Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5438
Gene name
LocationContig_272:18796..20691
Strand-
Gene length (bp)1895
Transcript length (bp)1521
Coding sequence length (bp)1521
Protein length (aa) 507

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01522 Polysacc_deac_1 Polysaccharide deacetylase 3.0E-18 119 261

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D4AM78|CDA_ARTBC Chitin deacetylase ARB_04768 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04768 PE=3 SV=1 83 349 5.0E-29
sp|D4B5F9|PGDA_ARTBC Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 110 348 3.0E-26
sp|P83513|XY11A_PSEXY Bifunctional xylanase/deacetylase OS=Pseudobutyrivibrio xylanivorans GN=xyn11A PE=1 SV=2 124 336 5.0E-09
sp|Q06703|CDA2_YEAST Chitin deacetylase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDA2 PE=1 SV=1 119 271 2.0E-07
sp|P04676|NODB_RHILT Chitooligosaccharide deacetylase OS=Rhizobium leguminosarum bv. trifolii GN=nodB PE=3 SV=1 127 196 2.0E-06
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Swissprot ID Swissprot Description Start End E-value
sp|D4AM78|CDA_ARTBC Chitin deacetylase ARB_04768 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04768 PE=3 SV=1 83 349 5.0E-29
sp|D4B5F9|PGDA_ARTBC Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 110 348 3.0E-26
sp|P83513|XY11A_PSEXY Bifunctional xylanase/deacetylase OS=Pseudobutyrivibrio xylanivorans GN=xyn11A PE=1 SV=2 124 336 5.0E-09
sp|Q06703|CDA2_YEAST Chitin deacetylase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDA2 PE=1 SV=1 119 271 2.0E-07
sp|P04676|NODB_RHILT Chitooligosaccharide deacetylase OS=Rhizobium leguminosarum bv. trifolii GN=nodB PE=3 SV=1 127 196 2.0E-06
sp|P50355|NODB_RHISN Chitooligosaccharide deacetylase OS=Rhizobium sp. (strain NGR234) GN=nodB PE=3 SV=2 127 196 2.0E-06
sp|P02963|NODB_RHIME Chitooligosaccharide deacetylase OS=Rhizobium meliloti (strain 1021) GN=nodB PE=3 SV=3 125 196 3.0E-06
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GO

GO Term Description Terminal node
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0071704 organic substance metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0008150 biological_process No
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5438
MKPTPGSRSLASLLVLGLARTIGGIALQTAREPAIEEVWCGWEKFLFILHKPRSCPPNHCCSGNGTCGTTGQHCG
GGGCQVGLSDSCDAFYGPAGENTTDIPRPRIKGPVPYGNMIDKCSKPGLMALTFDDAPSKYTEELLNLLDELKAN
VTFFVSGNSRSQGHVDDELKAWPGLLRRMHAAGHQIASSTWTHRDLDGTFGRWFLTYEPDRGLRARIRNSEVTFN
EMVMRNVFGWFPAYIRPPGLGCGGRCQGFLRQRGYHVISTNFDMHDDKYDSAARIGEAKKKFSSDISKAADKNSY
IVRLRDGYRQTVVNLTAHVVHEARARGYRLVTVGECVGDPKRYWYRPTKEPDMNRSAPAPLLAARAPVVEEELPP
