Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5438
Gene name
LocationContig_272:18796..20691
Strand-
Gene length (bp)1895
Transcript length (bp)1521
Coding sequence length (bp)1521
Protein length (aa) 507

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01522 Polysacc_deac_1 Polysaccharide deacetylase 3.0E-18 119 261

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D4AM78|CDA_ARTBC Chitin deacetylase ARB_04768 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04768 PE=3 SV=1 83 349 5.0E-29
sp|D4B5F9|PGDA_ARTBC Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 110 348 3.0E-26
sp|P83513|XY11A_PSEXY Bifunctional xylanase/deacetylase OS=Pseudobutyrivibrio xylanivorans GN=xyn11A PE=1 SV=2 124 336 5.0E-09
sp|Q06703|CDA2_YEAST Chitin deacetylase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDA2 PE=1 SV=1 119 271 2.0E-07
sp|P04676|NODB_RHILT Chitooligosaccharide deacetylase OS=Rhizobium leguminosarum bv. trifolii GN=nodB PE=3 SV=1 127 196 2.0E-06
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Swissprot ID Swissprot Description Start End E-value
sp|D4AM78|CDA_ARTBC Chitin deacetylase ARB_04768 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04768 PE=3 SV=1 83 349 5.0E-29
sp|D4B5F9|PGDA_ARTBC Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 110 348 3.0E-26
sp|P83513|XY11A_PSEXY Bifunctional xylanase/deacetylase OS=Pseudobutyrivibrio xylanivorans GN=xyn11A PE=1 SV=2 124 336 5.0E-09
sp|Q06703|CDA2_YEAST Chitin deacetylase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDA2 PE=1 SV=1 119 271 2.0E-07
sp|P04676|NODB_RHILT Chitooligosaccharide deacetylase OS=Rhizobium leguminosarum bv. trifolii GN=nodB PE=3 SV=1 127 196 2.0E-06
sp|P50355|NODB_RHISN Chitooligosaccharide deacetylase OS=Rhizobium sp. (strain NGR234) GN=nodB PE=3 SV=2 127 196 2.0E-06
sp|P02963|NODB_RHIME Chitooligosaccharide deacetylase OS=Rhizobium meliloti (strain 1021) GN=nodB PE=3 SV=3 125 196 3.0E-06
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GO

GO Term Description Terminal node
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0071704 organic substance metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0008150 biological_process No
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1195 0.0533 0.9577 0.1058 0.089 0.0595 0.2295 0.189 0.283 0.0056

SignalP

SignalP signal predicted Location Score
Yes 1 - 24 0.572343

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
CE4 3.2E-21 121 265

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup88
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3130
Ophiocordyceps australis 1348a (Ghana) OphauG2|438
Ophiocordyceps australis map64 (Brazil) OphauB2|1465
Ophiocordyceps australis map64 (Brazil) OphauB2|230
Ophiocordyceps camponoti-floridani Ophcf2|03614
Ophiocordyceps camponoti-floridani Ophcf2|06957
Ophiocordyceps camponoti-floridani Ophcf2|05927
Ophiocordyceps camponoti-rufipedis Ophun1|481
Ophiocordyceps camponoti-rufipedis Ophun1|6139
Ophiocordyceps camponoti-rufipedis Ophun1|5221
Ophiocordyceps kimflemingae Ophio5|24
Ophiocordyceps kimflemingae Ophio5|7553
Ophiocordyceps kimflemingae Ophio5|7800
Ophiocordyceps subramaniannii Hirsu2|960
Ophiocordyceps subramaniannii Hirsu2|5438 (this protein)
Ophiocordyceps subramaniannii Hirsu2|3901
Ophiocordyceps subramaniannii Hirsu2|3201

