© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5507 |
| Gene name | |
| Location | Contig_276:7077..9159 |
| Strand | + |
| Gene length (bp) | 2082 |
| Transcript length (bp) | 2082 |
| Coding sequence length (bp) | 2082 |
| Protein length (aa) | 694 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07540 | NOC3p | Nucleolar complex-associated protein | 6.5E-31 | 127 | 217 |
| PF03914 | CBF | CBF/Mak21 family | 1.1E-24 | 497 | 682 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q07896|NOC3_YEAST | Nucleolar complex-associated protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOC3 PE=1 SV=1 | 7 | 693 | 6.0E-99 |
| sp|O94288|NOC3_SCHPO | Nucleolar complex-associated protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=noc3 PE=1 SV=1 | 43 | 691 | 2.0E-82 |
| sp|Q6DRN3|NOC3L_DANRE | Nucleolar complex protein 3 homolog OS=Danio rerio GN=noc3l PE=2 SV=1 | 35 | 692 | 4.0E-65 |
| sp|Q91Y26|NOC3L_CRIGR | Nucleolar complex protein 3 homolog OS=Cricetulus griseus GN=NOC3L PE=2 SV=1 | 126 | 686 | 6.0E-58 |
| sp|Q8VI84|NOC3L_MOUSE | Nucleolar complex protein 3 homolog OS=Mus musculus GN=Noc3l PE=2 SV=2 | 48 | 680 | 9.0E-58 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q07896|NOC3_YEAST | Nucleolar complex-associated protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOC3 PE=1 SV=1 | 7 | 693 | 6.0E-99 |
| sp|O94288|NOC3_SCHPO | Nucleolar complex-associated protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=noc3 PE=1 SV=1 | 43 | 691 | 2.0E-82 |
| sp|Q6DRN3|NOC3L_DANRE | Nucleolar complex protein 3 homolog OS=Danio rerio GN=noc3l PE=2 SV=1 | 35 | 692 | 4.0E-65 |
| sp|Q91Y26|NOC3L_CRIGR | Nucleolar complex protein 3 homolog OS=Cricetulus griseus GN=NOC3L PE=2 SV=1 | 126 | 686 | 6.0E-58 |
| sp|Q8VI84|NOC3L_MOUSE | Nucleolar complex protein 3 homolog OS=Mus musculus GN=Noc3l PE=2 SV=2 | 48 | 680 | 9.0E-58 |
| sp|Q5R952|NOC3L_PONAB | Nucleolar complex protein 3 homolog OS=Pongo abelii GN=NOC3L PE=2 SV=1 | 126 | 686 | 1.0E-57 |
