© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5437 |
| Gene name | |
| Location | Contig_272:14766..17112 |
| Strand | - |
| Gene length (bp) | 2346 |
| Transcript length (bp) | 2106 |
| Coding sequence length (bp) | 2106 |
| Protein length (aa) | 702 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03142 | Chitin_synth_2 | Chitin synthase | 1.6E-26 | 336 | 691 |
| PF13632 | Glyco_trans_2_3 | Glycosyl transferase family group 2 | 1.2E-06 | 394 | 627 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q4P9K9|CHS8_USTMA | Chitin synthase 8 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS8 PE=3 SV=1 | 237 | 684 | 2.0E-27 |
| sp|O13395|CHS6_USTMA | Chitin synthase 6 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS6 PE=3 SV=2 | 230 | 693 | 9.0E-27 |
| sp|P30573|CHS3_CANAX | Chitin synthase 3 OS=Candida albicans GN=CHS3 PE=3 SV=1 | 238 | 695 | 2.0E-23 |
| sp|P29465|CHS3_YEAST | Chitin synthase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CHS3 PE=1 SV=3 | 238 | 693 | 3.0E-20 |
| sp|P78611|CHSD_EMENI | Chitin synthase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chsD PE=3 SV=4 | 240 | 696 | 5.0E-20 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q4P9K9|CHS8_USTMA | Chitin synthase 8 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS8 PE=3 SV=1 | 237 | 684 | 2.0E-27 |
| sp|O13395|CHS6_USTMA | Chitin synthase 6 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS6 PE=3 SV=2 | 230 | 693 | 9.0E-27 |
| sp|P30573|CHS3_CANAX | Chitin synthase 3 OS=Candida albicans GN=CHS3 PE=3 SV=1 | 238 | 695 | 2.0E-23 |
| sp|P29465|CHS3_YEAST | Chitin synthase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CHS3 PE=1 SV=3 | 238 | 693 | 3.0E-20 |
| sp|P78611|CHSD_EMENI | Chitin synthase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chsD PE=3 SV=4 | 240 | 696 | 5.0E-20 |
| sp|J9VXM5|CHS3_CRYNH | Chitin synthase 3 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CHS3 PE=3 SV=1 | 238 | 694 | 1.0E-18 |
