Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5595
Gene name
LocationContig_280:23130..24402
Strand+
Gene length (bp)1272
Transcript length (bp)1119
Coding sequence length (bp)1119
Protein length (aa) 373

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 53 75 22
3 95 117 22
4 129 151 22
5 178 200 22
6 212 234 22
7 254 276 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5595
MDGQLPPPNYDNQGPGLVACAAVAMAASTVAVGLRFWSRAVAASSLIFWWDDWAMLLTLALSHAFLALNAYWTSI
GLGRHAWMIPLDHLAPNAAANVAGLTLYGSCVCLVKLSALLLYARIFKRSSRAFVAALAAVAALVVVWWAVAAVV
PWSFCRPWRKNVEPLVPGECHPQKAWFTASAFINAALDLLVLLLPMPAVWRLQMTARKRLSVMFIFLLGYSSAFL
SFARFILIVRNPNMLAADGPTADPSWNLVPLLYLSMLEAPLAIFALCAPSINQLLARAIKYRSLASLFTTSPHPT
PVGHADDARRRGRGGHKSASEKASSRKLWPLSDTSSTTAIADRSQGDSDEEQRIDIPKGVIQVSRDIRVARQ*
Coding >Hirsu2|5595
ATGGACGGCCAGCTCCCACCGCCCAACTACGACAACCAGGGCCCCGGGCTCGTGGCCTGCGCCGCCGTCGCCATG
GCCGCCTCGACCGTCGCCGTCGGCCTGCGCTTCTGGTCGCGCGCTGTGGCCGCCTCGTCCCTGATCTTCTGGTGG
GACGACTGGGCGATGCTGCTGACACTGGCCCTCTCGCACGCCTTCCTCGCTCTCAACGCCTACTGGACCTCGATC
GGCCTTGGCCGCCACGCCTGGATGATACCGCTGGACCACCTCGCGCCCAACGCGGCCGCCAACGTGGCCGGCCTG
ACCCTCTACGGCAGCTGCGTCTGCCTCGTCAAGCTGAGCGCGCTGCTGCTCTACGCCCGCATCTTCAAGCGCTCG
TCGCGCGCCTTCGTCGCCGCCCTCGCCGCTGTCGCCGCCCTCGTTGTCGTCTGGTGGGCCGTCGCCGCCGTCGTG
CCCTGGTCCTTCTGCCGCCCCTGGCGCAAGAACGTCGAGCCGCTGGTGCCCGGCGAGTGCCACCCGCAGAAGGCC
TGGTTCACCGCCTCGGCCTTTATCAACGCCGCCCTCGACCTGCTCGTCCTGCTGCTGCCCATGCCGGCCGTCTGG
CGCCTGCAGATGACGGCCCGCAAGAGGCTGTCCGTCATGTTCATCTTTCTGCTCGGCTACTCCTCGGCCTTTCTC
TCCTTCGCCCGCTTCATCCTCATCGTTCGCAATCCCAATATGCTCGCCGCCGACGGCCCTACCGCCGACCCCTCC
TGGAACCTCGTTCCGCTGCTCTACCTCTCCATGCTCGAGGCCCCCCTGGCCATCTTCGCCCTCTGCGCCCCGTCC
ATCAACCAGCTCCTGGCCCGCGCCATCAAGTATCGCAGCCTCGCCTCCCTCTTCACCACCAGCCCTCACCCCACC
CCCGTCGGCCACGCCGACGACGCCCGCCGCCGAGGCCGCGGCGGCCACAAGTCTGCCTCCGAGAAGGCCTCGTCC
CGCAAGCTGTGGCCGCTGAGCGACACCTCGAGCACCACCGCCATCGCCGACCGCTCCCAAGGCGACAGCGACGAG
GAGCAGAGGATCGACATCCCCAAGGGCGTCATCCAGGTGAGCCGCGATATCAGGGTCGCCCGCCAATAG
Transcript >Hirsu2|5595
ATGGACGGCCAGCTCCCACCGCCCAACTACGACAACCAGGGCCCCGGGCTCGTGGCCTGCGCCGCCGTCGCCATG
GCCGCCTCGACCGTCGCCGTCGGCCTGCGCTTCTGGTCGCGCGCTGTGGCCGCCTCGTCCCTGATCTTCTGGTGG
GACGACTGGGCGATGCTGCTGACACTGGCCCTCTCGCACGCCTTCCTCGCTCTCAACGCCTACTGGACCTCGATC
GGCCTTGGCCGCCACGCCTGGATGATACCGCTGGACCACCTCGCGCCCAACGCGGCCGCCAACGTGGCCGGCCTG