| sp|Q8WTT2|NOC3L_HUMAN | Nucleolar complex protein 3 homolog OS=Homo sapiens GN=NOC3L PE=1 SV=1 | 126 | 680 | 5.0E-57 |
| sp|Q5XGZ8|NOC3L_XENLA | Nucleolar complex protein 3 homolog OS=Xenopus laevis GN=noc3l PE=2 SV=1 | 128 | 680 | 2.0E-49 |
| sp|Q9VI82|NOC3L_DROME | Nucleolar complex protein 3 homolog OS=Drosophila melanogaster GN=CG1234 PE=1 SV=1 | 122 | 680 | 2.0E-34 |
| sp|Q61LN7|NOC3L_CAEBR | Nucleolar complex protein 3 homolog OS=Caenorhabditis briggsae GN=CBG08826 PE=3 SV=1 | 90 | 665 | 2.0E-26 |
| sp|P91136|NOC3L_CAEEL | Nucleolar complex protein 3 homolog OS=Caenorhabditis elegans GN=C37H5.5 PE=3 SV=3 | 126 | 665 | 2.0E-25 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 36 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5507 MSSNGHKRRKVAHNSSDDEGQQRQRSKQTQKDFFKHASNWNLEQDYELRRRKSKKKAKESTKLPQIKTTDGRVEI LQSLQTEDDAGSVASDDDWLDGREDELEPEPDRAEEAEAEDERPEDQQVLEAKEELAKLATAVNEKPEANAGALK ALAKIGQSRVPAVQMLALLTQMAVYKDIIPGYRIRPLSEEAQKEKVSKEVRRMRQFEQALVHGYQGYVRELARCA KAAAPRPPPPPGGQSLASVAVSCACALVTAVPHFNFRSDLLQILVGRLSRRAGAANDEAAARCRGALETLFRDDD EGRPSFEAVSLLAKMMRARDFDVDERVLDLFLSLRLLSEFAGTASGDRVERRPDGGRPPETPRKKAKREFRTKRE RKALKEQKALDRDMAQADALVSHEERERMQSETLKLVFATYFRILKLRLPRLMGAVLEGLARYAHLINQDFFGDL LEALKDLIRHSDDDADAGPADDVGGGDDDDDGTRRHASCRNLTREALLCTVTAFALLAGQDAHNARRELHLDLSF FTVHLFRSLLSLSTDPDLENSGPSASSSSSSSSSSSSSSVNFQTTTVLLIRSLTGVLLPPWNIRQVPPLRLAAFT KQLMTAALQLPDRSAQAVLALVADVAATHSAKVASLWHTEERKGDGAFNALSETVEGSNPLASTVWEGELLRRHY SPKVREAVKMLEKSVSSR* |
| Coding | >Hirsu2|5507 ATGAGCTCCAATGGGCACAAGAGGCGAAAGGTAGCGCACAACTCGTCGGACGACGAGGGGCAGCAGCGGCAACGA TCCAAACAGACGCAAAAGGACTTCTTCAAGCACGCGTCCAACTGGAACCTGGAGCAGGACTACGAGCTGAGGCGG CGGAAGAGCAAGAAGAAGGCCAAGGAGAGCACCAAGCTGCCGCAGATCAAGACGACCGACGGCCGGGTCGAGATC CTGCAGAGCCTGCAGACCGAGGACGATGCCGGCTCGGTAGCCAGCGACGACGACTGGCTCGACGGCCGCGAGGAC GAGCTCGAGCCTGAGCCGGACCGGGCCGAGGAGGCCGAGGCCGAGGACGAGAGGCCCGAGGACCAGCAGGTGCTG GAGGCGAAGGAGGAGCTGGCCAAGCTGGCGACGGCCGTCAACGAGAAGCCCGAGGCGAACGCGGGCGCGCTCAAG