Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5461
Gene name
LocationContig_2731:683..1634
Strand+
Gene length (bp)951
Transcript length (bp)834
Coding sequence length (bp)834
Protein length (aa) 278

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13430 DUF4112 Domain of unknown function (DUF4112) 6.3E-34 64 167

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q06170|YL326_YEAST Uncharacterized membrane protein YLR326W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR326W PE=1 SV=1 26 177 1.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

Domain # Start End Length
1 76 98 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5461
MASFAAKVVSKKILGETLQNKYGKEDPYFEQVPATRLDGRPTGKFKKRKKALPPGISEHDGQVLTKVKRRAHRLD
LALCSFLGIRFGWSSVIALVPAIGDALDAFMALMVFKTCCKVEGGLPSSIKLQMLANITFDFAVGLVPFIGDLAD
AMFKANTRNCLLLEQHLREKGKKELRKSGLPIPAIDPSSPEEFDRAQQESPPGYHTDPASRHGSTAAASRFAHVN
HMPSAPEEARVRTSGGAWFSRHLSRPHDVELGPDEDRRGKIRRPDPQQQGRR*
Coding >Hirsu2|5461
ATGGCCTCTTTCGCTGCCAAAGTAGTGAGCAAGAAGATTCTGGGCGAGACACTACAGAACAAATATGGCAAAGAG
GATCCCTACTTTGAGCAGGTTCCCGCCACCCGACTGGACGGTAGACCCACTGGCAAATTCAAGAAGCGGAAGAAG
GCTCTGCCACCCGGCATCTCGGAGCACGACGGGCAAGTGTTGACCAAGGTCAAGAGACGGGCGCACCGCCTTGAT
TTAGCGCTGTGCAGCTTCTTGGGGATACGTTTCGGCTGGAGCAGCGTGATTGCGCTGGTACCCGCCATCGGGGAC
GCATTGGACGCCTTCATGGCGCTCATGGTTTTTAAGACGTGCTGCAAGGTGGAGGGCGGCCTGCCAAGCTCGATC
AAGCTACAGATGCTCGCCAATATTACTTTTGACTTCGCCGTTGGCTTGGTTCCATTTATCGGCGACCTTGCCGAT
GCCATGTTCAAGGCCAACACCCGTAACTGTCTTCTATTAGAGCAGCACCTTCGTGAAAAGGGTAAGAAGGAGCTG
CGAAAGAGCGGCCTGCCGATTCCGGCCATTGACCCCAGCAGTCCCGAGGAGTTTGATAGAGCGCAGCAGGAAAGC
CCCCCTGGATACCACACAGATCCTGCGTCGCGCCACGGATCGACCGCCGCCGCATCCCGGTTTGCTCATGTGAAC
CACATGCCGAGTGCTCCGGAAGAGGCCCGAGTTCGGACAAGCGGCGGTGCCTGGTTCAGCCGCCACTTGTCTCGC
CCTCACGACGTTGAGCTGGGTCCGGACGAGGACAGGCGCGGCAAAATACGCCGGCCAGATCCGCAGCAGCAGGGC
CGCAGATGA
Transcript >Hirsu2|5461
ATGGCCTCTTTCGCTGCCAAAGTAGTGAGCAAGAAGATTCTGGGCGAGACACTACAGAACAAATATGGCAAAGAG
GATCCCTACTTTGAGCAGGTTCCCGCCACCCGACTGGACGGTAGACCCACTGGCAAATTCAAGAAGCGGAAGAAG
GCTCTGCCACCCGGCATCTCGGAGCACGACGGGCAAGTGTTGACCAAGGTCAAGAGACGGGCGCACCGCCTTGAT
TTAGCGCTGTGCAGCTTCTTGGGGATACGTTTCGGCTGGAGCAGCGTGATTGCGCTGGTACCCGCCATCGGGGAC
GCATTGGACGCCTTCATGGCGCTCATGGTTTTTAAGACGTGCTGCAAGGTGGAGGGCGGCCTGCCAAGCTCGATC
AAGCTACAGATGCTCGCCAATATTACTTTTGACTTCGCCGTTGGCTTGGTTCCATTTATCGGCGACCTTGCCGAT
GCCATGTTCAAGGCCAACACCCGTAACTGTCTTCTATTAGAGCAGCACCTTCGTGAAAAGGGTAAGAAGGAGCTG
CGAAAGAGCGGCCTGCCGATTCCGGCCATTGACCCCAGCAGTCCCGAGGAGTTTGATAGAGCGCAGCAGGAAAGC
CCCCCTGGATACCACACAGATCCTGCGTCGCGCCACGGATCGACCGCCGCCGCATCCCGGTTTGCTCATGTGAAC
CACATGCCGAGTGCTCCGGAAGAGGCCCGAGTTCGGACAAGCGGCGGTGCCTGGTTCAGCCGCCACTTGTCTCGC
CCTCACGACGTTGAGCTGGGTCCGGACGAGGACAGGCGCGGCAAAATACGCCGGCCAGATCCGCAGCAGCAGGGC
CGCAGATGA
Gene >Hirsu2|5461
ATGGCCTCTTTCGCTGCCAAAGTAGTGAGCAAGAAGATTCTGGGCGAGACACTACAGAACAAATATGGCAAAGAG
GTACGCCCGCCGAACTCGCGTGCGCAAGCTCTCGCCCGCCCACCCTGACATTCCCTGGCTTTAGGATCCCTACTT
TGAGCAGGTTCCCGCCACCCGACTGGACGGTAGACCCACTGGCAAATTCAAGAAGCGGAAGAAGGCTCTGCCACC
CGGCATCTCGGAGCACGACGGGCAAGTGTTGACCAAGGTCAAGAGACGGGCGCACCGCCTTGATTTAGCGCTGTG
CAGCTTCTTGGGGATACGTTTCGGCTGGAGCAGCGTGATTGCGCTGGTACCCGCGTGAGTCGATCGGATAGGTCA
CGAACCCCATTCCCGTTCTGACAAACTCGTAGCATCGGGGACGCATTGGACGCCTTCATGGCGCTCATGGTTTTT
AAGACGTGCTGCAAGGTGGAGGGCGGCCTGCCAAGCTCGATCAAGCTACAGATGCTCGCCAATATTACTTTTGAC
TTCGCCGTTGGCTTGGTTCCATTTATCGGCGACCTTGCCGATGCCATGTTCAAGGCCAACACCCGTAACTGTCTT
CTATTAGAGCAGCACCTTCGTGAAAAGGGTAAGAAGGAGCTGCGAAAGAGCGGCCTGCCGATTCCGGCCATTGAC
CCCAGCAGTCCCGAGGAGTTTGATAGAGCGCAGCAGGAAAGCCCCCCTGGATACCACACAGATCCTGCGTCGCGC
CACGGATCGACCGCCGCCGCATCCCGGTTTGCTCATGTGAACCACATGCCGAGTGCTCCGGAAGAGGCCCGAGTT
CGGACAAGCGGCGGTGCCTGGTTCAGCCGCCACTTGTCTCGCCCTCACGACGTTGAGCTGGGTCCGGACGAGGAC
AGGCGCGGCAAAATACGCCGGCCAGATCCGCAGCAGCAGGGCCGCAGATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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