Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5440
Gene name
LocationContig_272:24642..25079
Strand+
Gene length (bp)437
Transcript length (bp)369
Coding sequence length (bp)369
Protein length (aa) 123

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.3935 0.1543 0.8937 0.2012 0.2921 0.441 0.2737 0.2885 0.1639 0.1676

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup349
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2944
Ophiocordyceps australis map64 (Brazil) OphauB2|3435
Ophiocordyceps australis map64 (Brazil) OphauB2|3436
Ophiocordyceps camponoti-floridani Ophcf2|04676
Ophiocordyceps camponoti-floridani Ophcf2|04677
Ophiocordyceps camponoti-rufipedis Ophun1|4642
Ophiocordyceps kimflemingae Ophio5|5646
Ophiocordyceps kimflemingae Ophio5|5647
Ophiocordyceps subramaniannii Hirsu2|5440 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5440
MASPNATTLAHLVFLPPVCAVAYVPPALPPARQTIIMPLVVPGVTTAAADPLEEWRNKLVGKTLLAPESAETTSS
ETMFREHDLPRPYRVVWPGRLLTRDMDEGRLNVVVDEDRSVTNVWYG*
Coding >Hirsu2|5440
ATGGCCTCGCCCAACGCGACGACGCTAGCTCACCTCGTCTTCCTCCCGCCCGTCTGCGCCGTCGCCTACGTGCCG
CCCGCCCTTCCGCCCGCCCGCCAGACCATCATCATGCCGCTCGTCGTGCCCGGCGTCACGACCGCCGCCGCCGAC
CCGCTCGAGGAGTGGCGCAACAAGCTGGTCGGCAAGACGCTGCTGGCGCCCGAGTCCGCCGAGACCACGTCCAGC
GAGACGATGTTCCGCGAGCACGACCTGCCCCGGCCGTACCGCGTCGTCTGGCCCGGCCGGCTGCTGACCAGGGAC
ATGGACGAGGGCCGGCTGAACGTCGTTGTCGATGAGGACCGCTCCGTCACCAATGTCTGGTACGGGTAG
Transcript >Hirsu2|5440
ATGGCCTCGCCCAACGCGACGACGCTAGCTCACCTCGTCTTCCTCCCGCCCGTCTGCGCCGTCGCCTACGTGCCG
CCCGCCCTTCCGCCCGCCCGCCAGACCATCATCATGCCGCTCGTCGTGCCCGGCGTCACGACCGCCGCCGCCGAC
CCGCTCGAGGAGTGGCGCAACAAGCTGGTCGGCAAGACGCTGCTGGCGCCCGAGTCCGCCGAGACCACGTCCAGC
GAGACGATGTTCCGCGAGCACGACCTGCCCCGGCCGTACCGCGTCGTCTGGCCCGGCCGGCTGCTGACCAGGGAC
ATGGACGAGGGCCGGCTGAACGTCGTTGTCGATGAGGACCGCTCCGTCACCAATGTCTGGTACGGGTAG
Gene >Hirsu2|5440
ATGGCCTCGCCCAACGCGACGACGCTAGCTCACCTCGTCTTCCTCCCGCCCGTCTGCGCCGTCGCCTACGTGCCG
CCCGCCCTTCCGCCCGCCCGCCAGACCATCATCATGCCGCTCGTCGTGCCCGGCGTCACGACCGCCGCCGCCGAC
CCGCTCGAGGAGTGGCGCAACAAGCTGGTCGGCAAGACGCTGCTGGCGCCCGAGTCCGCCGAGACCACGTCCAGC
GAGACGGTGAGACGCGACGCTGCTGCTCCCGCGTTCGCCGCGTCATGGTGGCTGACGCGGCGTTTCTGGTCTAGA
TGTTCCGCGAGCACGACCTGCCCCGGCCGTACCGCGTCGTCTGGCCCGGCCGGCTGCTGACCAGGGACATGGACG
AGGGCCGGCTGAACGTCGTTGTCGATGAGGACCGCTCCGTCACCAATGTCTGGTACGGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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