GCGCTGGCCAAGATCGGCCAGTCGCGGGTCCCCGCCGTCCAGATGCTGGCGCTCCTGACGCAGATGGCCGTCTAT AAGGACATCATCCCCGGGTACCGGATCCGGCCGCTGTCCGAGGAGGCGCAGAAAGAGAAGGTCTCCAAGGAGGTG CGCCGGATGCGGCAGTTCGAGCAGGCGCTCGTCCACGGCTACCAAGGCTACGTCCGCGAGCTGGCGCGGTGCGCT AAGGCCGCCGCGCCCCGCCCGCCGCCGCCGCCCGGCGGACAGAGCCTGGCCAGCGTGGCCGTCAGCTGCGCTTGC GCCCTCGTCACGGCCGTGCCGCACTTCAACTTCCGCTCCGACCTGCTCCAGATCCTGGTCGGGCGGCTGAGCCGG CGCGCGGGGGCCGCCAACGACGAGGCGGCGGCCCGGTGCCGGGGCGCGCTCGAGACGCTGTTCCGCGACGACGAC GAGGGTCGGCCCTCGTTCGAGGCCGTCTCGCTCCTGGCCAAGATGATGCGCGCGCGCGACTTCGACGTCGACGAG CGCGTCCTCGACCTCTTCCTCAGCCTGCGCCTGCTGTCCGAGTTCGCCGGCACCGCGTCCGGCGACCGGGTCGAG CGCCGGCCGGACGGCGGCCGCCCCCCGGAGACGCCGAGGAAGAAGGCCAAACGCGAGTTCCGCACCAAGCGCGAG CGGAAGGCGCTCAAGGAGCAGAAGGCGCTGGACCGCGACATGGCCCAGGCCGACGCCCTCGTCAGCCACGAGGAA CGCGAGCGGATGCAGTCCGAGACGCTCAAGCTCGTCTTCGCCACCTACTTCCGCATCTTGAAGCTGCGCCTGCCG CGCCTCATGGGCGCAGTCCTCGAAGGCCTCGCCCGCTACGCCCATCTCATCAACCAGGACTTCTTCGGCGACCTG CTCGAGGCGCTCAAGGACCTGATCCGTCACAGCGACGACGATGCCGACGCCGGCCCGGCCGACGACGTCGGCGGC GGTGACGACGACGACGACGGGACGCGGCGTCACGCATCCTGCCGAAACCTGACTCGCGAGGCCCTCCTCTGCACC GTCACGGCCTTCGCCCTCCTCGCCGGTCAGGACGCCCACAACGCCCGCCGCGAGCTGCACCTCGACCTGTCCTTC TTCACCGTCCACCTCTTCAGAAGCCTCCTGTCGCTCTCGACGGATCCAGACCTCGAGAACAGCGGCCCGTCCGCC TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGTGTCAACTTCCAGACGACGACGGTGCTGCTCATC CGCTCCCTGACGGGCGTCCTGCTGCCACCCTGGAACATACGCCAGGTTCCGCCCCTGCGCCTCGCCGCCTTCACC AAGCAGCTCATGACGGCCGCCCTGCAGCTGCCCGACCGCTCGGCCCAGGCCGTCCTGGCCCTCGTTGCCGACGTC GCCGCCACCCATTCCGCCAAAGTTGCCAGCTTGTGGCACACCGAGGAGCGCAAGGGCGACGGCGCCTTCAACGCC CTCAGCGAGACCGTCGAGGGCAGCAACCCCCTCGCCTCCACCGTCTGGGAGGGCGAGCTGCTGAGGAGGCACTAC TCGCCCAAGGTCAGGGAGGCCGTCAAGATGCTGGAGAAGAGCGTGTCGTCAAGGTGA |
| Transcript | >Hirsu2|5507 ATGAGCTCCAATGGGCACAAGAGGCGAAAGGTAGCGCACAACTCGTCGGACGACGAGGGGCAGCAGCGGCAACGA TCCAAACAGACGCAAAAGGACTTCTTCAAGCACGCGTCCAACTGGAACCTGGAGCAGGACTACGAGCTGAGGCGG CGGAAGAGCAAGAAGAAGGCCAAGGAGAGCACCAAGCTGCCGCAGATCAAGACGACCGACGGCCGGGTCGAGATC CTGCAGAGCCTGCAGACCGAGGACGATGCCGGCTCGGTAGCCAGCGACGACGACTGGCTCGACGGCCGCGAGGAC