Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|5505
Gene name
Location	Contig_276:3976..5219
Strand	+
Gene length (bp)	1243
Transcript length (bp)	1071
Coding sequence length (bp)	1071
Protein length (aa)	357

PFAM Domains

(None)

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q1JQ66\|S35E3_DANRE	Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1	56	344	1.0E-41
sp\|Q7Z769\|S35E3_HUMAN	Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1	55	344	7.0E-40
sp\|A4IFK2\|S35E3_BOVIN	Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1	55	354	1.0E-38
sp\|Q6PGC7\|S35E3_MOUSE	Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1	55	344	1.0E-37
sp\|Q8RXL8\|Y1689_ARATH	Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1	72	344	9.0E-28

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q1JQ66\|S35E3_DANRE	Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1	56	344	1.0E-41
sp\|Q7Z769\|S35E3_HUMAN	Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1	55	344	7.0E-40
sp\|A4IFK2\|S35E3_BOVIN	Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1	55	354	1.0E-38
sp\|Q6PGC7\|S35E3_MOUSE	Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1	55	344	1.0E-37
sp\|Q8RXL8\|Y1689_ARATH	Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1	72	344	9.0E-28
sp\|Q9SRE4\|UGAL2_ARATH	UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1	41	344	6.0E-19
sp\|Q550W6\|FUCT1_DICDI	GDP-fucose transporter 1 OS=Dictyostelium discoideum GN=slc35c1 PE=3 SV=1	46	345	1.0E-12
sp\|Q9SFE9\|GONS5_ARATH	GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1	49	346	3.0E-10
sp\|Q9C521\|UGAL1_ARATH	UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1	49	346	2.0E-09
sp\|A9UUB8\|FUCT1_MONBE	GDP-fucose transporter 1 OS=Monosiga brevicollis GN=slc35c1 PE=3 SV=1	65	311	5.0E-08
sp\|A7S1L6\|FUCT1_NEMVE	GDP-fucose transporter 1 OS=Nematostella vectensis GN=slc35c1 PE=3 SV=1	65	311	5.0E-06

