Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5437
Gene name
LocationContig_272:14766..17112
Strand-
Gene length (bp)2346
Transcript length (bp)2106
Coding sequence length (bp)2106
Protein length (aa) 702

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03142 Chitin_synth_2 Chitin synthase 1.4E-26 336 691
PF13632 Glyco_trans_2_3 Glycosyl transferase family group 2 1.2E-06 394 627

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q4P9K9|CHS8_USTMA Chitin synthase 8 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS8 PE=3 SV=1 237 684 2.0E-27
sp|O13395|CHS6_USTMA Chitin synthase 6 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS6 PE=3 SV=2 230 693 9.0E-27
sp|P30573|CHS3_CANAX Chitin synthase 3 OS=Candida albicans GN=CHS3 PE=3 SV=1 238 695 2.0E-23
sp|P29465|CHS3_YEAST Chitin synthase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CHS3 PE=1 SV=3 238 693 3.0E-20
sp|P78611|CHSD_EMENI Chitin synthase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chsD PE=3 SV=4 240 696 5.0E-20
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Swissprot ID Swissprot Description Start End E-value
sp|Q4P9K9|CHS8_USTMA Chitin synthase 8 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS8 PE=3 SV=1 237 684 2.0E-27
sp|O13395|CHS6_USTMA Chitin synthase 6 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS6 PE=3 SV=2 230 693 9.0E-27
sp|P30573|CHS3_CANAX Chitin synthase 3 OS=Candida albicans GN=CHS3 PE=3 SV=1 238 695 2.0E-23
sp|P29465|CHS3_YEAST Chitin synthase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CHS3 PE=1 SV=3 238 693 3.0E-20
sp|P78611|CHSD_EMENI Chitin synthase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chsD PE=3 SV=4 240 696 5.0E-20
sp|J9VXM5|CHS3_CRYNH Chitin synthase 3 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CHS3 PE=3 SV=1 238 694 1.0E-18
sp|O13356|CHS1_CRYNH Chitin synthase 1 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CHS1 PE=3 SV=2 215 695 1.0E-18
sp|O13353|CHS4_MAGO7 Chitin synthase 4 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CHS4 PE=3 SV=2 238 691 8.0E-18
