Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5648
Gene name
LocationContig_2838:133..379
Strand-
Gene length (bp)246
Transcript length (bp)246
Coding sequence length (bp)246
Protein length (aa) 82

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P38227|QDR3_YEAST Quinidine resistance protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QDR3 PE=1 SV=2 9 75 1.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 19 36 17
2 41 63 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5648
MLTEFVHTRSSAGVAVNNFVRNILSCVGTVVAAPWIDALGSGWVFTIVALFCMVAGFLGIWMLRRNAHRWRRAMD
EALKDM*
Coding >Hirsu2|5648
ATGCTCACCGAGTTCGTGCACACGCGCAGCTCGGCCGGCGTGGCCGTCAACAACTTCGTGCGCAACATCCTCAGC
TGCGTCGGCACCGTCGTCGCCGCGCCCTGGATCGACGCCCTGGGCTCCGGCTGGGTCTTTACCATCGTCGCCCTT
TTCTGCATGGTCGCCGGCTTCCTCGGCATCTGGATGCTGCGCCGCAACGCGCACCGCTGGCGCAGGGCCATGGAC
GAGGCGCTCAAGGACATGTAG
Transcript >Hirsu2|5648
ATGCTCACCGAGTTCGTGCACACGCGCAGCTCGGCCGGCGTGGCCGTCAACAACTTCGTGCGCAACATCCTCAGC
TGCGTCGGCACCGTCGTCGCCGCGCCCTGGATCGACGCCCTGGGCTCCGGCTGGGTCTTTACCATCGTCGCCCTT
TTCTGCATGGTCGCCGGCTTCCTCGGCATCTGGATGCTGCGCCGCAACGCGCACCGCTGGCGCAGGGCCATGGAC
GAGGCGCTCAAGGACATGTAG
Gene >Hirsu2|5648
ATGCTCACCGAGTTCGTGCACACGCGCAGCTCGGCCGGCGTGGCCGTCAACAACTTCGTGCGCAACATCCTCAGC
TGCGTCGGCACCGTCGTCGCCGCGCCCTGGATCGACGCCCTGGGCTCCGGCTGGGTCTTTACCATCGTCGCCCTT
TTCTGCATGGTCGCCGGCTTCCTCGGCATCTGGATGCTGCGCCGCAACGCGCACCGCTGGCGCAGGGCCATGGAC
GAGGCGCTCAAGGACATGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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