Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5646
Gene name
LocationContig_2836:70..845
Strand-
Gene length (bp)775
Transcript length (bp)564
Coding sequence length (bp)564
Protein length (aa) 188

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16546 SGTA_dimer Homodimerisation domain of SGTA 2.3E-25 4 68
PF07719 TPR_2 Tetratricopeptide repeat 5.3E-05 104 137

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q12118|SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGT2 PE=1 SV=1 1 176 3.0E-26
sp|O70593|SGTA_RAT Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1 4 176 1.0E-25
sp|Q8BJU0|SGTA_MOUSE Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus GN=Sgta PE=1 SV=2 4 176 2.0E-25
sp|O43765|SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens GN=SGTA PE=1 SV=1 4 176 4.0E-24
sp|Q32LM2|SGTA_BOVIN Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus GN=SGTA PE=2 SV=1 4 176 7.0E-24
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Swissprot ID Swissprot Description Start End E-value
sp|Q12118|SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGT2 PE=1 SV=1 1 176 3.0E-26
sp|O70593|SGTA_RAT Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1 4 176 1.0E-25
sp|Q8BJU0|SGTA_MOUSE Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus GN=Sgta PE=1 SV=2 4 176 2.0E-25
sp|O43765|SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens GN=SGTA PE=1 SV=1 4 176 4.0E-24
sp|Q32LM2|SGTA_BOVIN Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus GN=SGTA PE=2 SV=1 4 176 7.0E-24
sp|Q96EQ0|SGTB_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens GN=SGTB PE=1 SV=1 3 176 1.0E-22
sp|Q80W98|SGTB_RAT Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus norvegicus GN=Sgtb PE=1 SV=1 3 176 3.0E-21
sp|Q8VD33|SGTB_MOUSE Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus GN=Sgtb PE=1 SV=1 3 176 3.0E-21
sp|O13797|SGT2_SCHPO Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sgt2 PE=3 SV=1 4 181 8.0E-20
sp|P0CT30|SGT2_USTMA Small glutamine-rich tetratricopeptide repeat-containing protein 2 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UMAG_10205 PE=3 SV=1 3 175 8.0E-17
sp|Q9USI5|STI1_SCHPO Heat shock protein sti1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sti1 PE=3 SV=1 104 176 1.0E-11
sp|Q84XU2|PPP5_ARATH Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana GN=PAPP5 PE=1 SV=1 103 175 3.0E-11
sp|Q84K11|PPP5_SOLLC Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1 103 175 5.0E-11
sp|Q60676|PPP5_MOUSE Serine/threonine-protein phosphatase 5 OS=Mus musculus GN=Ppp5c PE=1 SV=3 96 175 2.0E-10
sp|P53041|PPP5_HUMAN Serine/threonine-protein phosphatase 5 OS=Homo sapiens GN=PPP5C PE=1 SV=1 96 175 3.0E-10
sp|P53042|PPP5_RAT Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus GN=Ppp5c PE=1 SV=1 96 175 6.0E-10
sp|Q9STH1|HSOP3_ARATH Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana GN=HOP3 PE=2 SV=1 104 176 2.0E-08
sp|Q9H6T3|RPAP3_HUMAN RNA polymerase II-associated protein 3 OS=Homo sapiens GN=RPAP3 PE=1 SV=2 102 176 2.0E-08