| sp|O13356|CHS1_CRYNH | Chitin synthase 1 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CHS1 PE=3 SV=2 | 215 | 695 | 1.0E-18 |
| sp|O13353|CHS4_MAGO7 | Chitin synthase 4 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CHS4 PE=3 SV=2 | 238 | 691 | 8.0E-18 |
| sp|O13394|CHS5_USTMA | Chitin synthase 5 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS5 PE=3 SV=3 | 238 | 693 | 1.0E-16 |
| sp|Q01285|CHS4_NEUCR | Chitin synthase 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=chs-4 PE=3 SV=3 | 238 | 696 | 3.0E-16 |
| sp|Q4P333|CHS7_USTMA | Chitin synthase 7 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS7 PE=3 SV=1 | 237 | 683 | 1.0E-15 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 55 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 124 | 142 | 18 |
| 2 | 149 | 171 | 22 |
| 3 | 579 | 601 | 22 |
| 4 | 614 | 636 | 22 |
| 5 | 649 | 671 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5437 MAKLTKPPQIEPPRPEQETEAGEEKEAARSASKDKQRERLPPPVSLHNPRLAAAAPFPIQRDAPAARARSSSPAR RSQTPRSNVTHDSDASFSSCLQQEEAKLRWDAERELEQVSRNLLRLQKWGLIAGLVLLNGGLIYVSLRFREVYFL SVVLLSTNTALQALMIACIAGHLVATRLARLVARCCCCLSFRRRQGQGQGQQGGRGADDDGETRPTTTTTTTTTT TTTTTTTSPESMVMLLPCYNETLGELRRSLDSLVDQEGLDGHARLILIVVDGEARGPGMAKTTQRHLVEDVLGPG ARRAFDNGYRARDGLLMPVRTQTGSYRGLPYVLVGKRHNQGKRDSLCFARSLLYHLRHRAGEAGVRTMFSSELFE HLGGALVRHGVGRPDVLVGMDADTVFDARCVAELLRAVRRRPALVGVCGHVCVDFGARPFGLWSLYQSVEYAQTQ GLRRTFQSRITGKVNCLPGCCQLIRVDEATFGDAVLRDRFGYCPKPNDVMTRHIMGSYSEDSIHASIVFSLFPAK QTAQALRAKAFTVVPQSWPVFLSQRKRWALGSVSNEFVMIFRPGIILVERLQSLVAVTTWAITPFIAAAVAELLL LVARRGPDLFRDPVFLGLICVLLARYLYSFCIGFWLPRTNFERLQYFVGYFFHFFTSPFVNIIVLVYSLLYSDDF KWGKTREVVAGGEDKADDGAGLRRTH* |
| Coding | >Hirsu2|5437 ATGGCCAAGCTCACCAAGCCTCCCCAGATCGAGCCTCCCCGGCCGGAGCAAGAGACTGAAGCGGGAGAAGAGAAA GAAGCCGCAAGATCGGCGAGCAAAGACAAACAGCGGGAGCGTCTGCCGCCGCCCGTCTCGCTCCACAACCCGAGG CTGGCGGCGGCGGCCCCTTTTCCGATCCAACGAGACGCGCCGGCGGCCCGGGCCCGGAGCAGCAGCCCGGCGCGG CGTTCGCAGACGCCGCGGTCCAACGTGACGCACGACTCGGACGCCTCCTTCAGCTCGTGCCTGCAGCAGGAGGAG GCCAAGCTGCGGTGGGACGCGGAGCGGGAGCTGGAGCAGGTGTCGCGCAACCTGCTCCGGCTGCAGAAATGGGGC