Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5512
Gene name
LocationContig_2760:886..1504
Strand+
Gene length (bp)618
Transcript length (bp)549
Coding sequence length (bp)549
Protein length (aa) 183

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus 0.4428 0.4736 0.4143 0.1289 0.4597 0.045 0.121 0.113 0.1963 0.0524

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6180
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|02219
Ophiocordyceps camponoti-rufipedis Ophun1|6044
Ophiocordyceps kimflemingae Ophio5|3463
Ophiocordyceps subramaniannii Hirsu2|5512 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5512
MTERPRHAIVFGAAGLLGWSVLDQLLAAHPGPGSFSRVTAVVHRPASEADLCLPPPSPQRPALRIVAGIDLQQGT
AHDLARQLEDSVPDAGRITHVFYFVFSAFNDDHVRECEINCGMMQRVADAVDALAPELESFVYSGGTRVNPFSFP
TAESRGSGLTRGFYLLPRGTAYTCPAARSRLR*
Coding >Hirsu2|5512
ATGACGGAGCGCCCTCGCCACGCCATCGTCTTTGGCGCAGCCGGCCTCCTGGGATGGTCCGTCCTCGACCAGCTC
CTCGCGGCCCACCCCGGCCCCGGCTCCTTTTCCCGCGTCACGGCGGTGGTCCACCGGCCCGCGTCCGAGGCCGAC
CTCTGCCTCCCTCCGCCGTCCCCACAGCGGCCTGCGCTCCGGATCGTGGCCGGGATCGACCTGCAGCAGGGCACG
GCACATGATCTGGCGCGGCAGCTGGAGGACTCGGTGCCGGACGCGGGCCGGATCACGCACGTCTTCTATTTCGTC
TTCTCGGCCTTCAACGACGACCACGTCCGGGAGTGCGAGATCAACTGCGGCATGATGCAGAGGGTGGCCGATGCC
GTCGACGCGCTGGCCCCCGAGCTGGAGTCGTTCGTCTACTCCGGCGGCACAAGAGTGAACCCCTTTTCCTTCCCC
ACGGCCGAGAGTCGGGGCAGCGGGCTGACACGAGGCTTCTACTTGCTCCCCAGGGGTACGGCATATACGTGCCCG
GCGGCACGTTCGAGGCTCCGCTAG
Transcript >Hirsu2|5512
ATGACGGAGCGCCCTCGCCACGCCATCGTCTTTGGCGCAGCCGGCCTCCTGGGATGGTCCGTCCTCGACCAGCTC
CTCGCGGCCCACCCCGGCCCCGGCTCCTTTTCCCGCGTCACGGCGGTGGTCCACCGGCCCGCGTCCGAGGCCGAC
CTCTGCCTCCCTCCGCCGTCCCCACAGCGGCCTGCGCTCCGGATCGTGGCCGGGATCGACCTGCAGCAGGGCACG
GCACATGATCTGGCGCGGCAGCTGGAGGACTCGGTGCCGGACGCGGGCCGGATCACGCACGTCTTCTATTTCGTC
TTCTCGGCCTTCAACGACGACCACGTCCGGGAGTGCGAGATCAACTGCGGCATGATGCAGAGGGTGGCCGATGCC
GTCGACGCGCTGGCCCCCGAGCTGGAGTCGTTCGTCTACTCCGGCGGCACAAGAGTGAACCCCTTTTCCTTCCCC
ACGGCCGAGAGTCGGGGCAGCGGGCTGACACGAGGCTTCTACTTGCTCCCCAGGGGTACGGCATATACGTGCCCG
GCGGCACGTTCGAGGCTCCGCTAG
Gene >Hirsu2|5512
ATGACGGAGCGCCCTCGCCACGCCATCGTCTTTGGCGCAGCCGGCCTCCTGGGATGGTCCGTCCTCGACCAGCTC
CTCGCGGCCCACCCCGGCCCCGGCTCCTTTTCCCGCGTCACGGCGGTGGTCCACCGGCCCGCGTCCGAGGCCGAC
CTCTGCCTCCCTCCGCCGTCCCCACAGCGGCCTGCGCTCCGGATCGTGGCCGGGATCGACCTGCAGCAGGGCACG
GCACATGATCTGGCGCGGCAGCTGGAGGACTCGGTGCCGGACGCGGGCCGGATCACGCACGTCTTCTATTTCGGT
ACGCGGCCCGCGATTGTTGGGCCCTCGGCCGTGGCCGCGCCGCTAACGGATGGGGGGCAAAACGTAGTCTTCTCG
GCCTTCAACGACGACCACGTCCGGGAGTGCGAGATCAACTGCGGCATGATGCAGAGGGTGGCCGATGCCGTCGAC
GCGCTGGCCCCCGAGCTGGAGTCGTTCGTCTACTCCGGCGGCACAAGAGTGAACCCCTTTTCCTTCCCCACGGCC
GAGAGTCGGGGCAGCGGGCTGACACGAGGCTTCTACTTGCTCCCCAGGGGTACGGCATATACGTGCCCGGCGGCA
CGTTCGAGGCTCCGCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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