Protein ID | Hirsu2|5456 |
Gene name | |
Location | Contig_273:9274..9795 |
Strand | + |
Gene length (bp) | 521 |
Transcript length (bp) | 441 |
Coding sequence length (bp) | 441 |
Protein length (aa) | 147 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1927 | 0.0529 | 0.8609 | 0.0789 | 0.0627 | 0.0247 | 0.3696 | 0.373 | 0.3363 | 0.0037 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 7625 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|5456 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5456 MLLSFVRVFVFLATVDTALSLVIVGWPSWTKIPFWPPKADDFLQQSDVKESSPQEPTHVEDTQTEANEHITRNEF CSLRYTTQRNSTCDQILERNSLTLEKFLHMNPSLHGSCKELPAGTTVCVKTKVIVVDGSCWGKPDHIFDYC* |
Coding | >Hirsu2|5456 ATGTTGCTATCATTCGTCCGAGTCTTTGTTTTCCTAGCTACCGTTGACACAGCGCTCTCTCTCGTCATTGTCGGC TGGCCCTCATGGACCAAAATTCCTTTCTGGCCGCCCAAGGCAGATGATTTCTTGCAACAATCAGATGTCAAGGAG AGCTCGCCCCAAGAACCGACCCACGTGGAAGACACCCAGACGGAAGCGAATGAGCATATCACACGCAATGAATTC TGTTCGCTCAGGTACACGACCCAGCGCAACTCGACCTGCGACCAGATCCTAGAGCGGAACAGCCTAACGCTGGAG AAATTCCTCCACATGAACCCATCGCTGCATGGTAGTTGCAAGGAACTGCCTGCTGGCACGACCGTCTGCGTCAAG ACCAAGGTCATTGTCGTAGACGGCTCGTGTTGGGGGAAGCCGGACCATATTTTCGACTACTGTTAG |
Transcript | >Hirsu2|5456 ATGTTGCTATCATTCGTCCGAGTCTTTGTTTTCCTAGCTACCGTTGACACAGCGCTCTCTCTCGTCATTGTCGGC TGGCCCTCATGGACCAAAATTCCTTTCTGGCCGCCCAAGGCAGATGATTTCTTGCAACAATCAGATGTCAAGGAG AGCTCGCCCCAAGAACCGACCCACGTGGAAGACACCCAGACGGAAGCGAATGAGCATATCACACGCAATGAATTC TGTTCGCTCAGGTACACGACCCAGCGCAACTCGACCTGCGACCAGATCCTAGAGCGGAACAGCCTAACGCTGGAG AAATTCCTCCACATGAACCCATCGCTGCATGGTAGTTGCAAGGAACTGCCTGCTGGCACGACCGTCTGCGTCAAG ACCAAGGTCATTGTCGTAGACGGCTCGTGTTGGGGGAAGCCGGACCATATTTTCGACTACTGTTAG |
Gene | >Hirsu2|5456 ATGTTGCTATCATTCGTCCGAGTCTTTGTTTTCCTAGCTACCGTTGACACAGCGCTCTCTCTCGTCATTGTCGGC TGGCCCTCATGGACCAAAATTCCTTTCTGGCCGCCCAAGGCAGATGATTTCTTGCAACAATCAGATGTCAAGGAG AGCTCGCCCCAAGAACCGACCCACGTGGAAGACACCCAGACGGAAGCGAATGAGCATATCACACGCAATGAATTC TGTTCGCTCAGGTACACGACCCAGCGCAACTCGACCTGCGACCAGATCCTAGAGCGGAACAGCCTAACGCTGGAG AAATTCCTCCACATGGTGAGCCCCGCCTTCATGTTGACGGCGATGTGTGGTAGCAGCACGACGGGCCACGAAAAG CTGACCGAAAGCTTACCTAGAACCCATCGCTGCATGGTAGTTGCAAGGAACTGCCTGCTGGCACGACCGTCTGCG TCAAGACCAAGGTCATTGTCGTAGACGGCTCGTGTTGGGGGAAGCCGGACCATATTTTCGACTACTGTTAG |