Protein ID | Hirsu2|5440 |
Gene name | |
Location | Contig_272:24642..25079 |
Strand | + |
Gene length (bp) | 437 |
Transcript length (bp) | 369 |
Coding sequence length (bp) | 369 |
Protein length (aa) | 123 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.3935 | 0.1543 | 0.8937 | 0.2012 | 0.2921 | 0.441 | 0.2737 | 0.2885 | 0.1639 | 0.1676 |
Orthofinder run ID | 4 |
Orthogroup | 349 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5440 MASPNATTLAHLVFLPPVCAVAYVPPALPPARQTIIMPLVVPGVTTAAADPLEEWRNKLVGKTLLAPESAETTSS ETMFREHDLPRPYRVVWPGRLLTRDMDEGRLNVVVDEDRSVTNVWYG* |
Coding | >Hirsu2|5440 ATGGCCTCGCCCAACGCGACGACGCTAGCTCACCTCGTCTTCCTCCCGCCCGTCTGCGCCGTCGCCTACGTGCCG CCCGCCCTTCCGCCCGCCCGCCAGACCATCATCATGCCGCTCGTCGTGCCCGGCGTCACGACCGCCGCCGCCGAC CCGCTCGAGGAGTGGCGCAACAAGCTGGTCGGCAAGACGCTGCTGGCGCCCGAGTCCGCCGAGACCACGTCCAGC GAGACGATGTTCCGCGAGCACGACCTGCCCCGGCCGTACCGCGTCGTCTGGCCCGGCCGGCTGCTGACCAGGGAC ATGGACGAGGGCCGGCTGAACGTCGTTGTCGATGAGGACCGCTCCGTCACCAATGTCTGGTACGGGTAG |
Transcript | >Hirsu2|5440 ATGGCCTCGCCCAACGCGACGACGCTAGCTCACCTCGTCTTCCTCCCGCCCGTCTGCGCCGTCGCCTACGTGCCG CCCGCCCTTCCGCCCGCCCGCCAGACCATCATCATGCCGCTCGTCGTGCCCGGCGTCACGACCGCCGCCGCCGAC CCGCTCGAGGAGTGGCGCAACAAGCTGGTCGGCAAGACGCTGCTGGCGCCCGAGTCCGCCGAGACCACGTCCAGC GAGACGATGTTCCGCGAGCACGACCTGCCCCGGCCGTACCGCGTCGTCTGGCCCGGCCGGCTGCTGACCAGGGAC ATGGACGAGGGCCGGCTGAACGTCGTTGTCGATGAGGACCGCTCCGTCACCAATGTCTGGTACGGGTAG |
Gene | >Hirsu2|5440 ATGGCCTCGCCCAACGCGACGACGCTAGCTCACCTCGTCTTCCTCCCGCCCGTCTGCGCCGTCGCCTACGTGCCG CCCGCCCTTCCGCCCGCCCGCCAGACCATCATCATGCCGCTCGTCGTGCCCGGCGTCACGACCGCCGCCGCCGAC CCGCTCGAGGAGTGGCGCAACAAGCTGGTCGGCAAGACGCTGCTGGCGCCCGAGTCCGCCGAGACCACGTCCAGC GAGACGGTGAGACGCGACGCTGCTGCTCCCGCGTTCGCCGCGTCATGGTGGCTGACGCGGCGTTTCTGGTCTAGA TGTTCCGCGAGCACGACCTGCCCCGGCCGTACCGCGTCGTCTGGCCCGGCCGGCTGCTGACCAGGGACATGGACG AGGGCCGGCTGAACGTCGTTGTCGATGAGGACCGCTCCGTCACCAATGTCTGGTACGGGTAG |