CTCATCGCCGGCCTGGTGCTGCTCAACGGCGGCCTGATCTACGTCTCACTGCGCTTCCGCGAGGTCTACTTCCTG TCCGTCGTGCTGCTGAGCACCAACACGGCGCTGCAGGCGCTGATGATCGCCTGCATCGCCGGCCACCTGGTGGCG ACGCGGCTGGCGCGCCTCGTCGCCCGCTGCTGCTGCTGTCTCTCCTTCCGGCGGCGCCAGGGACAGGGGCAGGGG CAGCAGGGAGGACGAGGAGCGGATGACGATGGTGAGACGAGGCCGACGACGACGACGACGACGACGACGACGACG ACGACGACGACGACGACGACGAGCCCGGAGTCGATGGTGATGCTGCTGCCGTGCTACAACGAGACGCTCGGCGAG CTTCGGCGCTCGCTCGACTCGCTCGTCGACCAGGAGGGCCTCGACGGGCACGCGCGGCTGATCCTGATCGTCGTC GACGGCGAGGCGCGCGGGCCTGGCATGGCCAAGACGACGCAGCGGCACCTGGTCGAGGACGTGCTCGGGCCGGGC GCGCGGCGGGCCTTCGACAACGGCTACCGGGCGCGCGACGGGCTGCTGATGCCGGTGCGGACGCAGACGGGGTCC TACCGCGGGCTGCCGTACGTGCTGGTCGGCAAGCGGCACAACCAGGGCAAACGCGACAGCCTGTGCTTCGCCCGC TCGCTCCTCTATCACCTGCGGCACCGGGCCGGCGAGGCCGGGGTGCGGACCATGTTCAGCAGCGAGCTGTTCGAG CACCTGGGCGGCGCCCTGGTGCGGCACGGCGTCGGCCGGCCCGATGTCCTGGTCGGCATGGACGCCGACACCGTC TTCGACGCCCGCTGCGTCGCCGAGCTGCTGCGGGCCGTCCGGCGCCGGCCGGCCCTGGTCGGCGTCTGCGGCCAC GTCTGCGTCGACTTCGGCGCCCGGCCCTTCGGCCTCTGGTCGCTCTACCAGTCGGTCGAGTACGCCCAGACGCAG GGCCTGCGCCGGACCTTCCAGTCGCGCATCACCGGCAAGGTCAACTGCCTGCCCGGCTGCTGCCAGCTGATCCGC GTCGACGAGGCCACCTTTGGCGACGCCGTCCTGCGCGACCGCTTCGGCTACTGCCCCAAGCCCAACGACGTCATG ACGCGCCACATCATGGGCAGCTACTCCGAGGACAGCATCCACGCCTCCATCGTCTTCAGCCTCTTCCCGGCCAAG CAGACGGCCCAGGCGCTGCGCGCAAAGGCCTTCACCGTCGTGCCCCAGTCCTGGCCCGTCTTCCTGTCGCAGCGC AAGCGCTGGGCCCTCGGCAGCGTCTCCAACGAGTTCGTCATGATCTTCCGCCCGGGCATCATCCTCGTCGAGCGC CTGCAGAGCCTCGTCGCCGTCACCACCTGGGCCATCACCCCCTTCATCGCCGCCGCCGTCGCCGAGCTGCTGCTC CTCGTCGCCCGGCGCGGCCCCGACCTGTTCCGCGACCCCGTCTTCCTCGGCCTCATCTGCGTGCTTCTCGCTCGA TATCTGTACTCCTTCTGCATCGGCTTCTGGCTGCCGCGCACCAACTTCGAGCGCCTGCAGTACTTCGTCGGCTAC TTCTTCCACTTCTTCACCTCGCCCTTCGTCAACATCATCGTCCTCGTCTACTCCCTCCTCTACTCCGACGACTTC AAGTGGGGGAAGACCAGGGAGGTCGTTGCCGGGGGCGAAGACAAGGCCGACGACGGCGCTGGATTGCGGCGGACG CACTGA |