GAGCTCGAGCCTGAGCCGGACCGGGCCGAGGAGGCCGAGGCCGAGGACGAGAGGCCCGAGGACCAGCAGGTGCTG GAGGCGAAGGAGGAGCTGGCCAAGCTGGCGACGGCCGTCAACGAGAAGCCCGAGGCGAACGCGGGCGCGCTCAAG GCGCTGGCCAAGATCGGCCAGTCGCGGGTCCCCGCCGTCCAGATGCTGGCGCTCCTGACGCAGATGGCCGTCTAT AAGGACATCATCCCCGGGTACCGGATCCGGCCGCTGTCCGAGGAGGCGCAGAAAGAGAAGGTCTCCAAGGAGGTG CGCCGGATGCGGCAGTTCGAGCAGGCGCTCGTCCACGGCTACCAAGGCTACGTCCGCGAGCTGGCGCGGTGCGCT AAGGCCGCCGCGCCCCGCCCGCCGCCGCCGCCCGGCGGACAGAGCCTGGCCAGCGTGGCCGTCAGCTGCGCTTGC GCCCTCGTCACGGCCGTGCCGCACTTCAACTTCCGCTCCGACCTGCTCCAGATCCTGGTCGGGCGGCTGAGCCGG CGCGCGGGGGCCGCCAACGACGAGGCGGCGGCCCGGTGCCGGGGCGCGCTCGAGACGCTGTTCCGCGACGACGAC GAGGGTCGGCCCTCGTTCGAGGCCGTCTCGCTCCTGGCCAAGATGATGCGCGCGCGCGACTTCGACGTCGACGAG CGCGTCCTCGACCTCTTCCTCAGCCTGCGCCTGCTGTCCGAGTTCGCCGGCACCGCGTCCGGCGACCGGGTCGAG CGCCGGCCGGACGGCGGCCGCCCCCCGGAGACGCCGAGGAAGAAGGCCAAACGCGAGTTCCGCACCAAGCGCGAG CGGAAGGCGCTCAAGGAGCAGAAGGCGCTGGACCGCGACATGGCCCAGGCCGACGCCCTCGTCAGCCACGAGGAA CGCGAGCGGATGCAGTCCGAGACGCTCAAGCTCGTCTTCGCCACCTACTTCCGCATCTTGAAGCTGCGCCTGCCG CGCCTCATGGGCGCAGTCCTCGAAGGCCTCGCCCGCTACGCCCATCTCATCAACCAGGACTTCTTCGGCGACCTG CTCGAGGCGCTCAAGGACCTGATCCGTCACAGCGACGACGATGCCGACGCCGGCCCGGCCGACGACGTCGGCGGC GGTGACGACGACGACGACGGGACGCGGCGTCACGCATCCTGCCGAAACCTGACTCGCGAGGCCCTCCTCTGCACC GTCACGGCCTTCGCCCTCCTCGCCGGTCAGGACGCCCACAACGCCCGCCGCGAGCTGCACCTCGACCTGTCCTTC TTCACCGTCCACCTCTTCAGAAGCCTCCTGTCGCTCTCGACGGATCCAGACCTCGAGAACAGCGGCCCGTCCGCC TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGTGTCAACTTCCAGACGACGACGGTGCTGCTCATC CGCTCCCTGACGGGCGTCCTGCTGCCACCCTGGAACATACGCCAGGTTCCGCCCCTGCGCCTCGCCGCCTTCACC AAGCAGCTCATGACGGCCGCCCTGCAGCTGCCCGACCGCTCGGCCCAGGCCGTCCTGGCCCTCGTTGCCGACGTC GCCGCCACCCATTCCGCCAAAGTTGCCAGCTTGTGGCACACCGAGGAGCGCAAGGGCGACGGCGCCTTCAACGCC CTCAGCGAGACCGTCGAGGGCAGCAACCCCCTCGCCTCCACCGTCTGGGAGGGCGAGCTGCTGAGGAGGCACTAC TCGCCCAAGGTCAGGGAGGCCGTCAAGATGCTGGAGAAGAGCGTGTCGTCAAGGTGA |
