGATACCAGCTGCCGGCCAAGTATAACCTGATC CGGTGGAAGGAGATGACGATGTGTCTGCTGCCGATCATGACCATCATGTGGCTGTGCACGACGCTGTGCATGCTG GCGACGGTGCCCAAGGTGACGCTGCTGGCGGCGCTGGTCATCGGCTCGTGCGTCACCTGCACGGATCCGATCCTG TCGCAGGCCATCGCCAAGGGGCCCTTCGCCGACAAGTTCGTGGCGCGGCCGCTGCGGGAGATCATCTCGTCCGAG GCCGGCGCCAACGACGGCTTCGGCTTCCCCTTCCTCTTCCTGGCCGTCTACCTGATCCGGCACGCCGACGTGCCC GGCGCCGGCGGGACCGAGGAAAAGCGGTCGGTGGTGGCGGCGGCCGTGGACGGCGCGGCCCGGCTGCTGTCGGCG CGGGCCGAGGAGGAGGTGGGCCGGCTCGGGGGCGGCGTCGGCGTCGCGCTGCGCAACTGGTTCCTCGAGACGTGG CTGTACATCGTGCTCCTGTCCGTCGTCTACGGCGCCGTCGTCGGCTACGGCGCCGACAAGGCCGTCAAGCTGGCG CTGCGCCGCAAGTGGATCGACGGCGAGTCGTACGTGCTCTTCCCGACGGCGCTCGGCCTCTTCCTCGTCGGCACC TGCGGCGCCATCGGCACCGACGACCTGCTGGCCTGCTTCGTCGCCGGCAACGCCCTCAACTGGGACGGCGAGTAC CTGGCCGAGACGGAGCGGCGGCACGACGAGGTCAACTCGTGCGTCGACGTCCTGCTCAACTTCGGCGGCTTCATG TTCATCGGCACCGTCATGCCCTGGTCCGAGTTCAACGACCCGGACGGCACCGGCATCACCTACGGCCGCCTCGTC CTGCTCGGCTTCATGGTCCTGCTCTTCCGCCGCATCCCGGCCATCCTGCTCTCCTACAAGCTGATGCCGGCCGTC GTCCGCGACTGGAAGGAGGCCCTGTTCATGGGCTACTTCGGCCCCATCGGCGCCGGCGCCGTCTTCTACGTCGAG CACACCCGCCACCTCTTCCCCGAGCCGGGCCGCGGCGACGCCGAGGAGACCAACCTGGTGCGCGCCATGGTCCCC GTCGTCTACTGGCTCGTCCTCTTCTCCATCGTCGTCCACGGCCTGTCCATCCCGGGCCTCAACCTCATCTACAAG TACATGGGCGTCAAGCCGATCCAGGAGGACTCGGTCGAGATCCGCCGCCTGTCCACCCGCGCCGCCACGCCGCCC AACGCCGTCACCGGCAGCCGCGACACCTTCATCGCCTACAACCGCTTCAGCCGGCCCGTCTTCGACCCGGACGGC CTGCCCGTCTCCCGCGCCCGCTCCGAGTCGCGCGACGGCCGCTCCCGCTCCCGGAACCGCTCCGGCTCGCGCCAC GACGACGACGACGCCTTCGCCTCCGCCAACCACAACCACAACGGCTTCCCCGAAGACTTCAAGTTCCCGCCCGCC CCCCCCGGGCCCCAGTACAGCGCCTTCCCGGGCCTGCCCGCCGACGTCGAGCCGTTCGAGAAGCCGAGGACGATC CGGTACCAGAGTTAG |
| Transcript | >Hirsu2|565 ATGCCGAGCCTCGATGTGTCTGAGCTCAACATTGTTCTCTCGGTGTTGGGCACCTTCATCATCCTGTATGGCATC ATCTCCGTCAAGATCAAGCAGAAATGGTATCTGGGCGAAGCCTTGCCCGCCGTCGTCATCGGCATCATCCTCGGC CCCATAGCCGCCAAGTTCCTCGACAGCGAGCGATGGGGGTCGGGCGAGAGGGGGCAGACGCCTGAGATTACGTCG