© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5591 |
| Gene name | |
| Location | Contig_280:8694..10570 |
| Strand | + |
| Gene length (bp) | 1876 |
| Transcript length (bp) | 1491 |
| Coding sequence length (bp) | 1491 |
| Protein length (aa) | 497 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 6.5E-23 | 68 | 200 |
| PF08031 | BBE | Berberine and berberine like | 1.8E-04 | 445 | 482 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 75 | 484 | 6.0E-21 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 48 | 481 | 1.0E-16 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 73 | 480 | 9.0E-12 |
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 57 | 247 | 1.0E-11 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 62 | 310 | 1.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 75 | 484 | 6.0E-21 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 48 | 481 | 1.0E-16 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 73 | 480 | 9.0E-12 |
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 57 | 247 | 1.0E-11 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 62 | 310 | 1.0E-11 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 75 | 230 | 9.0E-11 |
| sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 39 | 482 | 7.0E-10 |
| sp|P46377|FAS5_RHOFA | Uncharacterized oxidoreductase ORF5 in fasciation locus OS=Rhodococcus fascians GN=fas5 PE=2 SV=1 | 71 | 225 | 1.0E-07 |
| sp|Q6YW51|CKX6_ORYSJ | Cytokinin dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CKX6 PE=3 SV=1 | 65 | 239 | 4.0E-07 |
| sp|Q6YW50|CKX7_ORYSJ | Cytokinin dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CKX7 PE=3 SV=1 | 65 | 239 | 8.0E-07 |
| sp|Q9LY71|CKX6_ARATH | Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=2 | 49 | 231 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5591 MVSILSLVLGLACLCHVSLALSGEQVVQDLQRRLSPGSKVVLASDAAFAKDFTPRFSITTPPVFVVAAKPRLVTD VQQIVRYASRNHVPFLATGGGHGYSSTLGRLRHGILLDLGHFDAVEVDAAANTMTVGGAARSVNVSSAVQAAGKE IPVGQCICIGYAGATMGGGIGPYSGLYGTQSDSLLSAEMVTGTGDIVTVSEAEHPDLFYAVKGAGFNYGIATSLT YAVYPATNGGRAVNADMIFPGHLNGSVWRLAASFVGRQPKELSITLAVGYDPKLGGLFLIGNFIYAGPRAQGLDL IQPFLDLKPLNVSISTVEWKDVPAKAVYGHTLAGCTPGAHYVPFAANLYRVDVPSLVSLANYMDEAMSADPALRS TIIAWAQYAPHGFQRHADASSAFPHRDAVVFAQIDGFAEQAAQVPALARFGRDLRRRLQRASGRDALAVYAHFAH GDEAPEAWYSASRLARLRALKAVYDPENLFSYYNPVLGRSGCRAGA* |
