Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|561
Gene name
LocationContig_111:20263..21509
Strand+
Gene length (bp)1246
Transcript length (bp)1005
Coding sequence length (bp)1005
Protein length (aa) 335

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 66 0.5

Transmembrane Domains

Domain # Start End Length
1 32 54 22
2 67 89 22
3 101 123 22
4 143 165 22
5 185 207 22
6 228 250 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|561
MDVSEIDELIAAGSYEAQYRAQYIEIAQALKIAIASSVLITILVCAVVLGRLLSRAFIVKHFGADDALALSALII
FIPFSAITIEYFVATAHPGTPESISLAIEYAVFPLYCTTLVLTRVSGLAFYYRICHLYQEFLVTIKVVFGILVAG
YVVEALLLIFHCWPLTSLFHSRGYACFEDGCFTCFVTWFHASIAISTISFVSDLLLFSLPVAMLRALPHMPRKQK
MQLACILLPGFAVVGISISLMPIIVRMHYFQNERQLDMNLYQEFIKTNVLLYLLQNLEISAMLIAISLPGLKPLV
DKYCHEARSVARLVRRKERPEMVLESSEKAPSKL*
Coding >Hirsu2|561
ATGGACGTGTCTGAAATCGACGAGCTGATTGCCGCTGGCAGCTATGAAGCCCAGTATCGCGCGCAGTATATCGAG
ATCGCGCAGGCCTTGAAGATCGCCATCGCCAGCAGCGTCCTCATCACGATCCTGGTATGCGCCGTCGTCCTCGGC
AGGCTGCTCTCGCGGGCCTTCATCGTCAAGCACTTTGGCGCCGACGACGCGTTGGCGCTCTCGGCTTTGATCATA
TTCATCCCCTTCAGCGCCATCACCATCGAGTACTTCGTCGCCACCGCACACCCGGGCACGCCCGAGAGCATCAGC
CTGGCCATCGAGTACGCCGTCTTCCCGCTCTACTGCACGACGCTCGTCCTCACTCGGGTCTCGGGCCTGGCGTTC
TACTACCGCATCTGCCACCTGTACCAAGAGTTTCTCGTCACCATCAAGGTCGTGTTCGGCATCTTGGTCGCCGGC
TACGTGGTCGAGGCCTTGCTGCTCATCTTCCACTGCTGGCCCCTGACCTCGCTCTTCCACTCCAGGGGCTACGCC
TGCTTCGAAGACGGCTGCTTCACCTGCTTCGTGACCTGGTTCCATGCGTCCATTGCCATCTCTACCATTTCCTTC
GTCAGCGACCTGCTGCTCTTCAGCCTGCCGGTGGCGATGCTGCGAGCTCTGCCGCACATGCCGCGGAAACAGAAG
ATGCAGTTGGCTTGTATCCTTTTACCGGGTTTTGCCGTAGTCGGTATCTCGATCAGCCTGATGCCTATCATCGTC
CGGATGCACTATTTCCAAAATGAGCGGCAGCTGGACATGAACCTCTACCAGGAGTTCATCAAAACGAACGTCTTG
CTCTATCTCCTCCAGAACTTGGAGATCAGCGCGATGCTCATTGCCATATCGCTCCCAGGACTGAAACCGCTGGTG
GATAAGTATTGCCACGAGGCAAGATCCGTGGCTAGATTGGTCCGGCGCAAGGAACGGCCTGAAATGGTGCTGGAA
AGTAGCGAAAAGGCGCCTTCCAAGTTGTAA
Transcript >Hirsu2|561
ATGGACGTGTCTGAAATCGACGAGCTGATTGCCGCTGGCAGCTATGAAGCCCAGTATCGCGCGCAGTATATCGAG
ATCGCGCAGGCCTTGAAGATCGCCATCGCCAGCAGCGTCCTCATCACGATCCTGGTATGCGCCGTCGTCCTCGGC
AGGCTGCTCTCGCGGGCCTTCATCGTCAAGCACTTTGGCGCCGACGACGCGTTGGCGCTCTCGGCTTTGATCATA
TTCATCCCCTTCAGCGCCATCACCATCGAGTACTTCGTCGCCACCGCACACCCGGGCACGCCCGAGAGCATCAGC
