Protein ID | Hirsu2|5595 |
Gene name | |
Location | Contig_280:23130..24402 |
Strand | + |
Gene length (bp) | 1272 |
Transcript length (bp) | 1119 |
Coding sequence length (bp) | 1119 |
Protein length (aa) | 373 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 43 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 37 | 22 |
2 | 53 | 75 | 22 |
3 | 95 | 117 | 22 |
4 | 129 | 151 | 22 |
5 | 178 | 200 | 22 |
6 | 212 | 234 | 22 |
7 | 254 | 276 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5595 MDGQLPPPNYDNQGPGLVACAAVAMAASTVAVGLRFWSRAVAASSLIFWWDDWAMLLTLALSHAFLALNAYWTSI GLGRHAWMIPLDHLAPNAAANVAGLTLYGSCVCLVKLSALLLYARIFKRSSRAFVAALAAVAALVVVWWAVAAVV PWSFCRPWRKNVEPLVPGECHPQKAWFTASAFINAALDLLVLLLPMPAVWRLQMTARKRLSVMFIFLLGYSSAFL SFARFILIVRNPNMLAADGPTADPSWNLVPLLYLSMLEAPLAIFALCAPSINQLLARAIKYRSLASLFTTSPHPT PVGHADDARRRGRGGHKSASEKASSRKLWPLSDTSSTTAIADRSQGDSDEEQRIDIPKGVIQVSRDIRVARQ* |
Coding | >Hirsu2|5595 ATGGACGGCCAGCTCCCACCGCCCAACTACGACAACCAGGGCCCCGGGCTCGTGGCCTGCGCCGCCGTCGCCATG GCCGCCTCGACCGTCGCCGTCGGCCTGCGCTTCTGGTCGCGCGCTGTGGCCGCCTCGTCCCTGATCTTCTGGTGG GACGACTGGGCGATGCTGCTGACACTGGCCCTCTCGCACGCCTTCCTCGCTCTCAACGCCTACTGGACCTCGATC GGCCTTGGCCGCCACGCCTGGATGATACCGCTGGACCACCTCGCGCCCAACGCGGCCGCCAACGTGGCCGGCCTG ACCCTCTACGGCAGCTGCGTCTGCCTCGTCAAGCTGAGCGCGCTGCTGCTCTACGCCCGCATCTTCAAGCGCTCG TCGCGCGCCTTCGTCGCCGCCCTCGCCGCTGTCGCCGCCCTCGTTGTCGTCTGGTGGGCCGTCGCCGCCGTCGTG CCCTGGTCCTTCTGCCGCCCCTGGCGCAAGAACGTCGAGCCGCTGGTGCCCGGCGAGTGCCACCCGCAGAAGGCC TGGTTCACCGCCTCGGCCTTTATCAACGCCGCCCTCGACCTGCTCGTCCTGCTGCTGCCCATGCCGGCCGTCTGG CGCCTGCAGATGACGGCCCGCAAGAGGCTGTCCGTCATGTTCATCTTTCTGCTCGGCTACTCCTCGGCCTTTCTC TCCTTCGCCCGCTTCATCCTCATCGTTCGCAATCCCAATATGCTCGCCGCCGACGGCCCTACCGCCGACCCCTCC TGGAACCTCGTTCCGCTGCTCTACCTCTCCATGCTCGAGGCCCCCCTGGCCATCTTCGCCCTCTGCGCCCCGTCC ATCAACCAGCTCCTGGCCCGCGCCATCAAGTATCGCAGCCTCGCCTCCCTCTTCACCACCAGCCCTCACCCCACC CCCGTCGGCCACGCCGACGACGCCCGCCGCCGAGGCCGCGGCGGCCACAAGTCTGCCTCCGAGAAGGCCTCGTCC CGCAAGCTGTGGCCGCTGAGCGACACCTCGAGCACCACCGCCATCGCCGACCGCTCCCAAGGCGACAGCGACGAG GAGCAGAGGATCGACATCCCCAAGGGCGTCATCCAGGTGAGCCGCGATATCAGGGTCGCCCGCCAATAG |
