Protein ID | Hirsu2|5516 |
Gene name | |
Location | Contig_2763:726..1406 |
Strand | + |
Gene length (bp) | 680 |
Transcript length (bp) | 492 |
Coding sequence length (bp) | 492 |
Protein length (aa) | 164 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01694 | Rhomboid | Rhomboid family | 1.1E-06 | 24 | 102 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q4I4A4|RBD2_GIBZE | Rhomboid protein 2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RBD2 PE=3 SV=1 | 1 | 163 | 4.0E-76 |
sp|Q7S4V5|RBD2_NEUCR | Rhomboid protein 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rbd-2 PE=3 SV=1 | 1 | 163 | 5.0E-64 |
sp|Q874X5|RBD2_PODAS | Rhomboid protein 2 OS=Podospora anserina GN=RBD2 PE=3 SV=1 | 1 | 163 | 7.0E-63 |
sp|Q4WLP9|RBD2_ASPFU | Rhomboid protein 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rbd2 PE=3 SV=1 | 1 | 163 | 9.0E-59 |
sp|Q6CDV6|RBD2_YARLI | Rhomboid protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RBD2 PE=3 SV=1 | 25 | 162 | 2.0E-15 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q4I4A4|RBD2_GIBZE | Rhomboid protein 2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RBD2 PE=3 SV=1 | 1 | 163 | 4.0E-76 |
sp|Q7S4V5|RBD2_NEUCR | Rhomboid protein 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rbd-2 PE=3 SV=1 | 1 | 163 | 5.0E-64 |
sp|Q874X5|RBD2_PODAS | Rhomboid protein 2 OS=Podospora anserina GN=RBD2 PE=3 SV=1 | 1 | 163 | 7.0E-63 |
sp|Q4WLP9|RBD2_ASPFU | Rhomboid protein 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rbd2 PE=3 SV=1 | 1 | 163 | 9.0E-59 |
sp|Q6CDV6|RBD2_YARLI | Rhomboid protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RBD2 PE=3 SV=1 | 25 | 162 | 2.0E-15 |
sp|Q6BSA9|RBD2_DEBHA | Rhomboid protein 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RBD2 PE=3 SV=2 | 13 | 118 | 4.0E-13 |
sp|Q6CR06|RBD2_KLULA | Rhomboid protein 2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RBD2 PE=3 SV=1 | 6 | 162 | 7.0E-09 |
sp|Q5AH12|RBD2_CANAL | Rhomboid protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RBD2 PE=3 SV=1 | 8 | 162 | 3.0E-08 |
sp|Q12270|RBD2_YEAST | Rhomboid protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RBD2 PE=1 SV=1 | 12 | 124 | 1.0E-07 |
sp|Q6FSG0|RBD2_CANGA | Rhomboid protein 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RBD2 PE=3 SV=1 | 28 | 133 | 1.0E-06 |
sp|Q8LB17|RBL15_ARATH | Rhomboid-like protein 15 OS=Arabidopsis thaliana GN=RBL15 PE=1 SV=2 | 37 | 115 | 3.0E-06 |
sp|Q755H8|RBD2_ASHGO | Rhomboid protein 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RBD2 PE=3 SV=1 | 19 | 133 | 1.0E-05 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0004252 | serine-type endopeptidase activity | Yes |