sp|O13394|CHS5_USTMA Chitin synthase 5 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS5 PE=3 SV=3 238 693 1.0E-16
sp|Q01285|CHS4_NEUCR Chitin synthase 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=chs-4 PE=3 SV=3 238 696 3.0E-16
sp|Q4P333|CHS7_USTMA Chitin synthase 7 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS7 PE=3 SV=1 237 683 1.0E-15
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 55 0.45

Transmembrane Domains

Domain # Start End Length
1 124 142 18
2 149 171 22
3 579 601 22
4 614 636 22
5 649 671 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5437
MAKLTKPPQIEPPRPEQETEAGEEKEAARSASKDKQRERLPPPVSLHNPRLAAAAPFPIQRDAPAARARSSSPAR
RSQTPRSNVTHDSDASFSSCLQQEEAKLRWDAERELEQVSRNLLRLQKWGLIAGLVLLNGGLIYVSLRFREVYFL
SVVLLSTNTALQALMIACIAGHLVATRLARLVARCCCCLSFRRRQGQGQGQQGGRGADDDGETRPTTTTTTTTTT
TTTTTTTSPESMVMLLPCYNETLGELRRSLDSLVDQEGLDGHARLILIVVDGEARGPGMAKTTQRHLVEDVLGPG
ARRAFDNGYRARDGLLMPVRTQTGSYRGLPYVLVGKRHNQGKRDSLCFARSLLYHLRHRAGEAGVRTMFSSELFE
HLGGALVRHGVGRPDVLVGMDADTVFDARCVAELLRAVRRRPALVGVCGHVCVDFGARPFGLWSLYQSVEYAQTQ
GLRRTFQSRITGKVNCLPGCCQLIRVDEATFGDAVLRDRFGYCPKPNDVMTRHIMGSYSEDSIHASIVFSLFPAK
QTAQALRAKAFTVVPQSWPVFLSQRKRWALGSVSNEFVMIFRPGIILVERLQSLVAVTTWAITPFIAAAVAELLL
LVARRGPDLFRDPVFLGLICVLLARYLYSFCIGFWLPRTNFERLQYFVGYFFHFFTSPFVNIIVLVYSLLYSDDF
KWGKTREVVAGGEDKADDGAGLRRTH*
Coding >Hirsu2|5437
ATGGCCAAGCTCACCAAGCCTCCCCAGATCGAGCCTCCCCGGCCGGAGCAAGAGACTGAAGCGGGAGAAGAGAAA
GAAGCCGCAAGATCGGCGAGCAAAGACAAACAGCGGGAGCGTCTGCCGCCGCCCGTCTCGCTCCACAACCCGAGG
CTGGCGGCGGCGGCCCCTTTTCCGATCCAACGAGACGCGCCGGCGGCCCGGGCCCGGAGCAGCAGCCCGGCGCGG
CGTTCGCAGACGCCGCGGTCCAACGTGACGCACGACTCGGACGCCTCCTTCAGCTCGTGCCTGCAGCAGGAGGAG
GCCAAGCTGCGGTGGGACGCGGAGCGGGAGCTGGAGCAGGTGTCGCGCAACCTGCTCCGGCTGCAGAAATGGGGC
CTCATCGCCGGCCTGGTGCTGCTCAACGGCGGCCTGATCTACGTCTCACTGCGCTTCCGCGAGGTCTACTTCCTG
TCCGTCGTGCTGCTGAGCACCAACACGGCGCTGCAGGCGCTGATGATCGCCTGCATCGCCGGCCACCTGGTGGCG
ACGCGGCTGGCGCGCCTCGTCGCCCGCTGCTGCTGCTGTCTCTCCTTCCGGCGGCGCCAGGGACAGGGGCAGGGG
CAGCAGGGAGGACGAGGAGCGGATGACGATGGTGAGACGAGGCCGACGACGACGACGACGACGACGACGACGACG