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5438
MKPTPGSRSLASLLVLGLARTIGGIALQTAREPAIEEVWCGWEKFLFILHKPRSCPPNHCCSGNGTCGTTGQHCG
GGGCQVGLSDSCDAFYGPAGENTTDIPRPRIKGPVPYGNMIDKCSKPGLMALTFDDAPSKYTEELLNLLDELKAN
VTFFVSGNSRSQGHVDDELKAWPGLLRRMHAAGHQIASSTWTHRDLDGTFGRWFLTYEPDRGLRARIRNSEVTFN
EMVMRNVFGWFPAYIRPPGLGCGGRCQGFLRQRGYHVISTNFDMHDDKYDSAARIGEAKKKFSSDISKAADKNSY
IVRLRDGYRQTVVNLTAHVVHEARARGYRLVTVGECVGDPKRYWYRPTKEPDMNRSAPAPLLAARAPVVEEELPP
WPPFSIWDIVNKTRPKSPGGGPWLDPAQRPRCGPKYGLRCMGSKEAPCCSYWGICGSEPEYCGTGCRESYGTCDV
TSGMSLENSTNGLCGVEFNAGCSADAKRPCCSEAGMCGSGPTSCGRGCQADYGDCM*
Coding >Hirsu2|5438
ATGAAGCCGACGCCGGGCAGCAGAAGCCTCGCCAGCCTCTTGGTCCTCGGCCTCGCTCGCACAATAGGCGGAATC
GCACTGCAGACGGCACGCGAGCCAGCCATCGAGGAAGTCTGGTGCGGCTGGGAAAAATTCCTCTTCATCTTGCAC
AAACCCCGGAGCTGTCCACCCAACCATTGCTGTTCAGGGAATGGAACCTGCGGCACGACAGGCCAACACTGCGGT
GGCGGGGGGTGCCAGGTAGGCCTCAGCGACTCGTGCGATGCCTTCTACGGCCCCGCGGGCGAGAATACCACAGAC
ATCCCGCGGCCACGGATCAAGGGACCTGTTCCTTACGGCAACATGATAGATAAATGCTCGAAGCCGGGCCTCATG
GCCCTGACCTTCGACGACGCACCGAGCAAATACACGGAAGAGCTGCTGAACCTCCTGGACGAGCTCAAGGCCAAC
GTCACCTTCTTCGTCTCGGGCAACAGCCGGTCCCAGGGCCATGTCGACGACGAGCTGAAGGCCTGGCCCGGCCTC
CTGCGGCGCATGCACGCGGCCGGGCACCAGATTGCGAGCAGCACCTGGACCCACCGTGACCTGGACGGGACCTTC
GGCCGGTGGTTTCTGACGTACGAGCCGGACCGGGGGCTCCGGGCGCGGATCCGGAACTCGGAGGTCACGTTCAAC
GAGATGGTCATGCGGAACGTCTTCGGCTGGTTCCCGGCCTACATCCGACCGCCGGGCCTGGGCTGCGGGGGGCGG
TGCCAGGGCTTCTTGCGCCAGCGGGGCTACCACGTCATCTCGACCAACTTCGACATGCACGACGACAAGTACGAC
AGCGCGGCCCGGATCGGAGAGGCCAAGAAGAAGTTCAGCAGCGACATCTCGAAGGCGGCCGACAAGAACAGCTAC
ATCGTGCGGCTCCGCGACGGGTACCGCCAGACGGTCGTCAACCTCACGGCCCACGTGGTGCACGAGGCGAGGGCG
CGCGGCTACCGGCTCGTGACGGTGGGCGAGTGCGTCGGCGACCCCAAGCGGTACTGGTACCGGCCGACCAAGGAG
CCGGACATGAACCGATCGGCGCCGGCGCCGCTGCTGGCCGCCCGGGCCCCCGTCGTCGAGGAGGAGCTGCCGCCG
TGGCCCCCCTTTTCGATCTGGGACATTGTGAACAAGACGAGGCCGAAGTCGCCCGGGGGCGGGCCCTGGCTCGAC
CCTGCTCAGCGGCCACGCTGCGGCCCAAAATACGGACTACGGTGCATGGGCTCGAAAGAGGCGCCCTGCTGCTCC
