© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|561 |
| Gene name | |
| Location | Contig_111:20263..21509 |
| Strand | + |
| Gene length (bp) | 1246 |
| Transcript length (bp) | 1005 |
| Coding sequence length (bp) | 1005 |
| Protein length (aa) | 335 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 66 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 32 | 54 | 22 |
| 2 | 67 | 89 | 22 |
| 3 | 101 | 123 | 22 |
| 4 | 143 | 165 | 22 |
| 5 | 185 | 207 | 22 |
| 6 | 228 | 250 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|561 MDVSEIDELIAAGSYEAQYRAQYIEIAQALKIAIASSVLITILVCAVVLGRLLSRAFIVKHFGADDALALSALII FIPFSAITIEYFVATAHPGTPESISLAIEYAVFPLYCTTLVLTRVSGLAFYYRICHLYQEFLVTIKVVFGILVAG YVVEALLLIFHCWPLTSLFHSRGYACFEDGCFTCFVTWFHASIAISTISFVSDLLLFSLPVAMLRALPHMPRKQK MQLACILLPGFAVVGISISLMPIIVRMHYFQNERQLDMNLYQEFIKTNVLLYLLQNLEISAMLIAISLPGLKPLV DKYCHEARSVARLVRRKERPEMVLESSEKAPSKL* |
| Coding | >Hirsu2|561 ATGGACGTGTCTGAAATCGACGAGCTGATTGCCGCTGGCAGCTATGAAGCCCAGTATCGCGCGCAGTATATCGAG ATCGCGCAGGCCTTGAAGATCGCCATCGCCAGCAGCGTCCTCATCACGATCCTGGTATGCGCCGTCGTCCTCGGC AGGCTGCTCTCGCGGGCCTTCATCGTCAAGCACTTTGGCGCCGACGACGCGTTGGCGCTCTCGGCTTTGATCATA TTCATCCCCTTCAGCGCCATCACCATCGAGTACTTCGTCGCCACCGCACACCCGGGCACGCCCGAGAGCATCAGC CTGGCCATCGAGTACGCCGTCTTCCCGCTCTACTGCACGACGCTCGTCCTCACTCGGGTCTCGGGCCTGGCGTTC TACTACCGCATCTGCCACCTGTACCAAGAGTTTCTCGTCACCATCAAGGTCGTGTTCGGCATCTTGGTCGCCGGC TACGTGGTCGAGGCCTTGCTGCTCATCTTCCACTGCTGGCCCCTGACCTCGCTCTTCCACTCCAGGGGCTACGCC TGCTTCGAAGACGGCTGCTTCACCTGCTTCGTGACCTGGTTCCATGCGTCCATTGCCATCTCTACCATTTCCTTC GTCAGCGACCTGCTGCTCTTCAGCCTGCCGGTGGCGATGCTGCGAGCTCTGCCGCACATGCCGCGGAAACAGAAG ATGCAGTTGGCTTGTATCCTTTTACCGGGTTTTGCCGTAGTCGGTATCTCGATCAGCCTGATGCCTATCATCGTC CGGATGCACTATTTCCAAAATGAGCGGCAGCTGGACATGAACCTCTACCAGGAGTTCATCAAAACGAACGTCTTG CTCTATCTCCTCCAGAACTTGGAGATCAGCGCGATGCTCATTGCCATATCGCTCCCAGGACTGAAACCGCTGGTG GATAAGTATTGCCACGAGGCAAGATCCGTGGCTAGATTGGTCCGGCGCAAGGAACGGCCTGAAATGGTGCTGGAA AGTAGCGAAAAGGCGCCTTCCAAGTTGTAA |
