Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5496
Gene name
LocationContig_275:23709..25484
Strand+
Gene length (bp)1775
Transcript length (bp)1629
Coding sequence length (bp)1629
Protein length (aa) 543

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00144 Beta-lactamase Beta-lactamase 5.3E-45 56 370

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q6GDZ1|FLP_STAAR Protein flp OS=Staphylococcus aureus (strain MRSA252) GN=flp PE=3 SV=1 45 366 2.0E-14
sp|Q5HDB2|FLP_STAAC Protein flp OS=Staphylococcus aureus (strain COL) GN=flp PE=4 SV=1 45 366 4.0E-14
sp|Q6G6M9|FLP_STAAS Protein flp OS=Staphylococcus aureus (strain MSSA476) GN=flp PE=3 SV=1 24 366 6.0E-14
sp|Q7A3Q5|FLP_STAAN Protein flp OS=Staphylococcus aureus (strain N315) GN=flp PE=1 SV=1 45 366 7.0E-14
sp|Q99RJ0|FLP_STAAM Protein flp OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=flp PE=3 SV=1 45 366 7.0E-14
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Swissprot ID Swissprot Description Start End E-value
sp|Q6GDZ1|FLP_STAAR Protein flp OS=Staphylococcus aureus (strain MRSA252) GN=flp PE=3 SV=1 45 366 2.0E-14
sp|Q5HDB2|FLP_STAAC Protein flp OS=Staphylococcus aureus (strain COL) GN=flp PE=4 SV=1 45 366 4.0E-14
sp|Q6G6M9|FLP_STAAS Protein flp OS=Staphylococcus aureus (strain MSSA476) GN=flp PE=3 SV=1 24 366 6.0E-14
sp|Q7A3Q5|FLP_STAAN Protein flp OS=Staphylococcus aureus (strain N315) GN=flp PE=1 SV=1 45 366 7.0E-14
sp|Q99RJ0|FLP_STAAM Protein flp OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=flp PE=3 SV=1 45 366 7.0E-14
sp|Q8NUZ4|FLP_STAAW Protein flp OS=Staphylococcus aureus (strain MW2) GN=flp PE=3 SV=1 24 366 8.0E-14
sp|Q9KJ74|FLP_STAAU Protein flp OS=Staphylococcus aureus GN=flp PE=4 SV=1 45 366 4.0E-13
sp|Q2FVH6|FLP_STAA8 Protein flp OS=Staphylococcus aureus (strain NCTC 8325) GN=flp PE=4 SV=1 45 366 4.0E-13
sp|P15555|DAC_STRSR D-alanyl-D-alanine carboxypeptidase OS=Streptomyces sp. (strain R61) PE=1 SV=2 60 375 7.0E-11