sp|P23231|TOM70_NEUCR Mitochondrial import receptor subunit tom70 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tom70 PE=2 SV=3 97 174 2.0E-08
sp|O14217|TOM70_SCHPO Probable mitochondrial import receptor subunit tom70 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tom70 PE=1 SV=1 98 174 3.0E-08
sp|O43049|PPT1_SCHPO Serine/threonine-protein phosphatase T OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppt1 PE=3 SV=2 102 183 3.0E-08
sp|Q54DA8|STIP1_DICDI Protein STIP1 homolog OS=Dictyostelium discoideum GN=sti1 PE=3 SV=1 99 181 3.0E-08
sp|Q9D706|RPAP3_MOUSE RNA polymerase II-associated protein 3 OS=Mus musculus GN=Rpap3 PE=1 SV=1 102 176 3.0E-08
sp|Q9LNB6|HSOP1_ARATH Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis thaliana GN=HOP1 PE=2 SV=1 104 176 5.0E-08
sp|Q5R8D8|DNJC7_PONAB DnaJ homolog subfamily C member 7 OS=Pongo abelii GN=DNAJC7 PE=2 SV=1 93 174 6.0E-08
sp|Q99615|DNJC7_HUMAN DnaJ homolog subfamily C member 7 OS=Homo sapiens GN=DNAJC7 PE=1 SV=2 93 174 7.0E-08
sp|Q68FQ7|RPAP3_RAT RNA polymerase II-associated protein 3 OS=Rattus norvegicus GN=Rpap3 PE=1 SV=1 102 176 8.0E-08
sp|Q43468|HSOP1_SOYBN Hsp70-Hsp90 organizing protein 1 OS=Glycine max GN=HOP1 PE=1 SV=2 104 176 9.0E-08
sp|Q5XEP2|HSOP2_ARATH Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis thaliana GN=HOP2 PE=1 SV=1 104 176 1.0E-07
sp|Q9QYI3|DNJC7_MOUSE DnaJ homolog subfamily C member 7 OS=Mus musculus GN=Dnajc7 PE=1 SV=2 93 174 1.0E-07
sp|Q28IV3|RPAP3_XENTR RNA polymerase II-associated protein 3 OS=Xenopus tropicalis GN=rpap3 PE=2 SV=1 48 184 2.0E-07
sp|Q95LY5|TTC12_MACFA Tetratricopeptide repeat protein 12 (Fragment) OS=Macaca fascicularis GN=TTC12 PE=2 SV=1 79 184 6.0E-07
sp|F4KCL7|OE64M_ARATH Outer envelope protein 64, mitochondrial OS=Arabidopsis thaliana GN=OM64 PE=1 SV=1 104 183 6.0E-07
sp|Q6NU95|RPAP3_XENLA RNA polymerase II-associated protein 3 OS=Xenopus laevis GN=rpap3 PE=2 SV=1 79 176 6.0E-07
sp|Q28IV3|RPAP3_XENTR RNA polymerase II-associated protein 3 OS=Xenopus tropicalis GN=rpap3 PE=2 SV=1 99 183 7.0E-07
sp|Q5ZKQ3|RPAP3_CHICK RNA polymerase II-associated protein 3 OS=Gallus gallus GN=RPAP3 PE=2 SV=1 101 176 8.0E-07
sp|Q9H892|TTC12_HUMAN Tetratricopeptide repeat protein 12 OS=Homo sapiens GN=TTC12 PE=1 SV=2 79 184 9.0E-07
sp|Q6NU95|RPAP3_XENLA RNA polymerase II-associated protein 3 OS=Xenopus laevis GN=rpap3 PE=2 SV=1 99 184 1.0E-06
sp|Q9H6T3|RPAP3_HUMAN RNA polymerase II-associated protein 3 OS=Homo sapiens GN=RPAP3 PE=1 SV=2 99 183 6.0E-06
sp|P15705|STI1_YEAST Heat shock protein STI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STI1 PE=1 SV=1 104 175 6.0E-06
sp|Q9LVH5|OE64C_ARATH Outer envelope protein 64, chloroplastic OS=Arabidopsis thaliana GN=OEP64 PE=1 SV=1 81 183 6.0E-06
sp|Q68FQ7|RPAP3_RAT RNA polymerase II-associated protein 3 OS=Rattus norvegicus GN=Rpap3 PE=1 SV=1 87 183 7.0E-06
sp|Q32PZ3|UN45A_RAT Protein unc-45 homolog A OS=Rattus norvegicus GN=Unc45a PE=2 SV=1 90 181 7.0E-06
sp|Q9SRS9|CHIP_ARATH E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana GN=CHIP PE=1 SV=1 103 167 7.0E-06