ACGACGACGACGACGACGACGAGCCCGGAGTCGATGGTGATGCTGCTGCCGTGCTACAACGAGACGCTCGGCGAG
CTTCGGCGCTCGCTCGACTCGCTCGTCGACCAGGAGGGCCTCGACGGGCACGCGCGGCTGATCCTGATCGTCGTC
GACGGCGAGGCGCGCGGGCCTGGCATGGCCAAGACGACGCAGCGGCACCTGGTCGAGGACGTGCTCGGGCCGGGC
GCGCGGCGGGCCTTCGACAACGGCTACCGGGCGCGCGACGGGCTGCTGATGCCGGTGCGGACGCAGACGGGGTCC
TACCGCGGGCTGCCGTACGTGCTGGTCGGCAAGCGGCACAACCAGGGCAAACGCGACAGCCTGTGCTTCGCCCGC
TCGCTCCTCTATCACCTGCGGCACCGGGCCGGCGAGGCCGGGGTGCGGACCATGTTCAGCAGCGAGCTGTTCGAG
CACCTGGGCGGCGCCCTGGTGCGGCACGGCGTCGGCCGGCCCGATGTCCTGGTCGGCATGGACGCCGACACCGTC
TTCGACGCCCGCTGCGTCGCCGAGCTGCTGCGGGCCGTCCGGCGCCGGCCGGCCCTGGTCGGCGTCTGCGGCCAC
GTCTGCGTCGACTTCGGCGCCCGGCCCTTCGGCCTCTGGTCGCTCTACCAGTCGGTCGAGTACGCCCAGACGCAG
GGCCTGCGCCGGACCTTCCAGTCGCGCATCACCGGCAAGGTCAACTGCCTGCCCGGCTGCTGCCAGCTGATCCGC
GTCGACGAGGCCACCTTTGGCGACGCCGTCCTGCGCGACCGCTTCGGCTACTGCCCCAAGCCCAACGACGTCATG
ACGCGCCACATCATGGGCAGCTACTCCGAGGACAGCATCCACGCCTCCATCGTCTTCAGCCTCTTCCCGGCCAAG
CAGACGGCCCAGGCGCTGCGCGCAAAGGCCTTCACCGTCGTGCCCCAGTCCTGGCCCGTCTTCCTGTCGCAGCGC
AAGCGCTGGGCCCTCGGCAGCGTCTCCAACGAGTTCGTCATGATCTTCCGCCCGGGCATCATCCTCGTCGAGCGC
CTGCAGAGCCTCGTCGCCGTCACCACCTGGGCCATCACCCCCTTCATCGCCGCCGCCGTCGCCGAGCTGCTGCTC
CTCGTCGCCCGGCGCGGCCCCGACCTGTTCCGCGACCCCGTCTTCCTCGGCCTCATCTGCGTGCTTCTCGCTCGA
TATCTGTACTCCTTCTGCATCGGCTTCTGGCTGCCGCGCACCAACTTCGAGCGCCTGCAGTACTTCGTCGGCTAC
TTCTTCCACTTCTTCACCTCGCCCTTCGTCAACATCATCGTCCTCGTCTACTCCCTCCTCTACTCCGACGACTTC
AAGTGGGGGAAGACCAGGGAGGTCGTTGCCGGGGGCGAAGACAAGGCCGACGACGGCGCTGGATTGCGGCGGACG
CACTGA
Transcript >Hirsu2|5437
ATGGCCAAGCTCACCAAGCCTCCCCAGATCGAGCCTCCCCGGCCGGAGCAAGAGACTGAAGCGGGAGAAGAGAAA
GAAGCCGCAAGATCGGCGAGCAAAGACAAACAGCGGGAGCGTCTGCCGCCGCCCGTCTCGCTCCACAACCCGAGG
CTGGCGGCGGCGGCCCCTTTTCCGATCCAACGAGACGCGCCGGCGGCCCGGGCCCGGAGCAGCAGCCCGGCGCGG
CGTTCGCAGACGCCGCGGTCCAACGTGACGCACGACTCGGACGCCTCCTTCAGCTCGTGCCTGCAGCAGGAGGAG
GCCAAGCTGCGGTGGGACGCGGAGCGGGAGCTGGAGCAGGTGTCGCGCAACCTGCTCCGGCTGCAGAAATGGGGC
CTCATCGCCGGCCTGGTGCTGCTCAACGGCGGCCTGATCTACGTCTCACTGCGCTTCCGCGAGGTCTACTTCCTG
TCCGTCGTGCTGCTGAGCACCAACACGGCGCTGCAGGCGCTGATGATCGCCTGCATCGCCGGCCACCTGGTGGCG
