Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5580
Gene name
LocationContig_28:34720..35026
Strand-
Gene length (bp)306
Transcript length (bp)306
Coding sequence length (bp)306
Protein length (aa) 102

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0735 0.066 0.9458 0.0323 0.0872 0.0022 0.0702 0.0446 0.0506 0.0058

SignalP

SignalP signal predicted Location Score
Yes 1 - 17 0.999684

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6181
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|248
Ophiocordyceps camponoti-rufipedis Ophun1|7177
Ophiocordyceps kimflemingae Ophio5|2492
Ophiocordyceps kimflemingae Ophio5|7929
Ophiocordyceps subramaniannii Hirsu2|5580 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5580
MLFTKFVALALATLVAAEPVETEDNVLQARDVEVDGNVFETRDVEVDGNVFEARGVEAEDNVLEARAPFLGILYS
RPHFRGASRQIRDWEGGRCINLHRPL*
Coding >Hirsu2|5580
ATGCTCTTCACCAAGTTCGTCGCTCTGGCTCTCGCCACTTTGGTGGCTGCTGAGCCTGTGGAGACCGAGGACAAC
GTGCTCCAGGCTCGAGATGTCGAGGTCGACGGCAACGTCTTCGAGACCCGAGATGTCGAGGTCGACGGCAACGTC
TTCGAAGCCCGAGGTGTGGAGGCCGAGGACAACGTGCTCGAAGCCCGCGCCCCGTTCTTGGGTATTCTCTACAGC
CGGCCGCACTTCCGTGGAGCCTCCCGGCAGATTCGTGACTGGGAAGGAGGACGATGCATCAACCTCCACCGCCCT
CTGTAA
Transcript >Hirsu2|5580
ATGCTCTTCACCAAGTTCGTCGCTCTGGCTCTCGCCACTTTGGTGGCTGCTGAGCCTGTGGAGACCGAGGACAAC
GTGCTCCAGGCTCGAGATGTCGAGGTCGACGGCAACGTCTTCGAGACCCGAGATGTCGAGGTCGACGGCAACGTC
TTCGAAGCCCGAGGTGTGGAGGCCGAGGACAACGTGCTCGAAGCCCGCGCCCCGTTCTTGGGTATTCTCTACAGC
CGGCCGCACTTCCGTGGAGCCTCCCGGCAGATTCGTGACTGGGAAGGAGGACGATGCATCAACCTCCACCGCCCT
CTGTAA
Gene >Hirsu2|5580
ATGCTCTTCACCAAGTTCGTCGCTCTGGCTCTCGCCACTTTGGTGGCTGCTGAGCCTGTGGAGACCGAGGACAAC
GTGCTCCAGGCTCGAGATGTCGAGGTCGACGGCAACGTCTTCGAGACCCGAGATGTCGAGGTCGACGGCAACGTC
TTCGAAGCCCGAGGTGTGGAGGCCGAGGACAACGTGCTCGAAGCCCGCGCCCCGTTCTTGGGTATTCTCTACAGC
CGGCCGCACTTCCGTGGAGCCTCCCGGCAGATTCGTGACTGGGAAGGAGGACGATGCATCAACCTCCACCGCCCT
CTGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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