© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5461 |
| Gene name | |
| Location | Contig_2731:683..1634 |
| Strand | + |
| Gene length (bp) | 951 |
| Transcript length (bp) | 834 |
| Coding sequence length (bp) | 834 |
| Protein length (aa) | 278 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13430 | DUF4112 | Domain of unknown function (DUF4112) | 1.3E-33 | 64 | 167 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q06170|YL326_YEAST | Uncharacterized membrane protein YLR326W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR326W PE=1 SV=1 | 26 | 177 | 1.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 76 | 98 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5461 MASFAAKVVSKKILGETLQNKYGKEDPYFEQVPATRLDGRPTGKFKKRKKALPPGISEHDGQVLTKVKRRAHRLD LALCSFLGIRFGWSSVIALVPAIGDALDAFMALMVFKTCCKVEGGLPSSIKLQMLANITFDFAVGLVPFIGDLAD AMFKANTRNCLLLEQHLREKGKKELRKSGLPIPAIDPSSPEEFDRAQQESPPGYHTDPASRHGSTAAASRFAHVN HMPSAPEEARVRTSGGAWFSRHLSRPHDVELGPDEDRRGKIRRPDPQQQGRR* |
| Coding | >Hirsu2|5461 ATGGCCTCTTTCGCTGCCAAAGTAGTGAGCAAGAAGATTCTGGGCGAGACACTACAGAACAAATATGGCAAAGAG GATCCCTACTTTGAGCAGGTTCCCGCCACCCGACTGGACGGTAGACCCACTGGCAAATTCAAGAAGCGGAAGAAG GCTCTGCCACCCGGCATCTCGGAGCACGACGGGCAAGTGTTGACCAAGGTCAAGAGACGGGCGCACCGCCTTGAT TTAGCGCTGTGCAGCTTCTTGGGGATACGTTTCGGCTGGAGCAGCGTGATTGCGCTGGTACCCGCCATCGGGGAC GCATTGGACGCCTTCATGGCGCTCATGGTTTTTAAGACGTGCTGCAAGGTGGAGGGCGGCCTGCCAAGCTCGATC AAGCTACAGATGCTCGCCAATATTACTTTTGACTTCGCCGTTGGCTTGGTTCCATTTATCGGCGACCTTGCCGAT GCCATGTTCAAGGCCAACACCCGTAACTGTCTTCTATTAGAGCAGCACCTTCGTGAAAAGGGTAAGAAGGAGCTG CGAAAGAGCGGCCTGCCGATTCCGGCCATTGACCCCAGCAGTCCCGAGGAGTTTGATAGAGCGCAGCAGGAAAGC CCCCCTGGATACCACACAGATCCTGCGTCGCGCCACGGATCGACCGCCGCCGCATCCCGGTTTGCTCATGTGAAC CACATGCCGAGTGCTCCGGAAGAGGCCCGAGTTCGGACAAGCGGCGGTGCCTGGTTCAGCCGCCACTTGTCTCGC CCTCACGACGTTGAGCTGGGTCCGGACGAGGACAGGCGCGGCAAAATACGCCGGCCAGATCCGCAGCAGCAGGGC CGCAGATGA |
| Transcript | >Hirsu2|5461 ATGGCCTCTTTCGCTGCCAAAGTAGTGAGCAAGAAGATTCTGGGCGAGACACTACAGAACAAATATGGCAAAGAG GATCCCTACTTTGAGCAGGTTCCCGCCACCCGACTGGACGGTAGACCCACTGGCAAATTCAAGAAGCGGAAGAAG GCTCTGCCACCCGGCATCTCGGAGCACGACGGGCAAGTGTTGACCAAGGTCAAGAGACGGGCGCACCGCCTTGAT TTAGCGCTGTGCAGCTTCTTGGGGATACGTTTCGGCTGGAGCAGCGTGATTGCGCTGGTACCCGCCATCGGGGAC GCATTGGACGCCTTCATGGCGCTCATGGTTTTTAAGACGTGCTGCAAGGTGGAGGGCGGCCTGCCAAGCTCGATC AAGCTACAGATGCTCGCCAATATTACTTTTGACTTCGCCGTTGGCTTGGTTCCATTTATCGGCGACCTTGCCGAT GCCATGTTCAAGGCCAACACCCGTAACTGTCTTCTATTAGAGCAGCACCTTCGTGAAAAGGGTAAGAAGGAGCTG CGAAAGAGCGGCCTGCCGATTCCGGCCATTGACCCCAGCAGTCCCGAGGAGTTTGATAGAGCGCAGCAGGAAAGC CCCCCTGGATACCACACAGATCCTGCGTCGCGCCACGGATCGACCGCCGCCGCATCCCGGTTTGCTCATGTGAAC CACATGCCGAGTGCTCCGGAAGAGGCCCGAGTTCGGACAAGCGGCGGTGCCTGGTTCAGCCGCCACTTGTCTCGC CCTCACGACGTTGAGCTGGGTCCGGACGAGGACAGGCGCGGCAAAATACGCCGGCCAGATCCGCAGCAGCAGGGC CGCAGATGA |
| Gene | >Hirsu2|5461 ATGGCCTCTTTCGCTGCCAAAGTAGTGAGCAAGAAGATTCTGGGCGAGACACTACAGAACAAATATGGCAAAGAG GTACGCCCGCCGAACTCGCGTGCGCAAGCTCTCGCCCGCCCACCCTGACATTCCCTGGCTTTAGGATCCCTACTT TGAGCAGGTTCCCGCCACCCGACTGGACGGTAGACCCACTGGCAAATTCAAGAAGCGGAAGAAGGCTCTGCCACC CGGCATCTCGGAGCACGACGGGCAAGTGTTGACCAAGGTCAAGAGACGGGCGCACCGCCTTGATTTAGCGCTGTG CAGCTTCTTGGGGATACGTTTCGGCTGGAGCAGCGTGATTGCGCTGGTACCCGCGTGAGTCGATCGGATAGGTCA CGAACCCCATTCCCGTTCTGACAAACTCGTAGCATCGGGGACGCATTGGACGCCTTCATGGCGCTCATGGTTTTT AAGACGTGCTGCAAGGTGGAGGGCGGCCTGCCAAGCTCGATCAAGCTACAGATGCTCGCCAATATTACTTTTGAC TTCGCCGTTGGCTTGGTTCCATTTATCGGCGACCTTGCCGATGCCATGTTCAAGGCCAACACCCGTAACTGTCTT CTATTAGAGCAGCACCTTCGTGAAAAGGGTAAGAAGGAGCTGCGAAAGAGCGGCCTGCCGATTCCGGCCATTGAC CCCAGCAGTCCCGAGGAGTTTGATAGAGCGCAGCAGGAAAGCCCCCCTGGATACCACACAGATCCTGCGTCGCGC CACGGATCGACCGCCGCCGCATCCCGGTTTGCTCATGTGAACCACATGCCGAGTGCTCCGGAAGAGGCCCGAGTT CGGACAAGCGGCGGTGCCTGGTTCAGCCGCCACTTGTCTCGCCCTCACGACGTTGAGCTGGGTCCGGACGAGGAC AGGCGCGGCAAAATACGCCGGCCAGATCCGCAGCAGCAGGGCCGCAGATGA |