Transcript | >Hirsu2|5595 ATGGACGGCCAGCTCCCACCGCCCAACTACGACAACCAGGGCCCCGGGCTCGTGGCCTGCGCCGCCGTCGCCATG GCCGCCTCGACCGTCGCCGTCGGCCTGCGCTTCTGGTCGCGCGCTGTGGCCGCCTCGTCCCTGATCTTCTGGTGG GACGACTGGGCGATGCTGCTGACACTGGCCCTCTCGCACGCCTTCCTCGCTCTCAACGCCTACTGGACCTCGATC GGCCTTGGCCGCCACGCCTGGATGATACCGCTGGACCACCTCGCGCCCAACGCGGCCGCCAACGTGGCCGGCCTG ACCCTCTACGGCAGCTGCGTCTGCCTCGTCAAGCTGAGCGCGCTGCTGCTCTACGCCCGCATCTTCAAGCGCTCG TCGCGCGCCTTCGTCGCCGCCCTCGCCGCTGTCGCCGCCCTCGTTGTCGTCTGGTGGGCCGTCGCCGCCGTCGTG CCCTGGTCCTTCTGCCGCCCCTGGCGCAAGAACGTCGAGCCGCTGGTGCCCGGCGAGTGCCACCCGCAGAAGGCC TGGTTCACCGCCTCGGCCTTTATCAACGCCGCCCTCGACCTGCTCGTCCTGCTGCTGCCCATGCCGGCCGTCTGG CGCCTGCAGATGACGGCCCGCAAGAGGCTGTCCGTCATGTTCATCTTTCTGCTCGGCTACTCCTCGGCCTTTCTC TCCTTCGCCCGCTTCATCCTCATCGTTCGCAATCCCAATATGCTCGCCGCCGACGGCCCTACCGCCGACCCCTCC TGGAACCTCGTTCCGCTGCTCTACCTCTCCATGCTCGAGGCCCCCCTGGCCATCTTCGCCCTCTGCGCCCCGTCC ATCAACCAGCTCCTGGCCCGCGCCATCAAGTATCGCAGCCTCGCCTCCCTCTTCACCACCAGCCCTCACCCCACC CCCGTCGGCCACGCCGACGACGCCCGCCGCCGAGGCCGCGGCGGCCACAAGTCTGCCTCCGAGAAGGCCTCGTCC CGCAAGCTGTGGCCGCTGAGCGACACCTCGAGCACCACCGCCATCGCCGACCGCTCCCAAGGCGACAGCGACGAG GAGCAGAGGATCGACATCCCCAAGGGCGTCATCCAGGTGAGCCGCGATATCAGGGTCGCCCGCCAATAG |
Gene | >Hirsu2|5595 ATGGACGGCCAGCTCCCACCGCCCAACTACGACAACCAGGGCCCCGGGCTCGTGGCCTGCGCCGCCGTCGCCATG GCCGCCTCGACCGTCGCCGTCGGCCTGCGCTTCTGGTCGCGCGCTGTGGCCGCCTCGTCCCTGATCTTCTGGTGG GACGACTGGGCGATGCTGCTGACACTGGCCCTCTCGCACGCCTTCCTCGCTCTCAACGCCTACTGGACCTCGATC GGCCTTGGCCGCCACGCCTGGATGATACCGCTGGACCACCTCGCGCCCAACGCGGCCGCCAACGTGGCCGGCCTG ACCCTCTACGGCAGCTGCGTCTGCCTCGTCAAGCTGAGCGCGCTGCTGCTCTACGCCCGCATCTTCAAGCGCTCG TCGCGCGCCTTCGTCGCCGCCCTCGCCGCTGTCGCCGCCCTCGTTGTCGTCTGGTGGGCCGTCGCCGCCGTCGTG CCCTGGTCCTTCTGCCGCCCCTGGCGCAAGAACGTCGAGCCGCTGGTGCCCGGCGAGTGCCACCCGCAGAAGGCC TGGTTCACCGCCTCGGCCTTTATCAACGCCGCCCTCGACCTGCTCGTCCTGCTGCTGCCCATGCCGGCCGTCTGG CGCCTGCAGATGACGGCCCGCAAGAGGCTGTCCGTCATGTTCATCTTTCTGCTCGGCTACTCGTCAGTTCCGCCC TGCCTCTTTCTCTCGCCTTCTCTCCCGCTCCCTTTCAAGCTGACGCCCCTGATCCCTGACAGCTCGGCCTTTCTC TCCTTCGCCCGCTTCATCCTCATCGTTCGCAATCCCAATATGCTCGCCGCCGACGGCCCTACCGCCGACCCCTCC TGTGCGTTTCCCCCCTTCACTTGGCGACAAGAGAGAGATGATGTCCTGCTCCATGTGCTGACAAGCCGTCCTTCG ACAGGGAACCTCGTTCCGCTGCTCTACCTCTCCATGCTCGAGGCCCCCCTGGCCATCTTCGCCCTCTGCGCCCCG TCCATCAACCAGCTCCTGGCCCGCGCCATCAAGTATCGCAGCCTCGCCTCCCTCTTCACCACCAGCCCTCACCCC ACCCCCGTCGGCCACGCCGACGACGCCCGCCGCCGAGGCCGCGGCGGCCACAAGTCTGCCTCCGAGAAGGCCTCG TCCCGCAAGCTGTGGCCGCTGAGCGACACCTCGAGCACCACCGCCATCGCCGACCGCTCCCAAGGCGACAGCGAC GAGGAGCAGAGGATCGACATCCCCAAGGGCGTCATCCAGGTGAGCCGCGATATCAGGGTCGCCCGCCAATAG |