WPPFSIWDIVNKTRPKSPGGGPWLDPAQRPRCGPKYGLRCMGSKEAPCCSYWGICGSEPEYCGTGCRESYGTCDV
TSGMSLENSTNGLCGVEFNAGCSADAKRPCCSEAGMCGSGPTSCGRGCQADYGDCM*
Coding >Hirsu2|5438
ATGAAGCCGACGCCGGGCAGCAGAAGCCTCGCCAGCCTCTTGGTCCTCGGCCTCGCTCGCACAATAGGCGGAATC
GCACTGCAGACGGCACGCGAGCCAGCCATCGAGGAAGTCTGGTGCGGCTGGGAAAAATTCCTCTTCATCTTGCAC
AAACCCCGGAGCTGTCCACCCAACCATTGCTGTTCAGGGAATGGAACCTGCGGCACGACAGGCCAACACTGCGGT
GGCGGGGGGTGCCAGGTAGGCCTCAGCGACTCGTGCGATGCCTTCTACGGCCCCGCGGGCGAGAATACCACAGAC
ATCCCGCGGCCACGGATCAAGGGACCTGTTCCTTACGGCAACATGATAGATAAATGCTCGAAGCCGGGCCTCATG
GCCCTGACCTTCGACGACGCACCGAGCAAATACACGGAAGAGCTGCTGAACCTCCTGGACGAGCTCAAGGCCAAC
GTCACCTTCTTCGTCTCGGGCAACAGCCGGTCCCAGGGCCATGTCGACGACGAGCTGAAGGCCTGGCCCGGCCTC
CTGCGGCGCATGCACGCGGCCGGGCACCAGATTGCGAGCAGCACCTGGACCCACCGTGACCTGGACGGGACCTTC
GGCCGGTGGTTTCTGACGTACGAGCCGGACCGGGGGCTCCGGGCGCGGATCCGGAACTCGGAGGTCACGTTCAAC
GAGATGGTCATGCGGAACGTCTTCGGCTGGTTCCCGGCCTACATCCGACCGCCGGGCCTGGGCTGCGGGGGGCGG
TGCCAGGGCTTCTTGCGCCAGCGGGGCTACCACGTCATCTCGACCAACTTCGACATGCACGACGACAAGTACGAC
AGCGCGGCCCGGATCGGAGAGGCCAAGAAGAAGTTCAGCAGCGACATCTCGAAGGCGGCCGACAAGAACAGCTAC
ATCGTGCGGCTCCGCGACGGGTACCGCCAGACGGTCGTCAACCTCACGGCCCACGTGGTGCACGAGGCGAGGGCG
CGCGGCTACCGGCTCGTGACGGTGGGCGAGTGCGTCGGCGACCCCAAGCGGTACTGGTACCGGCCGACCAAGGAG
CCGGACATGAACCGATCGGCGCCGGCGCCGCTGCTGGCCGCCCGGGCCCCCGTCGTCGAGGAGGAGCTGCCGCCG
TGGCCCCCCTTTTCGATCTGGGACATTGTGAACAAGACGAGGCCGAAGTCGCCCGGGGGCGGGCCCTGGCTCGAC
CCTGCTCAGCGGCCACGCTGCGGCCCAAAATACGGACTACGGTGCATGGGCTCGAAAGAGGCGCCCTGCTGCTCC
TACTGGGGCATCTGCGGCTCGGAGCCCGAGTACTGCGGCACCGGGTGCAGAGAGTCGTACGGCACGTGCGACGTC
ACGTCGGGCATGAGCCTGGAGAACTCGACCAACGGGCTGTGCGGCGTCGAGTTCAACGCCGGCTGCTCGGCCGAC
GCGAAGAGGCCATGCTGCTCGGAGGCCGGAATGTGCGGTTCCGGGCCAACCTCGTGCGGCCGCGGCTGCCAAGCG
GACTACGGGGACTGCATGTAA
Transcript >Hirsu2|5438
ATGAAGCCGACGCCGGGCAGCAGAAGCCTCGCCAGCCTCTTGGTCCTCGGCCTCGCTCGCACAATAGGCGGAATC
GCACTGCAGACGGCACGCGAGCCAGCCATCGAGGAAGTCTGGTGCGGCTGGGAAAAATTCCTCTTCATCTTGCAC
AAACCCCGGAGCTGTCCACCCAACCATTGCTGTTCAGGGAATGGAACCTGCGGCACGACAGGCCAACACTGCGGT
GGCGGGGGGTGCCAGGTAGGCCTCAGCGACTCGTGCGATGCCTTCTACGGCCCCGCGGGCGAGAATACCACAGAC
ATCCCGCGGCCACGGATCAAGGGACCTGTTCCTTACGGCAACATGATAGATAAATGCTCGAAGCCGGGCCTCATG
GCCCTGACCTTCGACGACGCACCGAGCAAATACACGGAAGAGCTGCTGAACCTCCTGGACGAGCTCAAGGCCAAC
GTCACCTTCTTCGTCTCGGGCAACAGCCGGTCCCAGGGCCATGTCGACGACGAGCTGAAGGCCTGGCCCGGCCTC
CTGCGGCGCATGCACGCGGCCGGGCACCAGATTGCGAGCAGCACCTGGACCCACCGTGACCTGGACGGGACCTTC
GGCCGGTGGTTTCTGACGTACGAGCCGGACCGGGGGCTCCGGGCGCGGATCCGGAACTCGGAGGTCACGTTCAAC
GAGATGGTCATGCGGAACGTCTTCGGCTGGTTCCCGGCCTACATCCGACCGCCGGGCCTGGGCTGCGGGGGGCGG
TGCCAGGGCTTCTTGCGCCAGCGGGGCTACCACGTCATCTCGACCAACTTCGACATGCACGACGACAAGTACGAC
AGCGCGGCCCGGATCGGAGAGGCCAAGAAGAAGTTCAGCAGCGACATCTCGAAGGCGGCCGACAAGAACAGCTAC