| Transcript | >Hirsu2|561 ATGGACGTGTCTGAAATCGACGAGCTGATTGCCGCTGGCAGCTATGAAGCCCAGTATCGCGCGCAGTATATCGAG ATCGCGCAGGCCTTGAAGATCGCCATCGCCAGCAGCGTCCTCATCACGATCCTGGTATGCGCCGTCGTCCTCGGC AGGCTGCTCTCGCGGGCCTTCATCGTCAAGCACTTTGGCGCCGACGACGCGTTGGCGCTCTCGGCTTTGATCATA TTCATCCCCTTCAGCGCCATCACCATCGAGTACTTCGTCGCCACCGCACACCCGGGCACGCCCGAGAGCATCAGC CTGGCCATCGAGTACGCCGTCTTCCCGCTCTACTGCACGACGCTCGTCCTCACTCGGGTCTCGGGCCTGGCGTTC TACTACCGCATCTGCCACCTGTACCAAGAGTTTCTCGTCACCATCAAGGTCGTGTTCGGCATCTTGGTCGCCGGC TACGTGGTCGAGGCCTTGCTGCTCATCTTCCACTGCTGGCCCCTGACCTCGCTCTTCCACTCCAGGGGCTACGCC TGCTTCGAAGACGGCTGCTTCACCTGCTTCGTGACCTGGTTCCATGCGTCCATTGCCATCTCTACCATTTCCTTC GTCAGCGACCTGCTGCTCTTCAGCCTGCCGGTGGCGATGCTGCGAGCTCTGCCGCACATGCCGCGGAAACAGAAG ATGCAGTTGGCTTGTATCCTTTTACCGGGTTTTGCCGTAGTCGGTATCTCGATCAGCCTGATGCCTATCATCGTC CGGATGCACTATTTCCAAAATGAGCGGCAGCTGGACATGAACCTCTACCAGGAGTTCATCAAAACGAACGTCTTG CTCTATCTCCTCCAGAACTTGGAGATCAGCGCGATGCTCATTGCCATATCGCTCCCAGGACTGAAACCGCTGGTG GATAAGTATTGCCACGAGGCAAGATCCGTGGCTAGATTGGTCCGGCGCAAGGAACGGCCTGAAATGGTGCTGGAA AGTAGCGAAAAGGCGCCTTCCAAGTTGTAA |
| Gene | >Hirsu2|561 ATGGACGTGTCTGAAATCGACGAGCTGATTGCCGCTGGCAGCTATGAAGCCCAGTATCGCGCGCAGTATATCGAG ATCGCGCAGGCCTTGAAGATCGCCATCGCCAGCAGCGTCCTCATCACGATCCTGGTATGCGCCGTCGTCCTCGGC AGGCTGCTCTCGCGGGCCTTCATCGTCAAGCACTTTGGCGCCGACGACGCGTTGGCGCTCTCGGCTTTGGTGAGC CACATGCCCTCGAGGCTCCAGCTGTCGACGCCGCGAATGGAGGCCAAGACGGAGCACTGACGCGGCCCGGCCCCA AGATCATATTCATCCCCTTCAGCGCCATCACCATCGAGTACTTCGTCGCCACCGCACACCCGGGCACGCCCGAGA GCATCAGCCTGGCCATCGAGTACGCCGTCTTCCCGCTCTACTGCACGACGCTCGTCCTCACTCGGGTCTCGGGCC TGGCGTTCTACTACCGCATCTGCCACCTGTACCAAGAGTTTCTCGTCACCATCAAGGTCGTGTTCGGCATCTTGG TCGCCGGCTACGTGGTCGAGGCCTTGCTGCTCATCTTCCACTGCTGGCCCCTGACCTCGCTCTTCCACTCCAGGG GCTACGCCTGCTTCGAAGACGGCTGCTTCACCTGCTTCGTGACCTGGTTCCATGCGTCCATTGCCATCTCTACCA TTTCCTTCGTCAGCGACCTGCTGCTCTTCAGCCTGCCGGTGGCGATGCTGCGAGCTCTGCCGCACATGCCGCGGA AACAGAAGATGCAGTTGGCTTGTATCCTTTTACCGGGTTTTGCGTGAGTGGTCACTTACACCGGCATTCCCCCTT TACCCTCGGAGGCGGCATCGGAATCGAGGGTTTCAGCTGATCGTGTATACAGCGTAGTCGGTATCTCGATCAGCC TGATGCCTATCATCGTCCGGATGCACTGTGAGTATACATCGTCAATACATGTGTGCTCATGGTCCGGAGACGATG TGATGCTAAGATTCTATGGCTCCAAGATTTCCAAAATGAGCGGCAGCTGGACATGAACCTCTACCAGGAGTTCAT CAAAACGAACGTCTTGCTCTATCTCCTCCAGAACTTGGAGATCAGCGCGATGCTCATTGCCATATCGCTCCCAGG ACTGAAACCGCTGGTGGATAAGTATTGCCACGAGGCAAGATCCGTGGCTAGATTGGTCCGGCGCAAGGAACGGCC TGAAATGGTGCTGGAAAGTAGCGAAAAGGCGCCTTCCAAGTTGTAA |