GO:0140096 | catalytic activity, acting on a protein | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0008233 | peptidase activity | No |
GO:0017171 | serine hydrolase activity | No |
GO:0003824 | catalytic activity | No |
GO:0005575 | cellular_component | No |
GO:0008236 | serine-type peptidase activity | No |
GO:0004175 | endopeptidase activity | No |
GO:0016787 | hydrolase activity | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 55 | 77 | 22 |
3 | 81 | 103 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5516 LFFGPMTTLPAILYLAIEGGILRGNHSVMGASIWVFLLLGMEAIRTYKSNPHLVIGTYYIPTWTSPLLIIIVVAA LIPNTSLLGHLCGVVVGYIYGLGHLKFMAPPDSTLRWIENRLNLLAILPHYVSIDQKTYGRFGVLPSNNRTGTSA ATELVGGTRRLGP* |
Coding | >Hirsu2|5516 CTGTTCTTCGGACCTATGACAACGCTTCCCGCGATACTATATCTGGCTATCGAGGGCGGAATTCTCCGTGGTAAC CATTCTGTCATGGGAGCTAGTATCTGGGTCTTCCTTCTTCTAGGCATGGAAGCAATTCGAACTTACAAGTCGAAC CCCCACCTGGTCATAGGCACTTACTATATACCGACATGGACGTCGCCGCTCCTTATTATCATCGTCGTGGCCGCG CTTATACCAAATACGAGCCTACTCGGACACTTATGCGGCGTGGTTGTTGGATATATATATGGTTTAGGTCACCTG AAATTCATGGCACCCCCTGACTCGACTTTGCGTTGGATAGAGAACCGCCTGAACCTTTTGGCGATTTTACCGCAT TACGTGAGCATCGACCAAAAGACGTACGGTCGTTTTGGGGTGTTGCCCTCGAACAATCGCACGGGAACAAGTGCC GCAACAGAGCTTGTAGGGGGCACTCGCCGTCTCGGCCCTTGA |
Transcript | >Hirsu2|5516 CTGTTCTTCGGACCTATGACAACGCTTCCCGCGATACTATATCTGGCTATCGAGGGCGGAATTCTCCGTGGTAAC CATTCTGTCATGGGAGCTAGTATCTGGGTCTTCCTTCTTCTAGGCATGGAAGCAATTCGAACTTACAAGTCGAAC CCCCACCTGGTCATAGGCACTTACTATATACCGACATGGACGTCGCCGCTCCTTATTATCATCGTCGTGGCCGCG CTTATACCAAATACGAGCCTACTCGGACACTTATGCGGCGTGGTTGTTGGATATATATATGGTTTAGGTCACCTG AAATTCATGGCACCCCCTGACTCGACTTTGCGTTGGATAGAGAACCGCCTGAACCTTTTGGCGATTTTACCGCAT TACGTGAGCATCGACCAAAAGACGTACGGTCGTTTTGGGGTGTTGCCCTCGAACAATCGCACGGGAACAAGTGCC GCAACAGAGCTTGTAGGGGGCACTCGCCGTCTCGGCCCTTGA |
Gene | >Hirsu2|5516 CTGTTCTTCGGACGTGAGAATACACAATGCTTTGGGGGCCGGGTGAGAAGTCAGCTGACCAGCTTCCAGCTATGA CAACGCTTCCCGCGATACTATATCTGGCTATCGAGGGCGGAATTCTCCGTGGTAACCATTCTGTCATGGGAGCTA GGTGAGAGAGCGTCAATGGAGCGTTGATCGAGACAGCCAGGATGACTGATCTGTCTATTATCTCTAGTATCTGGG TCTTCCTTCTTCTAGGCATGGAAGCAATTCGAACTTACAAGTCGAACCCCCACCTGGTCATAGGCACTTACTATA TACCGACATGGACGTCGCCGCTCCTTATTATCATCGTCGTGGCCGCGCTTATACCAAATACGAGCCTACTCGGAC ACTTATGCGGCGTGGTTGTTGGATATATATGTGAGAGAGCACTGCTTTCATTCTATATTCTACTCGGGGCAATCA CTCATATATGCCGGCATAAAGATGGTTTAGGTCACCTGAAATTCATGGCACCCCCTGACTCGACTTTGCGTTGGA TAGAGAACCGCCTGAACCTTTTGGCGATTTTACCGCATTACGTGAGCATCGACCAAAAGACGTACGGTCGTTTTG GGGTGTTGCCCTCGAACAATCGCACGGGAACAAGTGCCGCAACAGAGCTTGTAGGGGGCACTCGCCGTCTCGGCC CTTGA |