ATCGTGCGGCTCCGCGACGGGTACCGCCAGACGGTCGTCAACCTCACGGCCCACGTGGTGCACGAGGCGAGGGCG
CGCGGCTACCGGCTCGTGACGGTGGGCGAGTGCGTCGGCGACCCCAAGCGGTACTGGTACCGGCCGACCAAGGAG
CCGGACATGAACCGATCGGCGCCGGCGCCGCTGCTGGCCGCCCGGGCCCCCGTCGTCGAGGAGGAGCTGCCGCCG
TGGCCCCCCTTTTCGATCTGGGACATTGTGAACAAGACGAGGCCGAAGTCGCCCGGGGGCGGGCCCTGGCTCGAC
CCTGCTCAGCGGCCACGCTGCGGCCCAAAATACGGACTACGGTGCATGGGCTCGAAAGAGGCGCCCTGCTGCTCC
TACTGGGGCATCTGCGGCTCGGAGCCCGAGTACTGCGGCACCGGGTGCAGAGAGTCGTACGGCACGTGCGACGTC
ACGTCGGGCATGAGCCTGGAGAACTCGACCAACGGGCTGTGCGGCGTCGAGTTCAACGCCGGCTGCTCGGCCGAC
GCGAAGAGGCCATGCTGCTCGGAGGCCGGAATGTGCGGTTCCGGGCCAACCTCGTGCGGCCGCGGCTGCCAAGCG
GACTACGGGGACTGCATGTAA
Gene >Hirsu2|5438
ATGAAGCCGACGCCGGGCAGCAGAAGCCTCGCCAGCCTCTTGGTCCTCGGCCTCGCTCGCACAATAGGCGGAATC
GCACTGCAGACGGCACGCGAGCCAGCCATCGAGGAAGTCTGGTGCGGCTGGGAAAAATTCCTCTTCATCTTGCAC
AAACCCCGGAGCTGTCCACCCAACCATTGCTGTTCAGGGAATGGAACCTGCGGCACGACAGGCCAACACTGCGGT
GGCGGGGGGTGCCAGGTAGGCCTCAGCGACTCGTGCGATGCCTTGTAAGTAGCGTTGTCTGGTGTCGCGTTCCAG
TCAGATGACTGACGGTCCGTTGGACTTCCAGCTACGGCCCCGCGGGCGAGAATACCACAGACATCCCGCGGCCAC
GGATCAAGGGACCTGTTCCTTACGGTACGCACCTCGCCGAGGCCCGGCACGCGGATCGGCGTCCAGGGCCGCAAG
GGCGACTGCCCTCTGCTTAGACTCGGCGGCTGACACCAGAATACACAGGCAACATGATAGATAAATGCTCGAAGC
CGGGCCTCATGGCCCTGACCTTCGACGACGCACCGAGCAAATACACGGAAGAGCTGCTGAACCTCCTGGACGAGC
TCAAGGCCAACGTCACCTTCTTCGTCTCGGGCAACAGCCGGTCCCAGGGCCATGTCGACGACGAGCTGAAGGCCT
GGCCCGGCCTCCTGCGGCGCATGCACGCGGCCGGGCACCAGATTGCGAGCAGCACCTGGACCCACCGTGACCTGG
ACGGGACCTTCGGCCGGTGGTTTCTGACGTACGAGCCGGACCGGGGGCTCCGGGCGCGGATCCGGAACTCGGAGG
TCACGTTCAACGAGATGGTCATGCGGAACGTCTTCGGCTGGTTCCCGGCCTACATCCGACCGCCGGGCCTGGGCT
GCGGGGGGCGGTGCCAGGGCTTCTTGCGCCAGCGGGGCTACCACGTCATCTCGACCAACTTCGACATGCACGACG
ACAAGTACGACAGCGCGGCCCGGATCGGAGAGGCCAAGAAGAAGTTCAGCAGCGACATCTCGAAGGCGGCCGACA
AGAACAGCTACATCGTGCGGCTCCGCGACGGGTACCGCCAGACGGTCGTCAACCTCACGGCCCACGTGGTGCACG
AGGCGAGGGCGCGCGGCTACCGGCTCGTGACGGTGGGCGAGTGCGTCGGCGACCCCAAGCGGTACTGGTACCGGC
CGACCAAGGAGCCGGACATGAACCGATCGGCGCCGGCGCCGCTGCTGGCCGCCCGGGCCCCCGTCGTCGAGGAGG
AGCTGCCGCCGTGGCCCCCCTTTTCGATCTGGGACATTGTGAACAAGACGAGGCCGAAGTCGCCCGGGGGCGGGC
CCTGGCTCGACCCTGCTCAGCGGCCACGCTGCGGCCCAAAATACGGACTACGGTGCATGGGCTCGAAAGAGGCGC
CCTGCTGCTCCTACTGGGGCATCTGGTAAGCAGGCCATCGCCCCCTCCCCTTGAAATCGTGGAACGGGACGCCGT
CTTCTTCGGAACCCTCTTCCCAGCCGCAGACGTGCCCGACTCGCGCGGACGAGCCCGCTGACGCTTCCTCTCACG
CACGCACAAGCGGCTCGGAGCCCGAGTACTGCGGCACCGGGTGCAGAGAGTCGTACGGCACGTGCGACGTCACGT
CGGGCATGAGCCTGGAGAACTCGACCAACGGGCTGTGCGGCGTCGAGTTCAACGCCGGCTGCTCGGCCGACGCGA
AGAGGCCATGCTGCTCGGAGGCCGGAATGTGGTAAGTCGCACCAGACAGCACCAAGACTCGCCGACGCCTGCTGA
CTCGCCGACCTCTCTCTCCCTCTCTCTCCGCCAGCGGTTCCGGGCCAACCTCGTGCGGCCGCGGCTGCCAAGCGG
ACTACGGGGACTGCATGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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