ACGCGGCTGGCGCGCCTCGTCGCCCGCTGCTGCTGCTGTCTCTCCTTCCGGCGGCGCCAGGGACAGGGGCAGGGG
CAGCAGGGAGGACGAGGAGCGGATGACGATGGTGAGACGAGGCCGACGACGACGACGACGACGACGACGACGACG
ACGACGACGACGACGACGACGAGCCCGGAGTCGATGGTGATGCTGCTGCCGTGCTACAACGAGACGCTCGGCGAG
CTTCGGCGCTCGCTCGACTCGCTCGTCGACCAGGAGGGCCTCGACGGGCACGCGCGGCTGATCCTGATCGTCGTC
GACGGCGAGGCGCGCGGGCCTGGCATGGCCAAGACGACGCAGCGGCACCTGGTCGAGGACGTGCTCGGGCCGGGC
GCGCGGCGGGCCTTCGACAACGGCTACCGGGCGCGCGACGGGCTGCTGATGCCGGTGCGGACGCAGACGGGGTCC
TACCGCGGGCTGCCGTACGTGCTGGTCGGCAAGCGGCACAACCAGGGCAAACGCGACAGCCTGTGCTTCGCCCGC
TCGCTCCTCTATCACCTGCGGCACCGGGCCGGCGAGGCCGGGGTGCGGACCATGTTCAGCAGCGAGCTGTTCGAG
CACCTGGGCGGCGCCCTGGTGCGGCACGGCGTCGGCCGGCCCGATGTCCTGGTCGGCATGGACGCCGACACCGTC
TTCGACGCCCGCTGCGTCGCCGAGCTGCTGCGGGCCGTCCGGCGCCGGCCGGCCCTGGTCGGCGTCTGCGGCCAC
GTCTGCGTCGACTTCGGCGCCCGGCCCTTCGGCCTCTGGTCGCTCTACCAGTCGGTCGAGTACGCCCAGACGCAG
GGCCTGCGCCGGACCTTCCAGTCGCGCATCACCGGCAAGGTCAACTGCCTGCCCGGCTGCTGCCAGCTGATCCGC
GTCGACGAGGCCACCTTTGGCGACGCCGTCCTGCGCGACCGCTTCGGCTACTGCCCCAAGCCCAACGACGTCATG
ACGCGCCACATCATGGGCAGCTACTCCGAGGACAGCATCCACGCCTCCATCGTCTTCAGCCTCTTCCCGGCCAAG
CAGACGGCCCAGGCGCTGCGCGCAAAGGCCTTCACCGTCGTGCCCCAGTCCTGGCCCGTCTTCCTGTCGCAGCGC
AAGCGCTGGGCCCTCGGCAGCGTCTCCAACGAGTTCGTCATGATCTTCCGCCCGGGCATCATCCTCGTCGAGCGC
CTGCAGAGCCTCGTCGCCGTCACCACCTGGGCCATCACCCCCTTCATCGCCGCCGCCGTCGCCGAGCTGCTGCTC
CTCGTCGCCCGGCGCGGCCCCGACCTGTTCCGCGACCCCGTCTTCCTCGGCCTCATCTGCGTGCTTCTCGCTCGA
TATCTGTACTCCTTCTGCATCGGCTTCTGGCTGCCGCGCACCAACTTCGAGCGCCTGCAGTACTTCGTCGGCTAC
TTCTTCCACTTCTTCACCTCGCCCTTCGTCAACATCATCGTCCTCGTCTACTCCCTCCTCTACTCCGACGACTTC
AAGTGGGGGAAGACCAGGGAGGTCGTTGCCGGGGGCGAAGACAAGGCCGACGACGGCGCTGGATTGCGGCGGACG
CACTGA
Gene >Hirsu2|5437
ATGGCCAAGCTCACCAAGCCTCCCCAGATCGAGCCTCCCCGGCCGGAGCAAGAGACTGAAGCGGGAGAAGAGAAA
GAAGCCGCAAGATCGGCGAGCAAAGACAAACAGCGGGAGCGTCTGCCGCCGCCCGTCTCGCTCCACAACCCGAGG
CTGGCGGCGGCGGCCCCTTTTCCGATCCAACGAGACGCGGTAGGTGCGGCACGCCTGTTGGAAGCATGAGAAAGG
GGAAAAGCAAAACAAAAAAGAAAGGCTGAAGAAGAAGAAAGTAAGGTGTCTGAACAGCTAGACGAGATGCGAACG
CGCAGCCGGCGGCCCGGGCCCGGAGCAGCAGCCCGGCGCGGCGTTCGCAGACGCCGCGGTCCAACGTGACGCACG
ACTCGGACGCCTCCTTCAGCTCGTGCCTGCAGCAGGAGGAGGCCAAGCTGCGGTGGGACGCGGAGCGGGAGCTGG
