Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5642
Gene name
LocationContig_2831:482..1618
Strand-
Gene length (bp)1136
Transcript length (bp)1080
Coding sequence length (bp)1080
Protein length (aa) 360

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04695 Pex14_N Peroxisomal membrane anchor protein (Pex14p) conserved region 1.3E-29 41 178

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5642
MTDGKAKPAPPDAIPAWQQPHQQQQGGFDDTATQLERSSPDQLQVAYRFLQNDEVRAGSREKKVQFLRSKGMSGH
DILSLLRETGVKEDGDVTHPGKADDDTEGTPALAYRNEGPRRDSVLTGRASHRPPIVTYPEFLTNPPKPPPLVTS
SGLLATFYGFAGFATLLFCASKYYVAPAVENLTSARSELYGAACQRLQALVCNLEKAVSEVPARSIQPVAVEDAS
DTEDPTELFHRDVGTQTLLPAGPVACLALPSAKFESEHQADRLSQANKSLSALLDQLRAQTEDLKDIRTLIDGFQ
EDLDGMTYSGHSRFTAAYDMYGQTGRRVEPEDEIRRVRDCIRSVKGILLSTRNFPASTR*
Coding >Hirsu2|5642
ATGACTGATGGGAAAGCAAAACCAGCACCGCCAGACGCTATTCCTGCGTGGCAGCAGCCGCACCAACAGCAGCAG
GGTGGTTTTGACGACACGGCCACCCAACTCGAGCGGTCCTCGCCTGATCAGCTCCAAGTAGCATACCGCTTTCTC
CAGAACGATGAAGTCAGGGCAGGCTCTCGGGAAAAGAAGGTTCAATTTCTGAGATCAAAGGGCATGTCGGGTCAC
GATATACTGAGTCTTTTAAGAGAGACCGGGGTCAAGGAGGATGGTGATGTTACGCATCCTGGTAAAGCCGATGAT
GACACAGAGGGTACTCCAGCTCTGGCGTACCGGAATGAAGGGCCACGTCGAGACTCTGTTCTGACTGGCAGGGCA
AGCCACCGACCTCCTATCGTTACCTATCCTGAATTTCTCACGAACCCTCCTAAGCCACCACCGCTCGTCACCTCC
AGCGGATTGCTTGCGACTTTCTACGGCTTTGCAGGCTTCGCCACGCTTCTTTTTTGCGCGAGCAAATACTATGTT
GCGCCTGCGGTCGAGAACCTGACCAGCGCTCGGTCCGAGCTGTATGGTGCTGCCTGCCAGAGGCTCCAAGCGCTC
GTTTGCAACCTCGAGAAAGCGGTGTCCGAAGTTCCCGCCCGCAGCATCCAGCCTGTCGCCGTGGAAGATGCCAGT
GACACGGAAGATCCGACCGAATTGTTCCATCGCGATGTCGGGACCCAGACGCTCTTGCCCGCCGGCCCTGTTGCC
TGCCTGGCCCTGCCCTCTGCCAAATTCGAATCGGAGCACCAAGCGGACAGGCTGTCCCAAGCGAACAAATCGCTG
TCTGCGCTCCTGGACCAGCTTCGTGCACAGACCGAGGATCTCAAGGACATACGCACGTTGATCGATGGGTTCCAG
GAAGACCTAGACGGCATGACGTACAGCGGTCATTCACGATTTACAGCCGCATACGACATGTATGGGCAGACAGGT
AGGAGAGTTGAGCCAGAGGACGAGATCCGCAGGGTGAGAGACTGCATCAGGAGTGTAAAAGGTATACTCCTCAGC
ACCCGGAACTTCCCCGCTTCAACAAGGTGA
Transcript >Hirsu2|5642
ATGACTGATGGGAAAGCAAAACCAGCACCGCCAGACGCTATTCCTGCGTGGCAGCAGCCGCACCAACAGCAGCAG
GGTGGTTTTGACGACACGGCCACCCAACTCGAGCGGTCCTCGCCTGATCAGCTCCAAGTAGCATACCGCTTTCTC
CAGAACGATGAAGTCAGGGCAGGCTCTCGGGAAAAGAAGGTTCAATTTCTGAGATCAAAGGGCATGTCGGGTCAC
