© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5438 |
| Gene name | |
| Location | Contig_272:18796..20691 |
| Strand | - |
| Gene length (bp) | 1895 |
| Transcript length (bp) | 1521 |
| Coding sequence length (bp) | 1521 |
| Protein length (aa) | 507 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01522 | Polysacc_deac_1 | Polysaccharide deacetylase | 3.0E-18 | 119 | 261 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AM78|CDA_ARTBC | Chitin deacetylase ARB_04768 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04768 PE=3 SV=1 | 83 | 349 | 5.0E-29 |
| sp|D4B5F9|PGDA_ARTBC | Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 | 110 | 348 | 3.0E-26 |
| sp|P83513|XY11A_PSEXY | Bifunctional xylanase/deacetylase OS=Pseudobutyrivibrio xylanivorans GN=xyn11A PE=1 SV=2 | 124 | 336 | 5.0E-09 |
| sp|Q06703|CDA2_YEAST | Chitin deacetylase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDA2 PE=1 SV=1 | 119 | 271 | 2.0E-07 |
| sp|P04676|NODB_RHILT | Chitooligosaccharide deacetylase OS=Rhizobium leguminosarum bv. trifolii GN=nodB PE=3 SV=1 | 127 | 196 | 2.0E-06 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AM78|CDA_ARTBC | Chitin deacetylase ARB_04768 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04768 PE=3 SV=1 | 83 | 349 | 5.0E-29 |
| sp|D4B5F9|PGDA_ARTBC | Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 | 110 | 348 | 3.0E-26 |
| sp|P83513|XY11A_PSEXY | Bifunctional xylanase/deacetylase OS=Pseudobutyrivibrio xylanivorans GN=xyn11A PE=1 SV=2 | 124 | 336 | 5.0E-09 |
| sp|Q06703|CDA2_YEAST | Chitin deacetylase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDA2 PE=1 SV=1 | 119 | 271 | 2.0E-07 |
| sp|P04676|NODB_RHILT | Chitooligosaccharide deacetylase OS=Rhizobium leguminosarum bv. trifolii GN=nodB PE=3 SV=1 | 127 | 196 | 2.0E-06 |
| sp|P50355|NODB_RHISN | Chitooligosaccharide deacetylase OS=Rhizobium sp. (strain NGR234) GN=nodB PE=3 SV=2 | 127 | 196 | 2.0E-06 |
| sp|P02963|NODB_RHIME | Chitooligosaccharide deacetylase OS=Rhizobium meliloti (strain 1021) GN=nodB PE=3 SV=3 | 125 | 196 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 27 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5438 MKPTPGSRSLASLLVLGLARTIGGIALQTAREPAIEEVWCGWEKFLFILHKPRSCPPNHCCSGNGTCGTTGQHCG GGGCQVGLSDSCDAFYGPAGENTTDIPRPRIKGPVPYGNMIDKCSKPGLMALTFDDAPSKYTEELLNLLDELKAN VTFFVSGNSRSQGHVDDELKAWPGLLRRMHAAGHQIASSTWTHRDLDGTFGRWFLTYEPDRGLRARIRNSEVTFN EMVMRNVFGWFPAYIRPPGLGCGGRCQGFLRQRGYHVISTNFDMHDDKYDSAARIGEAKKKFSSDISKAADKNSY IVRLRDGYRQTVVNLTAHVVHEARARGYRLVTVGECVGDPKRYWYRPTKEPDMNRSAPAPLLAARAPVVEEELPP WPPFSIWDIVNKTRPKSPGGGPWLDPAQRPRCGPKYGLRCMGSKEAPCCSYWGICGSEPEYCGTGCRESYGTCDV TSGMSLENSTNGLCGVEFNAGCSADAKRPCCSEAGMCGSGPTSCGRGCQADYGDCM* |