ACCCTCTACGGCAGCTGCGTCTGCCTCGTCAAGCTGAGCGCGCTGCTGCTCTACGCCCGCATCTTCAAGCGCTCG
TCGCGCGCCTTCGTCGCCGCCCTCGCCGCTGTCGCCGCCCTCGTTGTCGTCTGGTGGGCCGTCGCCGCCGTCGTG
CCCTGGTCCTTCTGCCGCCCCTGGCGCAAGAACGTCGAGCCGCTGGTGCCCGGCGAGTGCCACCCGCAGAAGGCC
TGGTTCACCGCCTCGGCCTTTATCAACGCCGCCCTCGACCTGCTCGTCCTGCTGCTGCCCATGCCGGCCGTCTGG
CGCCTGCAGATGACGGCCCGCAAGAGGCTGTCCGTCATGTTCATCTTTCTGCTCGGCTACTCCTCGGCCTTTCTC
TCCTTCGCCCGCTTCATCCTCATCGTTCGCAATCCCAATATGCTCGCCGCCGACGGCCCTACCGCCGACCCCTCC
TGGAACCTCGTTCCGCTGCTCTACCTCTCCATGCTCGAGGCCCCCCTGGCCATCTTCGCCCTCTGCGCCCCGTCC
ATCAACCAGCTCCTGGCCCGCGCCATCAAGTATCGCAGCCTCGCCTCCCTCTTCACCACCAGCCCTCACCCCACC
CCCGTCGGCCACGCCGACGACGCCCGCCGCCGAGGCCGCGGCGGCCACAAGTCTGCCTCCGAGAAGGCCTCGTCC
CGCAAGCTGTGGCCGCTGAGCGACACCTCGAGCACCACCGCCATCGCCGACCGCTCCCAAGGCGACAGCGACGAG
GAGCAGAGGATCGACATCCCCAAGGGCGTCATCCAGGTGAGCCGCGATATCAGGGTCGCCCGCCAATAG
Gene >Hirsu2|5595
ATGGACGGCCAGCTCCCACCGCCCAACTACGACAACCAGGGCCCCGGGCTCGTGGCCTGCGCCGCCGTCGCCATG
GCCGCCTCGACCGTCGCCGTCGGCCTGCGCTTCTGGTCGCGCGCTGTGGCCGCCTCGTCCCTGATCTTCTGGTGG
GACGACTGGGCGATGCTGCTGACACTGGCCCTCTCGCACGCCTTCCTCGCTCTCAACGCCTACTGGACCTCGATC
GGCCTTGGCCGCCACGCCTGGATGATACCGCTGGACCACCTCGCGCCCAACGCGGCCGCCAACGTGGCCGGCCTG
ACCCTCTACGGCAGCTGCGTCTGCCTCGTCAAGCTGAGCGCGCTGCTGCTCTACGCCCGCATCTTCAAGCGCTCG
TCGCGCGCCTTCGTCGCCGCCCTCGCCGCTGTCGCCGCCCTCGTTGTCGTCTGGTGGGCCGTCGCCGCCGTCGTG
CCCTGGTCCTTCTGCCGCCCCTGGCGCAAGAACGTCGAGCCGCTGGTGCCCGGCGAGTGCCACCCGCAGAAGGCC
TGGTTCACCGCCTCGGCCTTTATCAACGCCGCCCTCGACCTGCTCGTCCTGCTGCTGCCCATGCCGGCCGTCTGG
CGCCTGCAGATGACGGCCCGCAAGAGGCTGTCCGTCATGTTCATCTTTCTGCTCGGCTACTCGTCAGTTCCGCCC
TGCCTCTTTCTCTCGCCTTCTCTCCCGCTCCCTTTCAAGCTGACGCCCCTGATCCCTGACAGCTCGGCCTTTCTC
TCCTTCGCCCGCTTCATCCTCATCGTTCGCAATCCCAATATGCTCGCCGCCGACGGCCCTACCGCCGACCCCTCC
TGTGCGTTTCCCCCCTTCACTTGGCGACAAGAGAGAGATGATGTCCTGCTCCATGTGCTGACAAGCCGTCCTTCG
ACAGGGAACCTCGTTCCGCTGCTCTACCTCTCCATGCTCGAGGCCCCCCTGGCCATCTTCGCCCTCTGCGCCCCG
TCCATCAACCAGCTCCTGGCCCGCGCCATCAAGTATCGCAGCCTCGCCTCCCTCTTCACCACCAGCCCTCACCCC
ACCCCCGTCGGCCACGCCGACGACGCCCGCCGCCGAGGCCGCGGCGGCCACAAGTCTGCCTCCGAGAAGGCCTCG
TCCCGCAAGCTGTGGCCGCTGAGCGACACCTCGAGCACCACCGCCATCGCCGACCGCTCCCAAGGCGACAGCGAC
GAGGAGCAGAGGATCGACATCCCCAAGGGCGTCATCCAGGTGAGCCGCGATATCAGGGTCGCCCGCCAATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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