GATATACTGAGTCTTTTAAGAGAGACCGGGGTCAAGGAGGATGGTGATGTTACGCATCCTGGTAAAGCCGATGAT
GACACAGAGGGTACTCCAGCTCTGGCGTACCGGAATGAAGGGCCACGTCGAGACTCTGTTCTGACTGGCAGGGCA
AGCCACCGACCTCCTATCGTTACCTATCCTGAATTTCTCACGAACCCTCCTAAGCCACCACCGCTCGTCACCTCC
AGCGGATTGCTTGCGACTTTCTACGGCTTTGCAGGCTTCGCCACGCTTCTTTTTTGCGCGAGCAAATACTATGTT
GCGCCTGCGGTCGAGAACCTGACCAGCGCTCGGTCCGAGCTGTATGGTGCTGCCTGCCAGAGGCTCCAAGCGCTC
GTTTGCAACCTCGAGAAAGCGGTGTCCGAAGTTCCCGCCCGCAGCATCCAGCCTGTCGCCGTGGAAGATGCCAGT
GACACGGAAGATCCGACCGAATTGTTCCATCGCGATGTCGGGACCCAGACGCTCTTGCCCGCCGGCCCTGTTGCC
TGCCTGGCCCTGCCCTCTGCCAAATTCGAATCGGAGCACCAAGCGGACAGGCTGTCCCAAGCGAACAAATCGCTG
TCTGCGCTCCTGGACCAGCTTCGTGCACAGACCGAGGATCTCAAGGACATACGCACGTTGATCGATGGGTTCCAG
GAAGACCTAGACGGCATGACGTACAGCGGTCATTCACGATTTACAGCCGCATACGACATGTATGGGCAGACAGGT
AGGAGAGTTGAGCCAGAGGACGAGATCCGCAGGGTGAGAGACTGCATCAGGAGTGTAAAAGGTATACTCCTCAGC
ACCCGGAACTTCCCCGCTTCAACAAGGTGA
Gene >Hirsu2|5642
ATGACTGATGGGAAAGCAAAACCAGCACCGCCAGACGCTATTCCTGCGTGGCAGCAGCCGCACCAACAGCAGCAG
GGTGGTTTTGACGACACGGCCACCCAACTCGAGCGGTCCTCGCCTGATCAGCTCCAAGTAGCATACCGCTTTCTC
CAGAACGATGAAGTCAGGGCAGGCTCTCGGGAAAAGAAGGTTCAATTTCTGAGATCAAAGGGCATGTCGGGTCAC
GATATACTGAGTCTTTTAAGAGAGACCGGGGTCAAGGAGGATGGTGATGTTGTTCGTCTCACTTTCCCTGTGGCC
CAGTTCGACAGACTGACGACGCGGTTTTCTAGACGCATCCTGGTAAAGCCGATGATGACACAGAGGGTACTCCAG
CTCTGGCGTACCGGAATGAAGGGCCACGTCGAGACTCTGTTCTGACTGGCAGGGCAAGCCACCGACCTCCTATCG
TTACCTATCCTGAATTTCTCACGAACCCTCCTAAGCCACCACCGCTCGTCACCTCCAGCGGATTGCTTGCGACTT
TCTACGGCTTTGCAGGCTTCGCCACGCTTCTTTTTTGCGCGAGCAAATACTATGTTGCGCCTGCGGTCGAGAACC
TGACCAGCGCTCGGTCCGAGCTGTATGGTGCTGCCTGCCAGAGGCTCCAAGCGCTCGTTTGCAACCTCGAGAAAG
CGGTGTCCGAAGTTCCCGCCCGCAGCATCCAGCCTGTCGCCGTGGAAGATGCCAGTGACACGGAAGATCCGACCG
AATTGTTCCATCGCGATGTCGGGACCCAGACGCTCTTGCCCGCCGGCCCTGTTGCCTGCCTGGCCCTGCCCTCTG
CCAAATTCGAATCGGAGCACCAAGCGGACAGGCTGTCCCAAGCGAACAAATCGCTGTCTGCGCTCCTGGACCAGC
TTCGTGCACAGACCGAGGATCTCAAGGACATACGCACGTTGATCGATGGGTTCCAGGAAGACCTAGACGGCATGA
CGTACAGCGGTCATTCACGATTTACAGCCGCATACGACATGTATGGGCAGACAGGTAGGAGAGTTGAGCCAGAGG
ACGAGATCCGCAGGGTGAGAGACTGCATCAGGAGTGTAAAAGGTATACTCCTCAGCACCCGGAACTTCCCCGCTT
CAACAAGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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