| Coding | >Hirsu2|5438 ATGAAGCCGACGCCGGGCAGCAGAAGCCTCGCCAGCCTCTTGGTCCTCGGCCTCGCTCGCACAATAGGCGGAATC GCACTGCAGACGGCACGCGAGCCAGCCATCGAGGAAGTCTGGTGCGGCTGGGAAAAATTCCTCTTCATCTTGCAC AAACCCCGGAGCTGTCCACCCAACCATTGCTGTTCAGGGAATGGAACCTGCGGCACGACAGGCCAACACTGCGGT GGCGGGGGGTGCCAGGTAGGCCTCAGCGACTCGTGCGATGCCTTCTACGGCCCCGCGGGCGAGAATACCACAGAC ATCCCGCGGCCACGGATCAAGGGACCTGTTCCTTACGGCAACATGATAGATAAATGCTCGAAGCCGGGCCTCATG GCCCTGACCTTCGACGACGCACCGAGCAAATACACGGAAGAGCTGCTGAACCTCCTGGACGAGCTCAAGGCCAAC GTCACCTTCTTCGTCTCGGGCAACAGCCGGTCCCAGGGCCATGTCGACGACGAGCTGAAGGCCTGGCCCGGCCTC CTGCGGCGCATGCACGCGGCCGGGCACCAGATTGCGAGCAGCACCTGGACCCACCGTGACCTGGACGGGACCTTC GGCCGGTGGTTTCTGACGTACGAGCCGGACCGGGGGCTCCGGGCGCGGATCCGGAACTCGGAGGTCACGTTCAAC GAGATGGTCATGCGGAACGTCTTCGGCTGGTTCCCGGCCTACATCCGACCGCCGGGCCTGGGCTGCGGGGGGCGG TGCCAGGGCTTCTTGCGCCAGCGGGGCTACCACGTCATCTCGACCAACTTCGACATGCACGACGACAAGTACGAC AGCGCGGCCCGGATCGGAGAGGCCAAGAAGAAGTTCAGCAGCGACATCTCGAAGGCGGCCGACAAGAACAGCTAC ATCGTGCGGCTCCGCGACGGGTACCGCCAGACGGTCGTCAACCTCACGGCCCACGTGGTGCACGAGGCGAGGGCG CGCGGCTACCGGCTCGTGACGGTGGGCGAGTGCGTCGGCGACCCCAAGCGGTACTGGTACCGGCCGACCAAGGAG CCGGACATGAACCGATCGGCGCCGGCGCCGCTGCTGGCCGCCCGGGCCCCCGTCGTCGAGGAGGAGCTGCCGCCG TGGCCCCCCTTTTCGATCTGGGACATTGTGAACAAGACGAGGCCGAAGTCGCCCGGGGGCGGGCCCTGGCTCGAC CCTGCTCAGCGGCCACGCTGCGGCCCAAAATACGGACTACGGTGCATGGGCTCGAAAGAGGCGCCCTGCTGCTCC TACTGGGGCATCTGCGGCTCGGAGCCCGAGTACTGCGGCACCGGGTGCAGAGAGTCGTACGGCACGTGCGACGTC ACGTCGGGCATGAGCCTGGAGAACTCGACCAACGGGCTGTGCGGCGTCGAGTTCAACGCCGGCTGCTCGGCCGAC GCGAAGAGGCCATGCTGCTCGGAGGCCGGAATGTGCGGTTCCGGGCCAACCTCGTGCGGCCGCGGCTGCCAAGCG GACTACGGGGACTGCATGTAA |
| Transcript | >Hirsu2|5438 ATGAAGCCGACGCCGGGCAGCAGAAGCCTCGCCAGCCTCTTGGTCCTCGGCCTCGCTCGCACAATAGGCGGAATC GCACTGCAGACGGCACGCGAGCCAGCCATCGAGGAAGTCTGGTGCGGCTGGGAAAAATTCCTCTTCATCTTGCAC AAACCCCGGAGCTGTCCACCCAACCATTGCTGTTCAGGGAATGGAACCTGCGGCACGACAGGCCAACACTGCGGT GGCGGGGGGTGCCAGGTAGGCCTCAGCGACTCGTGCGATGCCTTCTACGGCCCCGCGGGCGAGAATACCACAGAC ATCCCGCGGCCACGGATCAAGGGACCTGTTCCTTACGGCAACATGATAGATAAATGCTCGAAGCCGGGCCTCATG GCCCTGACCTTCGACGACGCACCGAGCAAATACACGGAAGAGCTGCTGAACCTCCTGGACGAGCTCAAGGCCAAC GTCACCTTCTTCGTCTCGGGCAACAGCCGGTCCCAGGGCCATGTCGACGACGAGCTGAAGGCCTGGCCCGGCCTC CTGCGGCGCATGCACGCGGCCGGGCACCAGATTGCGAGCAGCACCTGGACCCACCGTGACCTGGACGGGACCTTC GGCCGGTGGTTTCTGACGTACGAGCCGGACCGGGGGCTCCGGGCGCGGATCCGGAACTCGGAGGTCACGTTCAAC GAGATGGTCATGCGGAACGTCTTCGGCTGGTTCCCGGCCTACATCCGACCGCCGGGCCTGGGCTGCGGGGGGCGG TGCCAGGGCTTCTTGCGCCAGCGGGGCTACCACGTCATCTCGACCAACTTCGACATGCACGACGACAAGTACGAC AGCGCGGCCCGGATCGGAGAGGCCAAGAAGAAGTTCAGCAGCGACATCTCGAAGGCGGCCGACAAGAACAGCTAC