GGCGTCGCGCGCGTCATGATCGGCGTCCAGCTCGTCATCGCCGGATACCAGCTGCCGGCCAAGTATAACCTGATC CGGTGGAAGGAGATGACGATGTGTCTGCTGCCGATCATGACCATCATGTGGCTGTGCACGACGCTGTGCATGCTG GCGACGGTGCCCAAGGTGACGCTGCTGGCGGCGCTGGTCATCGGCTCGTGCGTCACCTGCACGGATCCGATCCTG TCGCAGGCCATCGCCAAGGGGCCCTTCGCCGACAAGTTCGTGGCGCGGCCGCTGCGGGAGATCATCTCGTCCGAG GCCGGCGCCAACGACGGCTTCGGCTTCCCCTTCCTCTTCCTGGCCGTCTACCTGATCCGGCACGCCGACGTGCCC GGCGCCGGCGGGACCGAGGAAAAGCGGTCGGTGGTGGCGGCGGCCGTGGACGGCGCGGCCCGGCTGCTGTCGGCG CGGGCCGAGGAGGAGGTGGGCCGGCTCGGGGGCGGCGTCGGCGTCGCGCTGCGCAACTGGTTCCTCGAGACGTGG CTGTACATCGTGCTCCTGTCCGTCGTCTACGGCGCCGTCGTCGGCTACGGCGCCGACAAGGCCGTCAAGCTGGCG CTGCGCCGCAAGTGGATCGACGGCGAGTCGTACGTGCTCTTCCCGACGGCGCTCGGCCTCTTCCTCGTCGGCACC TGCGGCGCCATCGGCACCGACGACCTGCTGGCCTGCTTCGTCGCCGGCAACGCCCTCAACTGGGACGGCGAGTAC CTGGCCGAGACGGAGCGGCGGCACGACGAGGTCAACTCGTGCGTCGACGTCCTGCTCAACTTCGGCGGCTTCATG TTCATCGGCACCGTCATGCCCTGGTCCGAGTTCAACGACCCGGACGGCACCGGCATCACCTACGGCCGCCTCGTC CTGCTCGGCTTCATGGTCCTGCTCTTCCGCCGCATCCCGGCCATCCTGCTCTCCTACAAGCTGATGCCGGCCGTC GTCCGCGACTGGAAGGAGGCCCTGTTCATGGGCTACTTCGGCCCCATCGGCGCCGGCGCCGTCTTCTACGTCGAG CACACCCGCCACCTCTTCCCCGAGCCGGGCCGCGGCGACGCCGAGGAGACCAACCTGGTGCGCGCCATGGTCCCC GTCGTCTACTGGCTCGTCCTCTTCTCCATCGTCGTCCACGGCCTGTCCATCCCGGGCCTCAACCTCATCTACAAG TACATGGGCGTCAAGCCGATCCAGGAGGACTCGGTCGAGATCCGCCGCCTGTCCACCCGCGCCGCCACGCCGCCC AACGCCGTCACCGGCAGCCGCGACACCTTCATCGCCTACAACCGCTTCAGCCGGCCCGTCTTCGACCCGGACGGC CTGCCCGTCTCCCGCGCCCGCTCCGAGTCGCGCGACGGCCGCTCCCGCTCCCGGAACCGCTCCGGCTCGCGCCAC GACGACGACGACGCCTTCGCCTCCGCCAACCACAACCACAACGGCTTCCCCGAAGACTTCAAGTTCCCGCCCGCC CCCCCCGGGCCCCAGTACAGCGCCTTCCCGGGCCTGCCCGCCGACGTCGAGCCGTTCGAGAAGCCGAGGACGATC CGGTACCAGAGTTAG |