CTGGCCATCGAGTACGCCGTCTTCCCGCTCTACTGCACGACGCTCGTCCTCACTCGGGTCTCGGGCCTGGCGTTC
TACTACCGCATCTGCCACCTGTACCAAGAGTTTCTCGTCACCATCAAGGTCGTGTTCGGCATCTTGGTCGCCGGC
TACGTGGTCGAGGCCTTGCTGCTCATCTTCCACTGCTGGCCCCTGACCTCGCTCTTCCACTCCAGGGGCTACGCC
TGCTTCGAAGACGGCTGCTTCACCTGCTTCGTGACCTGGTTCCATGCGTCCATTGCCATCTCTACCATTTCCTTC
GTCAGCGACCTGCTGCTCTTCAGCCTGCCGGTGGCGATGCTGCGAGCTCTGCCGCACATGCCGCGGAAACAGAAG
ATGCAGTTGGCTTGTATCCTTTTACCGGGTTTTGCCGTAGTCGGTATCTCGATCAGCCTGATGCCTATCATCGTC
CGGATGCACTATTTCCAAAATGAGCGGCAGCTGGACATGAACCTCTACCAGGAGTTCATCAAAACGAACGTCTTG
CTCTATCTCCTCCAGAACTTGGAGATCAGCGCGATGCTCATTGCCATATCGCTCCCAGGACTGAAACCGCTGGTG
GATAAGTATTGCCACGAGGCAAGATCCGTGGCTAGATTGGTCCGGCGCAAGGAACGGCCTGAAATGGTGCTGGAA
AGTAGCGAAAAGGCGCCTTCCAAGTTGTAA
Gene >Hirsu2|561
ATGGACGTGTCTGAAATCGACGAGCTGATTGCCGCTGGCAGCTATGAAGCCCAGTATCGCGCGCAGTATATCGAG
ATCGCGCAGGCCTTGAAGATCGCCATCGCCAGCAGCGTCCTCATCACGATCCTGGTATGCGCCGTCGTCCTCGGC
AGGCTGCTCTCGCGGGCCTTCATCGTCAAGCACTTTGGCGCCGACGACGCGTTGGCGCTCTCGGCTTTGGTGAGC
CACATGCCCTCGAGGCTCCAGCTGTCGACGCCGCGAATGGAGGCCAAGACGGAGCACTGACGCGGCCCGGCCCCA
AGATCATATTCATCCCCTTCAGCGCCATCACCATCGAGTACTTCGTCGCCACCGCACACCCGGGCACGCCCGAGA
GCATCAGCCTGGCCATCGAGTACGCCGTCTTCCCGCTCTACTGCACGACGCTCGTCCTCACTCGGGTCTCGGGCC
TGGCGTTCTACTACCGCATCTGCCACCTGTACCAAGAGTTTCTCGTCACCATCAAGGTCGTGTTCGGCATCTTGG
TCGCCGGCTACGTGGTCGAGGCCTTGCTGCTCATCTTCCACTGCTGGCCCCTGACCTCGCTCTTCCACTCCAGGG
GCTACGCCTGCTTCGAAGACGGCTGCTTCACCTGCTTCGTGACCTGGTTCCATGCGTCCATTGCCATCTCTACCA
TTTCCTTCGTCAGCGACCTGCTGCTCTTCAGCCTGCCGGTGGCGATGCTGCGAGCTCTGCCGCACATGCCGCGGA
AACAGAAGATGCAGTTGGCTTGTATCCTTTTACCGGGTTTTGCGTGAGTGGTCACTTACACCGGCATTCCCCCTT
TACCCTCGGAGGCGGCATCGGAATCGAGGGTTTCAGCTGATCGTGTATACAGCGTAGTCGGTATCTCGATCAGCC
TGATGCCTATCATCGTCCGGATGCACTGTGAGTATACATCGTCAATACATGTGTGCTCATGGTCCGGAGACGATG
TGATGCTAAGATTCTATGGCTCCAAGATTTCCAAAATGAGCGGCAGCTGGACATGAACCTCTACCAGGAGTTCAT
CAAAACGAACGTCTTGCTCTATCTCCTCCAGAACTTGGAGATCAGCGCGATGCTCATTGCCATATCGCTCCCAGG
ACTGAAACCGCTGGTGGATAAGTATTGCCACGAGGCAAGATCCGTGGCTAGATTGGTCCGGCGCAAGGAACGGCC
TGAAATGGTGCTGGAAAGTAGCGAAAAGGCGCCTTCCAAGTTGTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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