sp|A6WYS5|DAP_OCHA4 D-aminopeptidase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dap PE=3 SV=1 46 401 1.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5496
MARLSHLPGFAAAALALSSPRALVAAQKPVTSVQSPQGRNPLTDEFSSFVNDKLDEWKVPGMSVAVIDGQDVYAE
GYGYATLPDKRATPETVWECASTTKAQVAATLGQLIASDKYPELSNGWATKISSVIRDDFVLQDDWATNHVTFED
AASHRTGMPRHDKSSAHTVNGTQVTARDVVRNLRHLPMVSEPRVAFHYCNLMYEVLGHVIETVTGKWVGKVMRDI
LWDPLGMNSTFLESADSQRPEAMATGYYWDKQAQAYKEVAPQPIVEMSAAGGVRSTVLDYAQWVKCLLHEAEPLS
ASVHKEIKAPRITTTFFGDISLYALGWERRQHKGHVIYTHAGGVTSFGAQVYWLPEEKFGVVAFANTALTSNAVE
DVVIYRLIEDRLGISEGDRIDVGVMWRKNIGEYLRVPDNVDQVLFPDRPSPPLPSTFKVEDLVGRYSGPGYGEFT
LRQEPHPDKSGEKILVADRDDMTWRYRISMHHASGNYWGVYLTVPSNPTFFLEYLPAEFTTGVDGRVSTLIIDWI
VRMEGVDEGKVAFQKIA*
Coding >Hirsu2|5496
ATGGCTCGGCTTTCGCATCTTCCGGGCTTCGCCGCGGCGGCGCTTGCCCTGTCGTCTCCGAGGGCCCTTGTCGCG
GCACAGAAGCCGGTGACGTCCGTCCAGAGCCCACAGGGCAGAAACCCGCTCACGGACGAATTCTCTTCTTTTGTG
AACGATAAACTGGACGAATGGAAGGTTCCCGGCATGTCTGTGGCCGTCATTGATGGGCAGGACGTCTACGCCGAG
GGATATGGATACGCCACCCTGCCGGACAAGAGGGCCACGCCCGAGACTGTCTGGGAGTGCGCATCGACGACCAAG
GCGCAGGTGGCCGCGACCCTGGGGCAGCTCATTGCCTCGGACAAGTATCCCGAACTCTCCAACGGCTGGGCGACC
AAGATTTCGTCCGTCATCCGCGACGATTTCGTCCTACAGGACGATTGGGCGACGAACCACGTCACGTTCGAGGAT
GCCGCCAGCCACCGCACTGGGATGCCTCGTCATGACAAGTCGTCGGCGCACACCGTCAACGGCACCCAAGTCACG
GCGAGGGACGTCGTGCGGAACCTGCGGCACCTGCCCATGGTCAGCGAGCCGCGAGTGGCCTTCCATTACTGTAAC
CTGATGTATGAGGTGCTGGGACACGTCATCGAGACGGTCACGGGCAAGTGGGTTGGCAAGGTGATGCGCGATATC
CTCTGGGATCCGCTCGGTATGAACTCGACCTTCCTTGAATCCGCCGACTCGCAGAGGCCGGAGGCGATGGCGACG
GGCTACTACTGGGACAAGCAGGCGCAGGCGTACAAGGAGGTTGCGCCGCAGCCAATAGTGGAAATGAGCGCGGCC
GGTGGCGTCCGGTCGACCGTCCTCGATTACGCCCAGTGGGTCAAGTGCCTGCTTCACGAAGCCGAGCCGCTCTCG
GCGAGCGTCCATAAGGAGATCAAGGCGCCTCGGATCACGACGACCTTCTTCGGTGACATCAGCCTCTATGCACTC
GGCTGGGAACGTCGTCAGCACAAGGGTCACGTCATCTATACACACGCCGGAGGAGTGACTTCATTCGGCGCCCAG
GTGTACTGGCTGCCAGAAGAAAAGTTTGGCGTCGTTGCATTTGCCAATACAGCCTTGACGTCCAACGCCGTTGAA
GACGTTGTCATCTACCGCTTGATAGAGGATCGGCTAGGCATCTCGGAAGGCGACCGGATAGACGTGGGTGTCATG
TGGCGAAAAAACATCGGCGAGTATTTGCGCGTGCCGGACAACGTCGACCAAGTTCTCTTCCCCGATCGACCGAGC