| Coding | >Hirsu2|5591 ATGGTTTCCATCTTGTCTCTGGTTCTGGGACTCGCGTGTCTCTGCCACGTCTCGCTGGCTCTCTCCGGGGAGCAG GTCGTCCAGGATCTGCAGCGTCGCCTCTCGCCCGGGTCCAAAGTCGTCTTGGCCTCGGATGCAGCCTTTGCCAAG GACTTCACTCCGCGCTTCTCCATCACGACACCGCCCGTCTTTGTCGTTGCCGCAAAGCCTCGACTCGTCACCGAC GTTCAGCAGATTGTTCGATATGCGTCCCGCAATCATGTGCCGTTCCTGGCGACGGGCGGCGGCCATGGTTACTCG TCGACCCTGGGCCGGCTGCGGCACGGCATCCTCCTCGACCTGGGCCACTTTGACGCCGTCGAGGTCGATGCCGCC GCCAATACCATGACCGTCGGCGGTGCGGCACGGAGCGTCAACGTCTCCAGCGCTGTCCAGGCGGCTGGCAAGGAG ATTCCCGTGGGACAATGCATCTGCATCGGCTACGCCGGCGCCACCATGGGCGGCGGCATCGGCCCTTACTCCGGG CTCTACGGGACGCAGTCCGACTCGCTCCTCTCGGCGGAGATGGTGACGGGCACGGGCGACATCGTCACCGTCTCC GAGGCCGAGCACCCGGACCTCTTCTACGCCGTCAAGGGCGCCGGCTTCAACTACGGCATCGCCACCTCCCTGACC TACGCCGTCTACCCCGCCACCAACGGCGGCCGGGCCGTCAACGCCGACATGATCTTCCCGGGCCACCTCAATGGC TCCGTCTGGCGGCTGGCCGCGTCCTTCGTCGGCAGGCAGCCCAAGGAGCTCAGCATCACCCTGGCCGTCGGCTAC GACCCCAAGCTCGGCGGCCTCTTCCTCATCGGCAACTTCATCTACGCCGGGCCCCGGGCCCAGGGCCTCGACCTG ATACAGCCGTTCCTCGACCTCAAGCCCCTCAACGTCAGCATCTCGACCGTCGAGTGGAAAGACGTACCGGCCAAG GCCGTCTACGGCCACACCCTGGCCGGCTGCACGCCGGGGGCCCATTACGTGCCCTTCGCCGCCAACCTGTACAGG GTGGACGTGCCGAGCCTCGTCAGCCTCGCCAACTACATGGACGAGGCCATGTCCGCCGACCCGGCCCTGCGGTCG ACCATCATCGCCTGGGCCCAGTACGCGCCGCACGGCTTCCAGCGGCACGCGGATGCCTCTTCCGCCTTTCCCCAC CGCGATGCCGTCGTCTTTGCTCAGATCGACGGCTTCGCCGAGCAGGCGGCGCAGGTGCCCGCCCTGGCGCGCTTC GGCCGGGACCTGCGCCGCAGGCTGCAACGGGCCAGCGGCCGGGACGCGCTCGCCGTCTACGCCCACTTCGCCCAC GGCGACGAGGCGCCCGAGGCCTGGTACTCGGCTTCCCGCCTGGCGCGGCTGAGGGCCCTCAAGGCCGTCTACGAC CCGGAAAACCTCTTCTCCTACTACAACCCCGTCCTCGGGCGGTCGGGCTGCCGCGCGGGGGCTTGA |
| Transcript | >Hirsu2|5591 ATGGTTTCCATCTTGTCTCTGGTTCTGGGACTCGCGTGTCTCTGCCACGTCTCGCTGGCTCTCTCCGGGGAGCAG GTCGTCCAGGATCTGCAGCGTCGCCTCTCGCCCGGGTCCAAAGTCGTCTTGGCCTCGGATGCAGCCTTTGCCAAG GACTTCACTCCGCGCTTCTCCATCACGACACCGCCCGTCTTTGTCGTTGCCGCAAAGCCTCGACTCGTCACCGAC GTTCAGCAGATTGTTCGATATGCGTCCCGCAATCATGTGCCGTTCCTGGCGACGGGCGGCGGCCATGGTTACTCG TCGACCCTGGGCCGGCTGCGGCACGGCATCCTCCTCGACCTGGGCCACTTTGACGCCGTCGAGGTCGATGCCGCC GCCAATACCATGACCGTCGGCGGTGCGGCACGGAGCGTCAACGTCTCCAGCGCTGTCCAGGCGGCTGGCAAGGAG ATTCCCGTGGGACAATGCATCTGCATCGGCTACGCCGGCGCCACCATGGGCGGCGGCATCGGCCCTTACTCCGGG CTCTACGGGACGCAGTCCGACTCGCTCCTCTCGGCGGAGATGGTGACGGGCACGGGCGACATCGTCACCGTCTCC GAGGCCGAGCACCCGGACCTCTTCTACGCCGTCAAGGGCGCCGGCTTCAACTACGGCATCGCCACCTCCCTGACC TACGCCGTCTACCCCGCCACCAACGGCGGCCGGGCCGTCAACGCCGACATGATCTTCCCGGGCCACCTCAATGGC TCCGTCTGGCGGCTGGCCGCGTCCTTCGTCGGCAGGCAGCCCAAGGAGCTCAGCATCACCCTGGCCGTCGGCTAC GACCCCAAGCTCGGCGGCCTCTTCCTCATCGGCAACTTCATCTACGCCGGGCCCCGGGCCCAGGGCCTCGACCTG ATACAGCCGTTCCTCGACCTCAAGCCCCTCAACGTCAGCATCTCGACCGTCGAGTGGAAAGACGTACCGGCCAAG