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 65	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	51	70	19
2	83	105	22
3	125	147	22
4	168	190	22
5	205	227	22
6	240	258	18
7	273	295	22
8	329	348	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|5505 MSSLLPPPRAEPDAVSPAESKEKMSLPATDDSVEAALILLPPLSDPKPQSLAAAAAWMSVNTLATIGIVFTNKAI FSDPSWTLSQLSFASFHFLVTWATLFVMSRPTFACFAPRRASIQHLLPLALAMSLNVILPNLSLAFSSVTFYQLA RILLTPTVALMNFVLYRAALPTLAIVALVPACLGVGIVSYYDSLPTSNSSIKTTSPLGIVFAFLGILASSLYTVW IASYHRKLQMNSMQLLYNQAPIAAFMLLYAIPFLDTVPDLTRVSASKWLTIALSGLFASLINMSQFFIVVQTGPV SSTVVGHVKTCTIVCIGWVMSGRPVGDRALVGVVVAVAAVVAYSIVMLEHNARKLG*
Coding	>Hirsu2\|5505 ATGAGCTCACTTCTCCCGCCACCTCGCGCCGAGCCCGACGCCGTTTCGCCGGCAGAGAGCAAGGAGAAGATGAGC TTGCCGGCGACCGACGACAGTGTCGAGGCCGCTCTGATTCTTCTCCCGCCGCTGTCCGATCCGAAACCCCAAAGC TTGGCGGCGGCAGCTGCTTGGATGAGCGTCAACACGCTGGCGACGATTGGAATTGTCTTCACCAACAAGGCCATC TTTTCCGATCCTTCCTGGACGCTGTCCCAGCTATCCTTCGCCTCCTTTCACTTCCTCGTCACCTGGGCCACCCTC TTCGTCATGTCGAGGCCGACCTTTGCCTGCTTTGCTCCCCGCCGCGCCTCCATCCAGCACCTGCTCCCTCTCGCC CTTGCCATGAGCCTCAACGTCATCCTTCCCAATCTCTCCTTGGCCTTCTCCTCCGTCACCTTCTACCAGCTGGCC CGCATCCTGCTCACCCCAACCGTTGCCCTGATGAACTTCGTCCTGTACCGAGCAGCTCTGCCGACGCTCGCCATC GTCGCCCTCGTCCCGGCCTGTCTGGGCGTCGGCATCGTCTCGTACTACGACTCCCTCCCGACGTCCAATTCCAGC ATCAAGACAACATCGCCCCTCGGCATTGTCTTTGCCTTCCTTGGCATCCTGGCCTCCTCTCTCTACACCGTCTGG ATCGCCAGCTATCACCGAAAGCTGCAGATGAATAGCATGCAGCTCCTCTACAACCAGGCACCAATTGCCGCATTC ATGCTTCTATACGCCATACCCTTCCTCGATACAGTCCCTGATCTGACCCGCGTTTCCGCGAGCAAATGGCTGACG ATTGCTCTGTCCGGACTTTTCGCCTCCCTCATCAACATGTCTCAGTTTTTTATTGTAGTCCAGACGGGCCCGGTC TCAAGCACCGTCGTGGGACACGTCAAGACCTGTACCATCGTGTGCATTGGATGGGTCATGTCAGGCCGACCCGTG GGCGACAGGGCCTTGGTCGGGGTAGTGGTAGCCGTCGCCGCAGTCGTCGCATACTCCATTGTCATGTTGGAGCAC AACGCGCGCAAACTCGGGTAG
Transcript	>Hirsu2\|5505 ATGAGCTCACTTCTCCCGCCACCTCGCGCCGAGCCCGACGCCGTTTCGCCGGCAGAGAGCAAGGAGAAGATGAGC TTGCCGGCGACCGACGACAGTGTCGAGGCCGCTCTGATTCTTCTCCCGCCGCTGTCCGATCCGAAACCCCAAAGC TTGGCGGCGGCAGCTGCTTGGATGAGCGTCAACACGCTGGCGACGATTGGAATTGTCTTCACCAACAAGGCCATC TTTTCCGATCCTTCCTGGACGCTGTCCCAGCTATCCTTCGCCTCCTTTCACTTCCTCGTCACCTGGGCCACCCTC TTCGTCATGTCGAGGCCGACCTTTGCCTGCTTTGCTCCCCGCCGCGCCTCCATCCAGCACCTGCTCCCTCTCGCC CTTGCCATGAGCCTCAACGTCATCCTTCCCAATCTCTCCTTGGCCTTCTCCTCCGTCACCTTCTACCAGCTGGCC CGCATCCTGCTCACCCCAACCGTTGCCCTGATGAACTTCGTCCTGTACCGAGCAGCTCTGCCGACGCTCGCCATC GTCGCCCTCGTCCCGGCCTGTCTGGGCGTCGGCATCGTCTCGTACTACGACTCCCTCCCGACGTCCAATTCCAGC ATCAAGACAACATCGCCCCTCGGCATTGTCTTTGCCTTCCTTGGCATCCTGGCCTCCTCTCTCTACACCGTCTGG ATCGCCAGCTATCACCGAAAGCTGCAGATGAATAGCATGCAGCTCCTCTACAACCAGGCACCAATTGCCGCATTC ATGCTTCTATACGCCATACCCTTCCTCGATACAGTCCCTGATCTGACCCGCGTTTCCGCGAGCAAATGGCTGACG ATTGCTCTGTCCGGACTTTTCGCCTCCCTCATCAACATGTCTCAGTTTTTTATTGTAGTCCAGACGGGCCCGGTC TCAAGCACCGTCGTGGGACACGTCAAGACCTGTACCATCGTGTGCATTGGATGGGTCATGTCAGGCCGACCCGTG GGCGACAGGGCCTTGGTCGGGGTAGTGGTAGCCGTCGCCGCAGTCGTCGCATACTCCATTGTCATGTTGGAGCAC AACGCGCGCAAACTCGGGTAG
Gene	>Hirsu2\|5505 ATGAGCTCACTTCTCCCGCCACCTCGCGCCGAGCCCGACGCCGTTTCGCCGGCAGAGAGCAAGGAGAAGATGAGC TTGCCGGCGACCGACGACAGTGTCGAGGCCGCTCTGATTCTTCTCCCGCCGCTGTCCGATCCGAAACCCCAAAGC TTGGCGGCGGCAGCTGCTTGGATGAGCGTCAACACGCTGGCGACGATTGGAATTGTACGCCCCTTTCTTGGCCCG ACATGCACCCTCGCTCACCGGCCATCCGGCAGGTCTTCACCAACAAGGCCATCTTTTCCGATCCTTCCTGGACGC TGTCCCAGCTATCCTTCGCCTCCTTTCACTTCCTCGTCACCTGGGCCACCCTCTTCGTCATGTCGAGGCCGACCT TTGCCTGCTTTGCTCCCCGCCGCGCCTCCATCCAGCACCTGCTCCCTCTCGCCCTTGCCATGAGCCTCAACGTCA TCCTTCCCAATCTCTCCTTGGCCTTCTCCTCCGTCACCTTCTACCAGCTGGCCCGCATCCTGCTCACCCCAACCG TTGCCCTGATGAACTTCGTCCTGTACCGAGCAGCTCTGCCGACGCTCGCCATCGTCGCCCTCGTCCCGGCCTGTC TGGGCGTCGGCATCGTCTCGTACTACGACTCCCTCCCGACGTCCAATTCCAGCATCAAGACAACATCGCCCCTCG GCATTGTCTTTGCCTTCCTTGGCATCCTGGCCTCCTCTCTCTACACCGTCTGGATCGCCAGCTATCACCGAAAGC TGCAGATGAATAGCATGCAGCTCCTCTACAACCAGGCACCAATTGCCGCATTCATGCTTCTATACGCCATACCCT TCCTCGATACAGTCCCTGATCTGACCCGCGTTTCCGCGAGCAAATGGCTGACGATTGCTCTGGTGCGTCGATCCG TCAACCCTCGACTGCAGCTTCTGACGACTTCAAGTCCGGACTTTTCGCCTCCCTCATCAACATGTCTCAGTTTTT TATTGTAGTCCAGACGGGCCCGGTCTCAAGCACCGTCGTGGGACACGTCAAGACCTGTACCATCGTGTGCATTGG ATGGGTCATGTCAGGCCGACCCGTGGGCGACAGGGCCTTGGTCGGGGTAGTGGTAGCCGTCGCCGCAGTCGTCGC GTGAGTTTCATTGCGTTCTGTCCCCCACAGCTTGTCCCCATCTCAGTGGGCGATTGCTCACCTACGACGCAGATA CTCCATTGTCATGTTGGAGCACAACGCGCGCAAACTCGGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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