CCGCCGCTGCCGTCCACCTTCAAGGTGGAAGACCTGGTCGGAAGATATTCAGGACCGGGTTATGGCGAATTCACA
CTGCGTCAGGAACCGCACCCAGACAAGTCAGGGGAGAAGATTCTTGTGGCAGACCGGGACGACATGACGTGGAGG
TACCGTATCAGTATGCATCACGCGTCTGGAAACTACTGGGGTGTCTACTTGACGGTGCCATCGAATCCGACATTC
TTTCTGGAATATCTGCCGGCCGAGTTCACGACGGGGGTTGATGGTCGGGTCTCTACACTCATCATCGACTGGATC
GTCCGGATGGAGGGCGTTGACGAGGGCAAGGTCGCCTTCCAGAAAATCGCATAG
Transcript >Hirsu2|5496
ATGGCTCGGCTTTCGCATCTTCCGGGCTTCGCCGCGGCGGCGCTTGCCCTGTCGTCTCCGAGGGCCCTTGTCGCG
GCACAGAAGCCGGTGACGTCCGTCCAGAGCCCACAGGGCAGAAACCCGCTCACGGACGAATTCTCTTCTTTTGTG
AACGATAAACTGGACGAATGGAAGGTTCCCGGCATGTCTGTGGCCGTCATTGATGGGCAGGACGTCTACGCCGAG
GGATATGGATACGCCACCCTGCCGGACAAGAGGGCCACGCCCGAGACTGTCTGGGAGTGCGCATCGACGACCAAG
GCGCAGGTGGCCGCGACCCTGGGGCAGCTCATTGCCTCGGACAAGTATCCCGAACTCTCCAACGGCTGGGCGACC
AAGATTTCGTCCGTCATCCGCGACGATTTCGTCCTACAGGACGATTGGGCGACGAACCACGTCACGTTCGAGGAT
GCCGCCAGCCACCGCACTGGGATGCCTCGTCATGACAAGTCGTCGGCGCACACCGTCAACGGCACCCAAGTCACG
GCGAGGGACGTCGTGCGGAACCTGCGGCACCTGCCCATGGTCAGCGAGCCGCGAGTGGCCTTCCATTACTGTAAC
CTGATGTATGAGGTGCTGGGACACGTCATCGAGACGGTCACGGGCAAGTGGGTTGGCAAGGTGATGCGCGATATC
CTCTGGGATCCGCTCGGTATGAACTCGACCTTCCTTGAATCCGCCGACTCGCAGAGGCCGGAGGCGATGGCGACG
GGCTACTACTGGGACAAGCAGGCGCAGGCGTACAAGGAGGTTGCGCCGCAGCCAATAGTGGAAATGAGCGCGGCC
GGTGGCGTCCGGTCGACCGTCCTCGATTACGCCCAGTGGGTCAAGTGCCTGCTTCACGAAGCCGAGCCGCTCTCG
GCGAGCGTCCATAAGGAGATCAAGGCGCCTCGGATCACGACGACCTTCTTCGGTGACATCAGCCTCTATGCACTC
GGCTGGGAACGTCGTCAGCACAAGGGTCACGTCATCTATACACACGCCGGAGGAGTGACTTCATTCGGCGCCCAG
GTGTACTGGCTGCCAGAAGAAAAGTTTGGCGTCGTTGCATTTGCCAATACAGCCTTGACGTCCAACGCCGTTGAA
GACGTTGTCATCTACCGCTTGATAGAGGATCGGCTAGGCATCTCGGAAGGCGACCGGATAGACGTGGGTGTCATG
TGGCGAAAAAACATCGGCGAGTATTTGCGCGTGCCGGACAACGTCGACCAAGTTCTCTTCCCCGATCGACCGAGC
CCGCCGCTGCCGTCCACCTTCAAGGTGGAAGACCTGGTCGGAAGATATTCAGGACCGGGTTATGGCGAATTCACA
CTGCGTCAGGAACCGCACCCAGACAAGTCAGGGGAGAAGATTCTTGTGGCAGACCGGGACGACATGACGTGGAGG
TACCGTATCAGTATGCATCACGCGTCTGGAAACTACTGGGGTGTCTACTTGACGGTGCCATCGAATCCGACATTC
TTTCTGGAATATCTGCCGGCCGAGTTCACGACGGGGGTTGATGGTCGGGTCTCTACACTCATCATCGACTGGATC