GCCGTCTACGGCCACACCCTGGCCGGCTGCACGCCGGGGGCCCATTACGTGCCCTTCGCCGCCAACCTGTACAGG GTGGACGTGCCGAGCCTCGTCAGCCTCGCCAACTACATGGACGAGGCCATGTCCGCCGACCCGGCCCTGCGGTCG ACCATCATCGCCTGGGCCCAGTACGCGCCGCACGGCTTCCAGCGGCACGCGGATGCCTCTTCCGCCTTTCCCCAC CGCGATGCCGTCGTCTTTGCTCAGATCGACGGCTTCGCCGAGCAGGCGGCGCAGGTGCCCGCCCTGGCGCGCTTC GGCCGGGACCTGCGCCGCAGGCTGCAACGGGCCAGCGGCCGGGACGCGCTCGCCGTCTACGCCCACTTCGCCCAC GGCGACGAGGCGCCCGAGGCCTGGTACTCGGCTTCCCGCCTGGCGCGGCTGAGGGCCCTCAAGGCCGTCTACGAC CCGGAAAACCTCTTCTCCTACTACAACCCCGTCCTCGGGCGGTCGGGCTGCCGCGCGGGGGCTTGA |
| Gene | >Hirsu2|5591 ATGGTTTCCATCTTGTCTCTGGTTCTGGGACTCGCGTGTCTCTGCCACGTCTCGCTGGCTCTCTCCGGGGAGCAG GTCGTCCAGGATCTGCAGCGTCGCCTCTCGCCCGGGTCCAAAGTCGTCTTGGCCTCGGATGCAGCCTTTGCCAAG GACTTCACTCCGCGCTTCTCCATCACGACACCGCCCGTCTTTGTCGTTGCCGCAAAGCCTCGACTCGTCACCGAC GTTCAGCAGATTGTAACTTGGCCCCCCTTGCCCTTTCACTCCCTCCCCTGCCAGCATGATGCCGCTTGGGACGGC CGTCGGAACAGGATCCCCTGGTTCTCCCTCCCGCCGTCCCTGGTTCCCCTATCACCTGCCGTCTCTCTCTCGGCC TCGGCCCAGCTGACGCGCCTCCAGGTTCGATATGCGTCCCGCAATCATGTGCCGTTCCTGGCGACGGGCGGCGGC CATGGTTACTCGTCGACCCTGGGCCGGCTGCGGCACGGCATCCTCCTCGACCTGGGCCACTTTGACGCCGTCGAG GTCGATGCCGCCGCCAATACCATGACCGTCGGCGGTGCGGCACGGAGCGTCAACGTCTCCAGCGCTGTCCAGGCG GCTGGCAAGGAGATTCGTAGGTCATCCGCCACAGTTTGCTTTTGGTTGCCCGCGGAGCCGTCGTAGCTAAGACCT CGGGCCCCTGCTCGTCGCGCACTTCAGCCGTGGGACAATGCATCTGCATCGGCTACGCCGGCGCCACCATGGGCG GCGGCATCGGCCCTTACTCCGGGCTCTACGGGACGCAGTCCGACTCGCTCCTCTCGGCGGAGATGGTGACGGGCA CGGGCGACATCGTCACCGTCTCCGAGGCCGAGCACCCGGACCTCTTCTACGCCGTCAAGGGCGCCGGCTTCAACT ACGGCATCGCCACCTCCCTGACCTACGCCGTCTACCCCGCCACCAACGGCGGCCGGGCCGTCAACGCCGACATGA TCTTCCCGGGCCACCTCAATGGCTCCGTCTGGCGGCTGGCCGCGTCCTTCGTCGGCAGGCAGCCCAAGGAGCTCA GCATCACCCTGGCCGTCGGCTACGACCCCAAGCTCGGCGGCCTCTTCCTCATCGGCAACTTCATCTACGCCGGGC CCCGGGCCCAGGGCCTCGACCTGATACAGCCGTTCCTCGACCTCAAGCCCCTCAACGTCAGCATCTCGACCGTCG AGTGGAAAGACGTACCGGCCAAGGCCGTCTACGGCCACACCCTGGCCGGCTGCACGCCGGGGGCCCATTACGTGC CCTTCGCCGCCAACCTGTACAGGGTGGACGTGCCGAGCCTCGTCAGCCTCGCCAACTACATGGACGAGGCCATGT CCGCCGACCCGGCCCTGCGGTCGACCATCATCGCCTGGGCCCAGTACGCGCCGCACGGCTTCCAGCGGCACGCGG ATGCCTCTTCCGCCTTTCCCCACCGCGATGCCGTCGTCTTTGCGTGAGTCGCCCTCTTTCTCCCTCCCTCCAACA GCACCCTGTCTTTTTTGATCCCACATCGCCACGTGTTCCGCCCCCCTCGGCGCAACCCGCCCCGTCCGCTCTCGG GCGCAGATGGCTGACAAGGGGCCCGCACAGTCAGATCGACGGCTTCGCCGAGCAGGCGGCGCAGGTGCCCGCCCT GGCGCGCTTCGGCCGGGACCTGCGCCGCAGGCTGCAACGGGCCAGCGGCCGGGACGCGCTCGCCGTCTACGCCCA CTTCGCCCACGGCGACGAGGCGCCCGAGGCCTGGTACTCGGCTTCCCGCCTGGCGCGGCTGAGGGCCCTCAAGGC CGTCTACGACCCGGAAAACCTCTTCTCCTACTACAACCCCGTCCTCGGGCGGTCGGGCTGCCGCGCGGGGGCTTG A |