sp|Q8BW49|TTC12_MOUSE Tetratricopeptide repeat protein 12 OS=Mus musculus GN=Ttc12 PE=1 SV=1 84 184 9.0E-06
sp|Q99KD5|UN45A_MOUSE Protein unc-45 homolog A OS=Mus musculus GN=Unc45a PE=1 SV=2 96 181 1.0E-05
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5674 0.3733 0.5886 0.0439 0.391 0.0648 0.4263 0.0812 0.3459 0.0308

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5406
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6140
Ophiocordyceps australis map64 (Brazil) OphauB2|3808
Ophiocordyceps camponoti-floridani Ophcf2|04689
Ophiocordyceps camponoti-rufipedis Ophun1|6426
Ophiocordyceps kimflemingae Ophio5|5322
Ophiocordyceps subramaniannii Hirsu2|5646 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5646
MHSSKQRLALAFCHFLTTSTTDGTLTADDKDSVDVAINCIAESFKVDPSDRKAVDAAVGSQSLLQIYSVYEKLKS
GGASSSSSASNPAAGRDAAEPSDEQKKQAEALKSKGNAAMANKDYGAAIDLYTQALNLHPANAIFLSNRAAAHSA
AKDHASARIDAEAAVAIDATYTKAWASSTRATAAPTP*
Coding >Hirsu2|5646
ATGCACTCGTCCAAGCAGCGGCTCGCGCTCGCCTTCTGCCACTTCCTGACGACGTCCACCACGGACGGCACGCTG
ACGGCCGACGACAAGGACTCGGTCGACGTGGCCATCAACTGCATCGCCGAGTCGTTCAAGGTGGACCCGTCGGAC
CGCAAGGCCGTCGACGCCGCCGTCGGCTCCCAGTCGCTGCTGCAGATCTACTCCGTCTACGAGAAGCTCAAGTCC
GGCGGCGCCTCATCGTCGTCGTCGGCCTCGAATCCCGCCGCCGGGCGTGATGCGGCCGAGCCGTCGGACGAGCAG
AAGAAGCAGGCCGAGGCGCTCAAGAGCAAGGGCAACGCCGCCATGGCCAACAAGGACTACGGCGCCGCCATCGAC
CTCTACACGCAGGCGCTGAACCTGCACCCCGCCAACGCCATCTTCCTCTCGAACCGGGCGGCGGCGCACTCGGCC
GCCAAGGACCACGCCTCGGCGCGCATCGATGCCGAGGCGGCCGTCGCCATCGACGCCACCTACACCAAGGCCTGG
GCATCGAGCACGAGGGCAACGGCGGCTCCGACGCCATGA
Transcript >Hirsu2|5646
ATGCACTCGTCCAAGCAGCGGCTCGCGCTCGCCTTCTGCCACTTCCTGACGACGTCCACCACGGACGGCACGCTG
ACGGCCGACGACAAGGACTCGGTCGACGTGGCCATCAACTGCATCGCCGAGTCGTTCAAGGTGGACCCGTCGGAC
CGCAAGGCCGTCGACGCCGCCGTCGGCTCCCAGTCGCTGCTGCAGATCTACTCCGTCTACGAGAAGCTCAAGTCC
GGCGGCGCCTCATCGTCGTCGTCGGCCTCGAATCCCGCCGCCGGGCGTGATGCGGCCGAGCCGTCGGACGAGCAG
AAGAAGCAGGCCGAGGCGCTCAAGAGCAAGGGCAACGCCGCCATGGCCAACAAGGACTACGGCGCCGCCATCGAC
CTCTACACGCAGGCGCTGAACCTGCACCCCGCCAACGCCATCTTCCTCTCGAACCGGGCGGCGGCGCACTCGGCC
GCCAAGGACCACGCCTCGGCGCGCATCGATGCCGAGGCGGCCGTCGCCATCGACGCCACCTACACCAAGGCCTGG
GCATCGAGCACGAGGGCAACGGCGGCTCCGACGCCATGA
Gene >Hirsu2|5646
ATGGTTCGTCCGCTCAAGCTCTCTTCTCCTCCCCCCAACCCCCCCTCCGGGTCCTCGTGCTGGACCTTGCATGTG
CCGCCTCGGCTGACGAATGTCGTTTTCATTTCCTGTGCGCCCCAGGCCTCCCCACAAGCGCCGCCGTCGCAGCAC
TCGTCCAAGCAGCGGCTCGCGCTCGCCTTCTGCCACTTCCTGACGACGTCCACCACGGACGGCACGCTGACGGCC
GACGACAAGGACTCGGTCGACGTGGCCATCAACTGCATCGCCGAGTCGTTCAAGGTGGACCCGTCGGACCGCAAG
GCCGTCGACGCCGCCGTCGGCTCCCAGTCGCTGCTGCAGATCTACTCCGTCTACGAGAAGCTCAAGTCCGGCGGC
GCCTCATCGTCGTCGTCGGCCTCGAATCCCGCCGCCGGGCGTGATGCGGCCGAGCCGTCGGACGAGCAGAAGAAG
CAGGCCGAGGCGCTCAAGAGCAAGGGCAACGCCGCCATGGCCAACAAGGACTACGGCGCCGCCATCGACCTCTAC
ACGCAGGCGCTGAACCTGCACCCCGCCAACGCCATCTTCCTCTCGAACCGGGCGGCGGCGCACTCGGCCGCCAAG
GACCACGCCTCGGCGCGCATCGATGCCGAGGCGGCCGTCGCCATCGACGCCACCTACACCAAGGCCTGGTCCCGG
CTCGGGCTGGCGCGCTTCGCCCTCGGCGACGCCAAGGGCGCCATGGACGCCTACGCCCAGGGCATCGAGCACGAG
GGCAACGGCGGCTCCGACGCCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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