GTCCGGATGGAGGGCGTTGACGAGGGCAAGGTCGCCTTCCAGAAAATCGCATAG
Gene >Hirsu2|5496
ATGGCTCGGCTTTCGCATCTTCCGGGCTTCGCCGCGGCGGCGCTTGCCCTGTCGTCTCCGAGGGCCCTTGTCGCG
GCACAGAAGCCGGTGACGTCCGTCCAGAGCCCACAGGGCAGAAACCCGCTCACGGACGAATTCTCTTCTTTTGTG
AACGATAAACTGGACGAATGGAAGGTTCCCGGCATGTCTGTGGCCGTCATTGATGGGCAGGACGTCTACGCCGAG
GTCCGTTGGCTCGCAGTGACGGCTCCCTTTGGCGACAGTGCAAGCTTCGGCCTGGATAGACGGGCACTGACTCGA
CCCTTCTTAGGGATATGGATACGCCACCCTGCCGGACAAGAGGGCCACGCCCGAGACTGTCTGGGAGTGCGCATC
GACGACCAAGGCGCAGGTGGCCGCGACCCTGGGGCAGCTCATTGCCTCGGACAAGTATCCCGAACTCTCCAACGG
CTGGGCGACCAAGATTTCGTCCGTCATCCGCGACGATTTCGTCCTACAGGACGATTGGGCGACGAACCACGTCAC
GTTCGAGGATGCCGCCAGCCACCGCACTGGGATGCCTCGTCATGACAAGTCGTCGGCGCACACCGTCAACGGCAC
CCAAGTCACGGCGAGGGACGTCGTGCGGAACCTGCGGCACCTGCCCATGGTCAGCGAGCCGCGAGTGGCCTTCCA
TTACTGTAACCTGATGTATGAGGTGCTGGGACACGTCATCGAGACGGTCACGGGCAAGTGGGTTGGCAAGGTGAT
GCGCGATATCCTCTGGGATCCGCTCGGTATGAACTCGACCTTCCTTGAATCCGCCGACTCGCAGAGGCCGGAGGC
GATGGCGACGGGCTACTACTGGGACAAGCAGGCGCAGGCGTACAAGGAGGTTGCGCCGCAGCCAATAGTGGAAAT
GAGCGCGGCCGGTGGCGTCCGGTCGACCGTCCTCGATTACGCCCAGTGGGTCAAGTGCCTGCTTCACGAAGCCGA
GCCGCTCTCGGCGAGCGTCCATAAGGAGATCAAGGCGCCTCGGATCACGACGACCTTCTTCGGTGACATCAGCCT
CTATGCACTCGGCTGGGAACGTCGTCAGCACAAGGGTCACGTCATCTATACACACGCCGGAGGAGTGACTTCATT
CGGCGCCCAGGTGTACTGGCTGCCAGAAGAAAAGTTTGGCGTCGTTGCATTTGCCAATACAGCCTTGACGTCCAA
CGCCGTTGAAGACGTTGTCATCTACCGCTTGATAGAGGATCGGCTAGGCATCTCGGAAGGCGACCGGATAGACGT
GGGTGTCATGTAAGTCTTCATCTCGGGAGTCATGTACACGGGAGACGGCTTTGCTAAAGTCGAGGCTCAGGTGGC
GAAAAAACATCGGCGAGTATTTGCGCGTGCCGGACAACGTCGACCAAGTTCTCTTCCCCGATCGACCGAGCCCGC
CGCTGCCGTCCACCTTCAAGGTGGAAGACCTGGTCGGAAGATATTCAGGACCGGGTTATGGCGAATTCACACTGC
GTCAGGAACCGCACCCAGACAAGTCAGGGGAGAAGATTCTTGTGGCAGACCGGGACGACATGACGTGGAGGTACC
GTATCAGTATGCATCACGCGTCTGGAAACTACTGGGGTGTCTACTTGACGGTGCCATCGAATCCGACATTCTTTC
TGGAATATCTGCCGGCCGAGTTCACGACGGGGGTTGATGGTCGGGTCTCTACACTCATCATCGACTGGATCGTCC
GGATGGAGGGCGTTGACGAGGGCAAGGTCGCCTTCCAGAAAATCGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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