| Transcript | >Hirsu2|5437 ATGGCCAAGCTCACCAAGCCTCCCCAGATCGAGCCTCCCCGGCCGGAGCAAGAGACTGAAGCGGGAGAAGAGAAA GAAGCCGCAAGATCGGCGAGCAAAGACAAACAGCGGGAGCGTCTGCCGCCGCCCGTCTCGCTCCACAACCCGAGG CTGGCGGCGGCGGCCCCTTTTCCGATCCAACGAGACGCGCCGGCGGCCCGGGCCCGGAGCAGCAGCCCGGCGCGG CGTTCGCAGACGCCGCGGTCCAACGTGACGCACGACTCGGACGCCTCCTTCAGCTCGTGCCTGCAGCAGGAGGAG GCCAAGCTGCGGTGGGACGCGGAGCGGGAGCTGGAGCAGGTGTCGCGCAACCTGCTCCGGCTGCAGAAATGGGGC CTCATCGCCGGCCTGGTGCTGCTCAACGGCGGCCTGATCTACGTCTCACTGCGCTTCCGCGAGGTCTACTTCCTG TCCGTCGTGCTGCTGAGCACCAACACGGCGCTGCAGGCGCTGATGATCGCCTGCATCGCCGGCCACCTGGTGGCG ACGCGGCTGGCGCGCCTCGTCGCCCGCTGCTGCTGCTGTCTCTCCTTCCGGCGGCGCCAGGGACAGGGGCAGGGG CAGCAGGGAGGACGAGGAGCGGATGACGATGGTGAGACGAGGCCGACGACGACGACGACGACGACGACGACGACG ACGACGACGACGACGACGACGAGCCCGGAGTCGATGGTGATGCTGCTGCCGTGCTACAACGAGACGCTCGGCGAG CTTCGGCGCTCGCTCGACTCGCTCGTCGACCAGGAGGGCCTCGACGGGCACGCGCGGCTGATCCTGATCGTCGTC GACGGCGAGGCGCGCGGGCCTGGCATGGCCAAGACGACGCAGCGGCACCTGGTCGAGGACGTGCTCGGGCCGGGC GCGCGGCGGGCCTTCGACAACGGCTACCGGGCGCGCGACGGGCTGCTGATGCCGGTGCGGACGCAGACGGGGTCC TACCGCGGGCTGCCGTACGTGCTGGTCGGCAAGCGGCACAACCAGGGCAAACGCGACAGCCTGTGCTTCGCCCGC TCGCTCCTCTATCACCTGCGGCACCGGGCCGGCGAGGCCGGGGTGCGGACCATGTTCAGCAGCGAGCTGTTCGAG CACCTGGGCGGCGCCCTGGTGCGGCACGGCGTCGGCCGGCCCGATGTCCTGGTCGGCATGGACGCCGACACCGTC TTCGACGCCCGCTGCGTCGCCGAGCTGCTGCGGGCCGTCCGGCGCCGGCCGGCCCTGGTCGGCGTCTGCGGCCAC GTCTGCGTCGACTTCGGCGCCCGGCCCTTCGGCCTCTGGTCGCTCTACCAGTCGGTCGAGTACGCCCAGACGCAG GGCCTGCGCCGGACCTTCCAGTCGCGCATCACCGGCAAGGTCAACTGCCTGCCCGGCTGCTGCCAGCTGATCCGC GTCGACGAGGCCACCTTTGGCGACGCCGTCCTGCGCGACCGCTTCGGCTACTGCCCCAAGCCCAACGACGTCATG ACGCGCCACATCATGGGCAGCTACTCCGAGGACAGCATCCACGCCTCCATCGTCTTCAGCCTCTTCCCGGCCAAG CAGACGGCCCAGGCGCTGCGCGCAAAGGCCTTCACCGTCGTGCCCCAGTCCTGGCCCGTCTTCCTGTCGCAGCGC AAGCGCTGGGCCCTCGGCAGCGTCTCCAACGAGTTCGTCATGATCTTCCGCCCGGGCATCATCCTCGTCGAGCGC CTGCAGAGCCTCGTCGCCGTCACCACCTGGGCCATCACCCCCTTCATCGCCGCCGCCGTCGCCGAGCTGCTGCTC CTCGTCGCCCGGCGCGGCCCCGACCTGTTCCGCGACCCCGTCTTCCTCGGCCTCATCTGCGTGCTTCTCGCTCGA TATCTGTACTCCTTCTGCATCGGCTTCTGGCTGCCGCGCACCAACTTCGAGCGCCTGCAGTACTTCGTCGGCTAC TTCTTCCACTTCTTCACCTCGCCCTTCGTCAACATCATCGTCCTCGTCTACTCCCTCCTCTACTCCGACGACTTC AAGTGGGGGAAGACCAGGGAGGTCGTTGCCGGGGGCGAAGACAAGGCCGACGACGGCGCTGGATTGCGGCGGACG CACTGA |
