© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5633 |
| Gene name | |
| Location | Contig_283:8553..8920 |
| Strand | - |
| Gene length (bp) | 367 |
| Transcript length (bp) | 306 |
| Coding sequence length (bp) | 306 |
| Protein length (aa) | 102 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide|Transmembrane domain | 0.118 | 0.1196 | 0.3253 | 0.1009 | 0.3431 | 0.0628 | 0.9296 | 0.1088 | 0.1907 | 0.006 |
| Orthofinder run ID | 4 |
| Orthogroup | 9920 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|5633 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5633 MWKALLLAALPLLAGYLHTKIHHKRFQQYAGFPQLPTSFILGNLKLLGEYIKHGPADRYPDMMLPEMHQDLARPP LILVDLQPINRPLVLIANHEIAEQVS* |
| Coding | >Hirsu2|5633 ATGTGGAAGGCTCTCCTCCTCGCCGCGCTGCCGCTGCTCGCCGGCTACCTGCACACCAAGATCCACCACAAGCGA TTCCAGCAATACGCCGGCTTCCCGCAGCTGCCCACCTCCTTTATTCTGGGCAATTTGAAGCTGCTGGGCGAATAC ATCAAGCATGGCCCGGCCGATCGCTACCCAGACATGATGCTCCCGGAAATGCACCAAGATCTGGCGCGGCCGCCG CTTATACTGGTCGACCTGCAGCCCATAAACCGCCCCTTGGTTCTCATCGCCAACCACGAGATCGCGGAGCAGGTC TCCTAA |
| Transcript | >Hirsu2|5633 ATGTGGAAGGCTCTCCTCCTCGCCGCGCTGCCGCTGCTCGCCGGCTACCTGCACACCAAGATCCACCACAAGCGA TTCCAGCAATACGCCGGCTTCCCGCAGCTGCCCACCTCCTTTATTCTGGGCAATTTGAAGCTGCTGGGCGAATAC ATCAAGCATGGCCCGGCCGATCGCTACCCAGACATGATGCTCCCGGAAATGCACCAAGATCTGGCGCGGCCGCCG CTTATACTGGTCGACCTGCAGCCCATAAACCGCCCCTTGGTTCTCATCGCCAACCACGAGATCGCGGAGCAGGTC TCCTAA |
| Gene | >Hirsu2|5633 ATGTGGAAGGCTCTCCTCCTCGCCGCGCTGCCGCTGCTCGCCGGCTACCTGCACACCAAGATCCACCACAAGCGA TTCCAGCAATACGCCGGCTTCCCGCAGCTGCCCACCTCCTTTATTCTGGGCAATTTGAAGCTGCTGGGCGAATAC ATCAAGCATGGCCCGGCCGATCGCTACCCAGGTGCGGACGGCGTTGGCGGCTGCGATATTCTGGCAGGCCAATAG CTGACCCCGCCACGCAGACATGATGCTCCCGGAAATGCACCAAGATCTGGCGCGGCCGCCGCTTATACTGGTCGA CCTGCAGCCCATAAACCGCCCCTTGGTTCTCATCGCCAACCACGAGATCGCGGAGCAGGTCTCCTAA |