Protein ID | Hirsu2|5635 |
Gene name | |
Location | Contig_283:13316..14114 |
Strand | + |
Gene length (bp) | 798 |
Transcript length (bp) | 798 |
Coding sequence length (bp) | 798 |
Protein length (aa) | 266 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1339 | 0.0927 | 0.9288 | 0.1381 | 0.0389 | 0.0206 | 0.352 | 0.3193 | 0.1892 | 0.0051 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 25 | 0.999711 |
Orthofinder run ID | 4 |
Orthogroup | 185 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5635 MICCKSSILLYVLISLGWYIRGASPRESTGSTPLTMACKFKKVPRDGLNAVVFPINIAKANHSRGWFFAQAWSYG SIKNGAYVGLQPDLDGDDGHSRVRAVFSSFINGTKPTHKNCRNGADGGPGVTCNVNVEVSYSHTLRLNVSTSGGG KWTGKLVDFKTGRKWVVGEWILPSHFRGIGHMTTAFIEHWSSNTADYHECRQIPATEATFGFPYSPTNGERAEMW KPESHGNCGNYTKFIGKKTESGTEIRILGGSGSTTRRSVK* |
Coding | >Hirsu2|5635 ATGATTTGCTGCAAAAGCTCAATTCTCCTATATGTACTCATCAGCCTTGGGTGGTATATACGCGGTGCAAGCCCC CGTGAAAGTACGGGCTCAACGCCTCTGACTATGGCATGCAAGTTCAAGAAGGTCCCAAGAGATGGGCTGAATGCC GTCGTCTTCCCCATTAATATTGCCAAGGCCAACCACTCGAGGGGCTGGTTTTTTGCTCAAGCTTGGTCTTATGGC AGCATCAAGAATGGCGCGTATGTCGGTCTGCAACCTGACCTTGATGGGGATGATGGTCACTCGAGAGTACGCGCC GTCTTTTCCAGTTTTATCAACGGCACGAAGCCCACGCATAAAAACTGCAGAAACGGCGCCGATGGTGGTCCCGGT GTCACCTGCAACGTTAATGTGGAAGTGAGCTACAGTCACACCCTCAGGCTAAATGTGTCGACCTCGGGAGGCGGC AAGTGGACAGGCAAGTTAGTCGACTTTAAGACCGGTAGGAAGTGGGTGGTTGGTGAATGGATACTTCCTTCGCAT TTCCGAGGTATTGGTCACATGACTACTGCATTTATTGAGCATTGGTCCTCCAATACGGCAGACTATCACGAATGT CGACAGATTCCCGCCACAGAGGCAACATTTGGCTTCCCTTACTCTCCGACTAACGGCGAGAGAGCAGAGATGTGG AAACCTGAAAGCCACGGGAACTGTGGAAATTATACAAAATTCATTGGGAAGAAAACCGAATCCGGAACAGAGATT CGCATTTTAGGTGGTTCCGGCAGCACAACACGGAGAAGTGTGAAGTGA |
Transcript | >Hirsu2|5635 ATGATTTGCTGCAAAAGCTCAATTCTCCTATATGTACTCATCAGCCTTGGGTGGTATATACGCGGTGCAAGCCCC CGTGAAAGTACGGGCTCAACGCCTCTGACTATGGCATGCAAGTTCAAGAAGGTCCCAAGAGATGGGCTGAATGCC GTCGTCTTCCCCATTAATATTGCCAAGGCCAACCACTCGAGGGGCTGGTTTTTTGCTCAAGCTTGGTCTTATGGC AGCATCAAGAATGGCGCGTATGTCGGTCTGCAACCTGACCTTGATGGGGATGATGGTCACTCGAGAGTACGCGCC GTCTTTTCCAGTTTTATCAACGGCACGAAGCCCACGCATAAAAACTGCAGAAACGGCGCCGATGGTGGTCCCGGT GTCACCTGCAACGTTAATGTGGAAGTGAGCTACAGTCACACCCTCAGGCTAAATGTGTCGACCTCGGGAGGCGGC AAGTGGACAGGCAAGTTAGTCGACTTTAAGACCGGTAGGAAGTGGGTGGTTGGTGAATGGATACTTCCTTCGCAT TTCCGAGGTATTGGTCACATGACTACTGCATTTATTGAGCATTGGTCCTCCAATACGGCAGACTATCACGAATGT CGACAGATTCCCGCCACAGAGGCAACATTTGGCTTCCCTTACTCTCCGACTAACGGCGAGAGAGCAGAGATGTGG AAACCTGAAAGCCACGGGAACTGTGGAAATTATACAAAATTCATTGGGAAGAAAACCGAATCCGGAACAGAGATT CGCATTTTAGGTGGTTCCGGCAGCACAACACGGAGAAGTGTGAAGTGA |
Gene | >Hirsu2|5635 ATGATTTGCTGCAAAAGCTCAATTCTCCTATATGTACTCATCAGCCTTGGGTGGTATATACGCGGTGCAAGCCCC CGTGAAAGTACGGGCTCAACGCCTCTGACTATGGCATGCAAGTTCAAGAAGGTCCCAAGAGATGGGCTGAATGCC GTCGTCTTCCCCATTAATATTGCCAAGGCCAACCACTCGAGGGGCTGGTTTTTTGCTCAAGCTTGGTCTTATGGC AGCATCAAGAATGGCGCGTATGTCGGTCTGCAACCTGACCTTGATGGGGATGATGGTCACTCGAGAGTACGCGCC GTCTTTTCCAGTTTTATCAACGGCACGAAGCCCACGCATAAAAACTGCAGAAACGGCGCCGATGGTGGTCCCGGT GTCACCTGCAACGTTAATGTGGAAGTGAGCTACAGTCACACCCTCAGGCTAAATGTGTCGACCTCGGGAGGCGGC AAGTGGACAGGCAAGTTAGTCGACTTTAAGACCGGTAGGAAGTGGGTGGTTGGTGAATGGATACTTCCTTCGCAT TTCCGAGGTATTGGTCACATGACTACTGCATTTATTGAGCATTGGTCCTCCAATACGGCAGACTATCACGAATGT CGACAGATTCCCGCCACAGAGGCAACATTTGGCTTCCCTTACTCTCCGACTAACGGCGAGAGAGCAGAGATGTGG AAACCTGAAAGCCACGGGAACTGTGGAAATTATACAAAATTCATTGGGAAGAAAACCGAATCCGGAACAGAGATT CGCATTTTAGGTGGTTCCGGCAGCACAACACGGAGAAGTGTGAAGTGA |