TACTGGGGCATCTGCGGCTCGGAGCCCGAGTACTGCGGCACCGGGTGCAGAGAGTCGTACGGCACGTGCGACGTC
ACGTCGGGCATGAGCCTGGAGAACTCGACCAACGGGCTGTGCGGCGTCGAGTTCAACGCCGGCTGCTCGGCCGAC
GCGAAGAGGCCATGCTGCTCGGAGGCCGGAATGTGCGGTTCCGGGCCAACCTCGTGCGGCCGCGGCTGCCAAGCG
GACTACGGGGACTGCATGTAA
Transcript >Hirsu2|5438
ATGAAGCCGACGCCGGGCAGCAGAAGCCTCGCCAGCCTCTTGGTCCTCGGCCTCGCTCGCACAATAGGCGGAATC
GCACTGCAGACGGCACGCGAGCCAGCCATCGAGGAAGTCTGGTGCGGCTGGGAAAAATTCCTCTTCATCTTGCAC
AAACCCCGGAGCTGTCCACCCAACCATTGCTGTTCAGGGAATGGAACCTGCGGCACGACAGGCCAACACTGCGGT
GGCGGGGGGTGCCAGGTAGGCCTCAGCGACTCGTGCGATGCCTTCTACGGCCCCGCGGGCGAGAATACCACAGAC
ATCCCGCGGCCACGGATCAAGGGACCTGTTCCTTACGGCAACATGATAGATAAATGCTCGAAGCCGGGCCTCATG
GCCCTGACCTTCGACGACGCACCGAGCAAATACACGGAAGAGCTGCTGAACCTCCTGGACGAGCTCAAGGCCAAC
GTCACCTTCTTCGTCTCGGGCAACAGCCGGTCCCAGGGCCATGTCGACGACGAGCTGAAGGCCTGGCCCGGCCTC
CTGCGGCGCATGCACGCGGCCGGGCACCAGATTGCGAGCAGCACCTGGACCCACCGTGACCTGGACGGGACCTTC
GGCCGGTGGTTTCTGACGTACGAGCCGGACCGGGGGCTCCGGGCGCGGATCCGGAACTCGGAGGTCACGTTCAAC
GAGATGGTCATGCGGAACGTCTTCGGCTGGTTCCCGGCCTACATCCGACCGCCGGGCCTGGGCTGCGGGGGGCGG
TGCCAGGGCTTCTTGCGCCAGCGGGGCTACCACGTCATCTCGACCAACTTCGACATGCACGACGACAAGTACGAC
AGCGCGGCCCGGATCGGAGAGGCCAAGAAGAAGTTCAGCAGCGACATCTCGAAGGCGGCCGACAAGAACAGCTAC
ATCGTGCGGCTCCGCGACGGGTACCGCCAGACGGTCGTCAACCTCACGGCCCACGTGGTGCACGAGGCGAGGGCG
CGCGGCTACCGGCTCGTGACGGTGGGCGAGTGCGTCGGCGACCCCAAGCGGTACTGGTACCGGCCGACCAAGGAG
CCGGACATGAACCGATCGGCGCCGGCGCCGCTGCTGGCCGCCCGGGCCCCCGTCGTCGAGGAGGAGCTGCCGCCG
TGGCCCCCCTTTTCGATCTGGGACATTGTGAACAAGACGAGGCCGAAGTCGCCCGGGGGCGGGCCCTGGCTCGAC
CCTGCTCAGCGGCCACGCTGCGGCCCAAAATACGGACTACGGTGCATGGGCTCGAAAGAGGCGCCCTGCTGCTCC
TACTGGGGCATCTGCGGCTCGGAGCCCGAGTACTGCGGCACCGGGTGCAGAGAGTCGTACGGCACGTGCGACGTC
ACGTCGGGCATGAGCCTGGAGAACTCGACCAACGGGCTGTGCGGCGTCGAGTTCAACGCCGGCTGCTCGGCCGAC
GCGAAGAGGCCATGCTGCTCGGAGGCCGGAATGTGCGGTTCCGGGCCAACCTCGTGCGGCCGCGGCTGCCAAGCG
GACTACGGGGACTGCATGTAA
Gene >Hirsu2|5438
ATGAAGCCGACGCCGGGCAGCAGAAGCCTCGCCAGCCTCTTGGTCCTCGGCCTCGCTCGCACAATAGGCGGAATC