| Gene | >Hirsu2|565 ATGCCGAGCCTCGATGTGTCTGAGCTCAACATTGTTCTCTCGGTGTTGGGTGAGAAAAACCGGACCTGTGTCGTG TTGGCGGCCGAGCTGACCGGTTTGTGCTGCCCAGGCACCTTCATCATCCTGTATGGCATCATCTCCGTCAAGATC AAGCAGAAATGGTATCTGGGCGAAGCCTGTGAGTCTGCCGAGTCGGGAGCGGACAGCGGCCGAGTTGCGCGGATG GGTTTTGACTTATATATATATATGAACGGCAGTGCCCGCCGTCGTCATCGGCATCATCCTCGGCCCCATAGCCGC CAAGTTCCTCGACAGCGAGCGATGGGGGTCGGGCGAGAGGGGGCAGACGCCTGAGATTACGTCGGTAAGAGGCTT CTTCTTTTTCTTCTTCGTCTTCTTCATCTTCTTCTTCGCCTCCTTTCTTCCCACCCTCGGCCTCCTTCCGGTGCA GAGTCCAGGTTCGGCTGACAGGTTGTCGTCGTCGTTCGTCTGGGCCAGGGCGTCGCGCGCGTCATGATCGGCGTC CAGCTCGTCATCGCCGGATACCAGCTGCCGGCCAAGTATAACCTGATCCGGTGGAAGGAGATGACGATGTGTCTG CTGCCGATCATGACCATCATGTGGCTGTGCACGACGCTGTGCATGCTGGCGACGGTGCCCAAGGTGACGCTGCTG GCGGCGCTGGTCATCGGCTCGTGCGTCACCTGCACGGATCCGATCCTGTCGCAGGCCATCGCCAAGGGGCCCTTC GCCGACAAGTTCGTGGCGCGGCCGCTGCGGGAGATCATCTCGTCCGAGGCCGGCGCCAACGACGGCTTCGGCTTC CCCTTCCTCTTCCTGGCCGTCTACCTGATCCGGCACGCCGACGTGCCCGGCGCCGGCGGGACCGAGGAAAAGCGG TCGGTGGTGGCGGCGGCCGTGGACGGCGCGGCCCGGCTGCTGTCGGCGCGGGCCGAGGAGGAGGTGGGCCGGCTC GGGGGCGGCGTCGGCGTCGCGCTGCGCAACTGGTTCCTCGAGACGTGGCTGTACATCGTGCTCCTGTCCGTCGTC TACGGCGCCGTCGTCGGCTACGGCGCCGACAAGGCCGTCAAGCTGGCGCTGCGCCGCAAGTGGATCGACGGCGAG TCGTACGTGCTCTTCCCGACGGCGCTCGGCCTCTTCCTCGTCGGCACCTGCGGCGCCATCGGCACCGACGACCTG CTGGCCTGCTTCGTCGCCGGCAACGCCCTCAACTGGGACGGCGAGTACCTGGCCGAGACGGAGCGGCGGCACGAC GAGGTCAACTCGTGCGTCGACGTCCTGCTCAACTTCGGCGGCTTCATGTTCATCGGCACCGTCATGCCCTGGTCC GAGTTCAACGACCCGGACGGCACCGGCATCACCTACGGCCGCCTCGTCCTGCTCGGCTTCATGGTCCTGCTCTTC CGCCGCATCCCGGCCATCCTGCTCTCCTACAAGCTGATGCCGGCCGTCGTCCGCGACTGGAAGGAGGCCCTGTTC ATGGGCTACTTCGGCCCCATCGGCGCCGGCGCCGTCTTCTACGTCGAGCACACCCGCCACCTCTTCCCCGAGCCG GGCCGCGGCGACGCCGAGGAGACCAACCTGGTGCGCGCCATGGTCCCCGTCGTCTACTGGCTCGTCCTCTTCTCC ATCGTCGTCCACGGCCTGTCCATCCCGGGCCTCAACCTCATCTACAAGTACATGGGCGTCAAGCCGATCCAGGAG GACTCGGTCGAGATCCGCCGCCTGTCCACCCGCGCCGCCACGCCGCCCAACGCCGTCACCGGCAGCCGCGACACC TTCATCGCCTACAACCGCTTCAGCCGGCCCGTCTTCGACCCGGACGGCCTGCCCGTCTCCCGCGCCCGCTCCGAG TCGCGCGACGGCCGCTCCCGCTCCCGGAACCGCTCCGGCTCGCGCCACGACGACGACGACGCCTTCGCCTCCGCC AACCACAACCACAACGGCTTCCCCGAAGACTTCAAGTTCCCGCCCGCCCCCCCCGGGCCCCAGTACAGCGCCTTC CCGGGCCTGCCCGCCGACGTCGAGCCGTTCGAGAAGCCGAGGACGATCCGGTACCAGAGTTAG |