AGCAGGTGTCGCGCAACCTGCTCCGGCTGCAGAAATGGGGCCTCATCGCCGGCCTGGTGCTGCTCAACGGCGGCC
TGATCTACGTCTCACTGCGCTTCCGCGAGGTCTACTTCCTGTCCGTCGTGCTGCTGAGCACCAACACGGCGCTGC
AGGCGCTGATGATCGCCTGCATCGCCGGCCACCTGGTGGCGACGCGGCTGGCGCGCCTCGTCGCCCGCTGCTGCT
GCTGTCTCTCCTTCCGGCGGCGCCAGGGACAGGGGCAGGGGCAGCAGGGAGGACGAGGAGCGGATGACGATGGTG
AGACGAGGCCGACGACGACGACGACGACGACGACGACGACGACGACGACGACGACGACGACGAGCCCGGAGTCGA
TGGTGATGCTGCTGCCGTGCTACAACGAGACGCTCGGCGAGCTTCGGCGCTCGCTCGACTCGCTCGTCGACCAGG
AGGGCCTCGACGGGCACGCGCGGCTGATCCTGATCGTCGTCGACGGCGAGGCGCGCGGGCCTGGCATGGCCAAGA
CGACGCAGCGGCACCTGGTCGAGGACGTGCTCGGGCCGGGCGCGCGGCGGGCCTTCGACAACGGCTACCGGGCGC
GCGACGGGCTGCTGATGCCGGTGCGGACGCAGACGGGGTCCTACCGCGGGCTGCCGTACGTGCTGGTCGGCAAGC
GGCACAACCAGGGCAAACGCGACAGCCTGTGCTTCGCCCGCTCGCTCCTCTATCACCTGCGGCACCGGGCCGGCG
AGGCCGGGGTGCGGACCATGTTCAGCAGCGAGCTGTTCGAGCACCTGGGCGGCGCCCTGGTGCGGCACGGCGTCG
GCCGGCCCGATGTCCTGGTCGGCATGGACGCCGACACCGTCTTCGACGCCCGCTGCGTCGCCGAGCTGCTGCGGG
CCGTCCGGCGCCGGCCGGCCCTGGTCGGCGTCTGCGGCCACGTCTGCGTCGACTTCGGCGCCCGGCCCTTCGGCC
TCTGGTCGCTCTACCAGTCGGTCGAGTACGCCCAGACGCAGGGCCTGCGCCGGACCTTCCAGTCGCGCATCACCG
GCAAGGTCAACTGCCTGCCCGGCTGCTGCCAGCTGATCCGCGTCGACGAGGCCACCTTTGGCGACGCCGTCCTGC
GCGACCGCTTCGGCTACTGCCCCAAGCCCAACGACGTCATGACGCGCCACATCATGGGCAGCTACTCCGAGGACA
GCATCCACGCCTCCATCGTCTTCAGCCTCTTCCCGGCCAAGCAGACGGCCCAGGCGCTGCGCGCAAAGGCCTTCA
CCGTCGTGCCCCAGTCCTGGCCCGTCTTCCTGTCGCAGCGCAAGCGCTGGGCCCTCGGCAGCGTCTCCAACGAGT
TCGTCATGATCTTCCGCCCGGGCATCATCCTCGTCGAGCGCCTGCAGAGCCTCGTCGCCGTCACCACCTGGGCCA
TCACCCCCTTCATCGCCGCCGCCGTCGCCGAGCTGCTGCTCCTCGTCGCCCGGCGCGGCCCCGACCTGTTCCGCG
ACCCCGTCTTCCTCGGCCTCATCTGCGTGCTTCTCGCTCGATATGTGAGTCCGCTGCCGTCTCTGTTCCTTGTGT
CGCTGTTCTCGCCCTGCCTGCCTCCCTCGATGAGTTGTCGTCGTCGTCGACGACGCAAACACTCGCTCCTTGACG
CTGACCTTGGTCCCGCAGCTGTACTCCTTCTGCATCGGCTTCTGGCTGCCGCGCACCAACTTCGAGCGCCTGCAG
TACTTCGTCGGCTACTTCTTCCACTTCTTCACCTCGCCCTTCGTCAACATCATCGTCCTCGTCTACTCCCTCCTC
TACTCCGACGACTTCAAGTGGGGGAAGACCAGGGAGGTCGTTGCCGGGGGCGAAGACAAGGCCGACGACGGCGCT
GGATTGCGGCGGACGCACTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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