ATCGTGCGGCTCCGCGACGGGTACCGCCAGACGGTCGTCAACCTCACGGCCCACGTGGTGCACGAGGCGAGGGCG CGCGGCTACCGGCTCGTGACGGTGGGCGAGTGCGTCGGCGACCCCAAGCGGTACTGGTACCGGCCGACCAAGGAG CCGGACATGAACCGATCGGCGCCGGCGCCGCTGCTGGCCGCCCGGGCCCCCGTCGTCGAGGAGGAGCTGCCGCCG TGGCCCCCCTTTTCGATCTGGGACATTGTGAACAAGACGAGGCCGAAGTCGCCCGGGGGCGGGCCCTGGCTCGAC CCTGCTCAGCGGCCACGCTGCGGCCCAAAATACGGACTACGGTGCATGGGCTCGAAAGAGGCGCCCTGCTGCTCC TACTGGGGCATCTGCGGCTCGGAGCCCGAGTACTGCGGCACCGGGTGCAGAGAGTCGTACGGCACGTGCGACGTC ACGTCGGGCATGAGCCTGGAGAACTCGACCAACGGGCTGTGCGGCGTCGAGTTCAACGCCGGCTGCTCGGCCGAC GCGAAGAGGCCATGCTGCTCGGAGGCCGGAATGTGCGGTTCCGGGCCAACCTCGTGCGGCCGCGGCTGCCAAGCG GACTACGGGGACTGCATGTAA |
| Gene | >Hirsu2|5438 ATGAAGCCGACGCCGGGCAGCAGAAGCCTCGCCAGCCTCTTGGTCCTCGGCCTCGCTCGCACAATAGGCGGAATC GCACTGCAGACGGCACGCGAGCCAGCCATCGAGGAAGTCTGGTGCGGCTGGGAAAAATTCCTCTTCATCTTGCAC AAACCCCGGAGCTGTCCACCCAACCATTGCTGTTCAGGGAATGGAACCTGCGGCACGACAGGCCAACACTGCGGT GGCGGGGGGTGCCAGGTAGGCCTCAGCGACTCGTGCGATGCCTTGTAAGTAGCGTTGTCTGGTGTCGCGTTCCAG TCAGATGACTGACGGTCCGTTGGACTTCCAGCTACGGCCCCGCGGGCGAGAATACCACAGACATCCCGCGGCCAC GGATCAAGGGACCTGTTCCTTACGGTACGCACCTCGCCGAGGCCCGGCACGCGGATCGGCGTCCAGGGCCGCAAG GGCGACTGCCCTCTGCTTAGACTCGGCGGCTGACACCAGAATACACAGGCAACATGATAGATAAATGCTCGAAGC CGGGCCTCATGGCCCTGACCTTCGACGACGCACCGAGCAAATACACGGAAGAGCTGCTGAACCTCCTGGACGAGC TCAAGGCCAACGTCACCTTCTTCGTCTCGGGCAACAGCCGGTCCCAGGGCCATGTCGACGACGAGCTGAAGGCCT GGCCCGGCCTCCTGCGGCGCATGCACGCGGCCGGGCACCAGATTGCGAGCAGCACCTGGACCCACCGTGACCTGG ACGGGACCTTCGGCCGGTGGTTTCTGACGTACGAGCCGGACCGGGGGCTCCGGGCGCGGATCCGGAACTCGGAGG TCACGTTCAACGAGATGGTCATGCGGAACGTCTTCGGCTGGTTCCCGGCCTACATCCGACCGCCGGGCCTGGGCT GCGGGGGGCGGTGCCAGGGCTTCTTGCGCCAGCGGGGCTACCACGTCATCTCGACCAACTTCGACATGCACGACG ACAAGTACGACAGCGCGGCCCGGATCGGAGAGGCCAAGAAGAAGTTCAGCAGCGACATCTCGAAGGCGGCCGACA AGAACAGCTACATCGTGCGGCTCCGCGACGGGTACCGCCAGACGGTCGTCAACCTCACGGCCCACGTGGTGCACG AGGCGAGGGCGCGCGGCTACCGGCTCGTGACGGTGGGCGAGTGCGTCGGCGACCCCAAGCGGTACTGGTACCGGC CGACCAAGGAGCCGGACATGAACCGATCGGCGCCGGCGCCGCTGCTGGCCGCCCGGGCCCCCGTCGTCGAGGAGG AGCTGCCGCCGTGGCCCCCCTTTTCGATCTGGGACATTGTGAACAAGACGAGGCCGAAGTCGCCCGGGGGCGGGC CCTGGCTCGACCCTGCTCAGCGGCCACGCTGCGGCCCAAAATACGGACTACGGTGCATGGGCTCGAAAGAGGCGC CCTGCTGCTCCTACTGGGGCATCTGGTAAGCAGGCCATCGCCCCCTCCCCTTGAAATCGTGGAACGGGACGCCGT CTTCTTCGGAACCCTCTTCCCAGCCGCAGACGTGCCCGACTCGCGCGGACGAGCCCGCTGACGCTTCCTCTCACG CACGCACAAGCGGCTCGGAGCCCGAGTACTGCGGCACCGGGTGCAGAGAGTCGTACGGCACGTGCGACGTCACGT CGGGCATGAGCCTGGAGAACTCGACCAACGGGCTGTGCGGCGTCGAGTTCAACGCCGGCTGCTCGGCCGACGCGA AGAGGCCATGCTGCTCGGAGGCCGGAATGTGGTAAGTCGCACCAGACAGCACCAAGACTCGCCGACGCCTGCTGA CTCGCCGACCTCTCTCTCCCTCTCTCTCCGCCAGCGGTTCCGGGCCAACCTCGTGCGGCCGCGGCTGCCAAGCGG ACTACGGGGACTGCATGTAA |