GCACTGCAGACGGCACGCGAGCCAGCCATCGAGGAAGTCTGGTGCGGCTGGGAAAAATTCCTCTTCATCTTGCAC
AAACCCCGGAGCTGTCCACCCAACCATTGCTGTTCAGGGAATGGAACCTGCGGCACGACAGGCCAACACTGCGGT
GGCGGGGGGTGCCAGGTAGGCCTCAGCGACTCGTGCGATGCCTTGTAAGTAGCGTTGTCTGGTGTCGCGTTCCAG
TCAGATGACTGACGGTCCGTTGGACTTCCAGCTACGGCCCCGCGGGCGAGAATACCACAGACATCCCGCGGCCAC
GGATCAAGGGACCTGTTCCTTACGGTACGCACCTCGCCGAGGCCCGGCACGCGGATCGGCGTCCAGGGCCGCAAG
GGCGACTGCCCTCTGCTTAGACTCGGCGGCTGACACCAGAATACACAGGCAACATGATAGATAAATGCTCGAAGC
CGGGCCTCATGGCCCTGACCTTCGACGACGCACCGAGCAAATACACGGAAGAGCTGCTGAACCTCCTGGACGAGC
TCAAGGCCAACGTCACCTTCTTCGTCTCGGGCAACAGCCGGTCCCAGGGCCATGTCGACGACGAGCTGAAGGCCT
GGCCCGGCCTCCTGCGGCGCATGCACGCGGCCGGGCACCAGATTGCGAGCAGCACCTGGACCCACCGTGACCTGG
ACGGGACCTTCGGCCGGTGGTTTCTGACGTACGAGCCGGACCGGGGGCTCCGGGCGCGGATCCGGAACTCGGAGG
TCACGTTCAACGAGATGGTCATGCGGAACGTCTTCGGCTGGTTCCCGGCCTACATCCGACCGCCGGGCCTGGGCT
GCGGGGGGCGGTGCCAGGGCTTCTTGCGCCAGCGGGGCTACCACGTCATCTCGACCAACTTCGACATGCACGACG
ACAAGTACGACAGCGCGGCCCGGATCGGAGAGGCCAAGAAGAAGTTCAGCAGCGACATCTCGAAGGCGGCCGACA
AGAACAGCTACATCGTGCGGCTCCGCGACGGGTACCGCCAGACGGTCGTCAACCTCACGGCCCACGTGGTGCACG
AGGCGAGGGCGCGCGGCTACCGGCTCGTGACGGTGGGCGAGTGCGTCGGCGACCCCAAGCGGTACTGGTACCGGC
CGACCAAGGAGCCGGACATGAACCGATCGGCGCCGGCGCCGCTGCTGGCCGCCCGGGCCCCCGTCGTCGAGGAGG
AGCTGCCGCCGTGGCCCCCCTTTTCGATCTGGGACATTGTGAACAAGACGAGGCCGAAGTCGCCCGGGGGCGGGC
CCTGGCTCGACCCTGCTCAGCGGCCACGCTGCGGCCCAAAATACGGACTACGGTGCATGGGCTCGAAAGAGGCGC
CCTGCTGCTCCTACTGGGGCATCTGGTAAGCAGGCCATCGCCCCCTCCCCTTGAAATCGTGGAACGGGACGCCGT
CTTCTTCGGAACCCTCTTCCCAGCCGCAGACGTGCCCGACTCGCGCGGACGAGCCCGCTGACGCTTCCTCTCACG
CACGCACAAGCGGCTCGGAGCCCGAGTACTGCGGCACCGGGTGCAGAGAGTCGTACGGCACGTGCGACGTCACGT
CGGGCATGAGCCTGGAGAACTCGACCAACGGGCTGTGCGGCGTCGAGTTCAACGCCGGCTGCTCGGCCGACGCGA
AGAGGCCATGCTGCTCGGAGGCCGGAATGTGGTAAGTCGCACCAGACAGCACCAAGACTCGCCGACGCCTGCTGA
CTCGCCGACCTCTCTCTCCCTCTCTCTCCGCCAGCGGTTCCGGGCCAACCTCGTGCGGCCGCGGCTGCCAAGCGG
ACTACGGGGACTGCATGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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