© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5573 |
| Gene name | |
| Location | Contig_28:9391..10189 |
| Strand | - |
| Gene length (bp) | 798 |
| Transcript length (bp) | 798 |
| Coding sequence length (bp) | 798 |
| Protein length (aa) | 266 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.3063 | 0.138 | 0.8759 | 0.2835 | 0.2166 | 0.2354 | 0.1898 | 0.1984 | 0.1459 | 0.0104 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 24 | 0.999669 |
| Orthofinder run ID | 4 |
| Orthogroup | 6674 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5573 MAWLAGATTRAIAVALLLTAGVRANVYEGNMSRIIARLSAPSTGNKIIDNCRSRGLGVYCGSANRISDAMDTTAA PYSDPSAHCSDVLKMIAIAIGAGTTLHEGPVIKLSMRPPMNGSCPQIQGVTATPDTGKGWPSCRYTLPEASALEP GMLHWWSRMVLDRPLAYGQIRKGGLDLEAFKGCADLREVFVSGEVTEVALGEDGKAALTITGRRRGADNPDLNWC RISRGQMPYQGPGGGWECILRDLADDLAFETRWLQKDARR* |
| Coding | >Hirsu2|5573 ATGGCCTGGCTCGCCGGCGCAACAACTCGGGCGATAGCAGTAGCCCTGCTCCTCACTGCAGGAGTCAGAGCCAAC GTATACGAAGGCAACATGTCCCGCATCATTGCGAGATTGTCGGCGCCCAGTACTGGGAACAAAATTATCGACAAT TGCCGATCAAGGGGACTTGGGGTGTACTGCGGATCGGCTAACCGAATCTCGGACGCAATGGACACGACTGCAGCG CCTTATTCTGATCCGTCGGCCCACTGCAGTGACGTACTGAAGATGATTGCCATCGCAATAGGAGCCGGGACCACT CTGCATGAGGGACCGGTGATCAAGCTGTCAATGAGACCGCCAATGAACGGGAGCTGCCCACAGATCCAAGGCGTC ACCGCCACACCCGACACAGGCAAAGGCTGGCCCTCGTGTCGGTATACGCTGCCAGAGGCCAGTGCACTGGAGCCT GGGATGCTCCACTGGTGGTCCAGAATGGTGCTGGATCGGCCGTTGGCGTACGGCCAGATCCGCAAAGGTGGCCTC GATCTGGAAGCCTTCAAAGGCTGCGCCGACCTACGTGAGGTCTTTGTCTCCGGCGAAGTAACGGAGGTGGCCCTT GGCGAGGACGGCAAAGCAGCCTTGACTATCACCGGTCGCCGCCGGGGCGCTGATAATCCGGATCTCAACTGGTGT CGCATCAGCCGTGGCCAGATGCCATATCAAGGTCCTGGTGGGGGGTGGGAGTGTATTCTGCGCGACCTCGCCGAT GACCTGGCGTTCGAGACGAGGTGGCTCCAGAAAGATGCGAGACGTTGA |
| Transcript | >Hirsu2|5573 ATGGCCTGGCTCGCCGGCGCAACAACTCGGGCGATAGCAGTAGCCCTGCTCCTCACTGCAGGAGTCAGAGCCAAC GTATACGAAGGCAACATGTCCCGCATCATTGCGAGATTGTCGGCGCCCAGTACTGGGAACAAAATTATCGACAAT TGCCGATCAAGGGGACTTGGGGTGTACTGCGGATCGGCTAACCGAATCTCGGACGCAATGGACACGACTGCAGCG CCTTATTCTGATCCGTCGGCCCACTGCAGTGACGTACTGAAGATGATTGCCATCGCAATAGGAGCCGGGACCACT CTGCATGAGGGACCGGTGATCAAGCTGTCAATGAGACCGCCAATGAACGGGAGCTGCCCACAGATCCAAGGCGTC ACCGCCACACCCGACACAGGCAAAGGCTGGCCCTCGTGTCGGTATACGCTGCCAGAGGCCAGTGCACTGGAGCCT GGGATGCTCCACTGGTGGTCCAGAATGGTGCTGGATCGGCCGTTGGCGTACGGCCAGATCCGCAAAGGTGGCCTC GATCTGGAAGCCTTCAAAGGCTGCGCCGACCTACGTGAGGTCTTTGTCTCCGGCGAAGTAACGGAGGTGGCCCTT GGCGAGGACGGCAAAGCAGCCTTGACTATCACCGGTCGCCGCCGGGGCGCTGATAATCCGGATCTCAACTGGTGT CGCATCAGCCGTGGCCAGATGCCATATCAAGGTCCTGGTGGGGGGTGGGAGTGTATTCTGCGCGACCTCGCCGAT GACCTGGCGTTCGAGACGAGGTGGCTCCAGAAAGATGCGAGACGTTGA |
| Gene | >Hirsu2|5573 ATGGCCTGGCTCGCCGGCGCAACAACTCGGGCGATAGCAGTAGCCCTGCTCCTCACTGCAGGAGTCAGAGCCAAC GTATACGAAGGCAACATGTCCCGCATCATTGCGAGATTGTCGGCGCCCAGTACTGGGAACAAAATTATCGACAAT TGCCGATCAAGGGGACTTGGGGTGTACTGCGGATCGGCTAACCGAATCTCGGACGCAATGGACACGACTGCAGCG CCTTATTCTGATCCGTCGGCCCACTGCAGTGACGTACTGAAGATGATTGCCATCGCAATAGGAGCCGGGACCACT CTGCATGAGGGACCGGTGATCAAGCTGTCAATGAGACCGCCAATGAACGGGAGCTGCCCACAGATCCAAGGCGTC ACCGCCACACCCGACACAGGCAAAGGCTGGCCCTCGTGTCGGTATACGCTGCCAGAGGCCAGTGCACTGGAGCCT GGGATGCTCCACTGGTGGTCCAGAATGGTGCTGGATCGGCCGTTGGCGTACGGCCAGATCCGCAAAGGTGGCCTC GATCTGGAAGCCTTCAAAGGCTGCGCCGACCTACGTGAGGTCTTTGTCTCCGGCGAAGTAACGGAGGTGGCCCTT GGCGAGGACGGCAAAGCAGCCTTGACTATCACCGGTCGCCGCCGGGGCGCTGATAATCCGGATCTCAACTGGTGT CGCATCAGCCGTGGCCAGATGCCATATCAAGGTCCTGGTGGGGGGTGGGAGTGTATTCTGCGCGACCTCGCCGAT GACCTGGCGTTCGAGACGAGGTGGCTCCAGAAAGATGCGAGACGTTGA |