| Gene | >Hirsu2|5507 ATGAGCTCCAATGGGCACAAGAGGCGAAAGGTAGCGCACAACTCGTCGGACGACGAGGGGCAGCAGCGGCAACGA TCCAAACAGACGCAAAAGGACTTCTTCAAGCACGCGTCCAACTGGAACCTGGAGCAGGACTACGAGCTGAGGCGG CGGAAGAGCAAGAAGAAGGCCAAGGAGAGCACCAAGCTGCCGCAGATCAAGACGACCGACGGCCGGGTCGAGATC CTGCAGAGCCTGCAGACCGAGGACGATGCCGGCTCGGTAGCCAGCGACGACGACTGGCTCGACGGCCGCGAGGAC GAGCTCGAGCCTGAGCCGGACCGGGCCGAGGAGGCCGAGGCCGAGGACGAGAGGCCCGAGGACCAGCAGGTGCTG GAGGCGAAGGAGGAGCTGGCCAAGCTGGCGACGGCCGTCAACGAGAAGCCCGAGGCGAACGCGGGCGCGCTCAAG GCGCTGGCCAAGATCGGCCAGTCGCGGGTCCCCGCCGTCCAGATGCTGGCGCTCCTGACGCAGATGGCCGTCTAT AAGGACATCATCCCCGGGTACCGGATCCGGCCGCTGTCCGAGGAGGCGCAGAAAGAGAAGGTCTCCAAGGAGGTG CGCCGGATGCGGCAGTTCGAGCAGGCGCTCGTCCACGGCTACCAAGGCTACGTCCGCGAGCTGGCGCGGTGCGCT AAGGCCGCCGCGCCCCGCCCGCCGCCGCCGCCCGGCGGACAGAGCCTGGCCAGCGTGGCCGTCAGCTGCGCTTGC GCCCTCGTCACGGCCGTGCCGCACTTCAACTTCCGCTCCGACCTGCTCCAGATCCTGGTCGGGCGGCTGAGCCGG CGCGCGGGGGCCGCCAACGACGAGGCGGCGGCCCGGTGCCGGGGCGCGCTCGAGACGCTGTTCCGCGACGACGAC GAGGGTCGGCCCTCGTTCGAGGCCGTCTCGCTCCTGGCCAAGATGATGCGCGCGCGCGACTTCGACGTCGACGAG CGCGTCCTCGACCTCTTCCTCAGCCTGCGCCTGCTGTCCGAGTTCGCCGGCACCGCGTCCGGCGACCGGGTCGAG CGCCGGCCGGACGGCGGCCGCCCCCCGGAGACGCCGAGGAAGAAGGCCAAACGCGAGTTCCGCACCAAGCGCGAG CGGAAGGCGCTCAAGGAGCAGAAGGCGCTGGACCGCGACATGGCCCAGGCCGACGCCCTCGTCAGCCACGAGGAA CGCGAGCGGATGCAGTCCGAGACGCTCAAGCTCGTCTTCGCCACCTACTTCCGCATCTTGAAGCTGCGCCTGCCG CGCCTCATGGGCGCAGTCCTCGAAGGCCTCGCCCGCTACGCCCATCTCATCAACCAGGACTTCTTCGGCGACCTG CTCGAGGCGCTCAAGGACCTGATCCGTCACAGCGACGACGATGCCGACGCCGGCCCGGCCGACGACGTCGGCGGC GGTGACGACGACGACGACGGGACGCGGCGTCACGCATCCTGCCGAAACCTGACTCGCGAGGCCCTCCTCTGCACC GTCACGGCCTTCGCCCTCCTCGCCGGTCAGGACGCCCACAACGCCCGCCGCGAGCTGCACCTCGACCTGTCCTTC TTCACCGTCCACCTCTTCAGAAGCCTCCTGTCGCTCTCGACGGATCCAGACCTCGAGAACAGCGGCCCGTCCGCC TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGTGTCAACTTCCAGACGACGACGGTGCTGCTCATC CGCTCCCTGACGGGCGTCCTGCTGCCACCCTGGAACATACGCCAGGTTCCGCCCCTGCGCCTCGCCGCCTTCACC AAGCAGCTCATGACGGCCGCCCTGCAGCTGCCCGACCGCTCGGCCCAGGCCGTCCTGGCCCTCGTTGCCGACGTC GCCGCCACCCATTCCGCCAAAGTTGCCAGCTTGTGGCACACCGAGGAGCGCAAGGGCGACGGCGCCTTCAACGCC CTCAGCGAGACCGTCGAGGGCAGCAACCCCCTCGCCTCCACCGTCTGGGAGGGCGAGCTGCTGAGGAGGCACTAC TCGCCCAAGGTCAGGGAGGCCGTCAAGATGCTGGAGAAGAGCGTGTCGTCAAGGTGA |