| Gene | >Hirsu2|5437 ATGGCCAAGCTCACCAAGCCTCCCCAGATCGAGCCTCCCCGGCCGGAGCAAGAGACTGAAGCGGGAGAAGAGAAA GAAGCCGCAAGATCGGCGAGCAAAGACAAACAGCGGGAGCGTCTGCCGCCGCCCGTCTCGCTCCACAACCCGAGG CTGGCGGCGGCGGCCCCTTTTCCGATCCAACGAGACGCGGTAGGTGCGGCACGCCTGTTGGAAGCATGAGAAAGG GGAAAAGCAAAACAAAAAAGAAAGGCTGAAGAAGAAGAAAGTAAGGTGTCTGAACAGCTAGACGAGATGCGAACG CGCAGCCGGCGGCCCGGGCCCGGAGCAGCAGCCCGGCGCGGCGTTCGCAGACGCCGCGGTCCAACGTGACGCACG ACTCGGACGCCTCCTTCAGCTCGTGCCTGCAGCAGGAGGAGGCCAAGCTGCGGTGGGACGCGGAGCGGGAGCTGG AGCAGGTGTCGCGCAACCTGCTCCGGCTGCAGAAATGGGGCCTCATCGCCGGCCTGGTGCTGCTCAACGGCGGCC TGATCTACGTCTCACTGCGCTTCCGCGAGGTCTACTTCCTGTCCGTCGTGCTGCTGAGCACCAACACGGCGCTGC AGGCGCTGATGATCGCCTGCATCGCCGGCCACCTGGTGGCGACGCGGCTGGCGCGCCTCGTCGCCCGCTGCTGCT GCTGTCTCTCCTTCCGGCGGCGCCAGGGACAGGGGCAGGGGCAGCAGGGAGGACGAGGAGCGGATGACGATGGTG AGACGAGGCCGACGACGACGACGACGACGACGACGACGACGACGACGACGACGACGACGACGAGCCCGGAGTCGA TGGTGATGCTGCTGCCGTGCTACAACGAGACGCTCGGCGAGCTTCGGCGCTCGCTCGACTCGCTCGTCGACCAGG AGGGCCTCGACGGGCACGCGCGGCTGATCCTGATCGTCGTCGACGGCGAGGCGCGCGGGCCTGGCATGGCCAAGA CGACGCAGCGGCACCTGGTCGAGGACGTGCTCGGGCCGGGCGCGCGGCGGGCCTTCGACAACGGCTACCGGGCGC GCGACGGGCTGCTGATGCCGGTGCGGACGCAGACGGGGTCCTACCGCGGGCTGCCGTACGTGCTGGTCGGCAAGC GGCACAACCAGGGCAAACGCGACAGCCTGTGCTTCGCCCGCTCGCTCCTCTATCACCTGCGGCACCGGGCCGGCG AGGCCGGGGTGCGGACCATGTTCAGCAGCGAGCTGTTCGAGCACCTGGGCGGCGCCCTGGTGCGGCACGGCGTCG GCCGGCCCGATGTCCTGGTCGGCATGGACGCCGACACCGTCTTCGACGCCCGCTGCGTCGCCGAGCTGCTGCGGG CCGTCCGGCGCCGGCCGGCCCTGGTCGGCGTCTGCGGCCACGTCTGCGTCGACTTCGGCGCCCGGCCCTTCGGCC TCTGGTCGCTCTACCAGTCGGTCGAGTACGCCCAGACGCAGGGCCTGCGCCGGACCTTCCAGTCGCGCATCACCG GCAAGGTCAACTGCCTGCCCGGCTGCTGCCAGCTGATCCGCGTCGACGAGGCCACCTTTGGCGACGCCGTCCTGC GCGACCGCTTCGGCTACTGCCCCAAGCCCAACGACGTCATGACGCGCCACATCATGGGCAGCTACTCCGAGGACA GCATCCACGCCTCCATCGTCTTCAGCCTCTTCCCGGCCAAGCAGACGGCCCAGGCGCTGCGCGCAAAGGCCTTCA CCGTCGTGCCCCAGTCCTGGCCCGTCTTCCTGTCGCAGCGCAAGCGCTGGGCCCTCGGCAGCGTCTCCAACGAGT TCGTCATGATCTTCCGCCCGGGCATCATCCTCGTCGAGCGCCTGCAGAGCCTCGTCGCCGTCACCACCTGGGCCA TCACCCCCTTCATCGCCGCCGCCGTCGCCGAGCTGCTGCTCCTCGTCGCCCGGCGCGGCCCCGACCTGTTCCGCG ACCCCGTCTTCCTCGGCCTCATCTGCGTGCTTCTCGCTCGATATGTGAGTCCGCTGCCGTCTCTGTTCCTTGTGT CGCTGTTCTCGCCCTGCCTGCCTCCCTCGATGAGTTGTCGTCGTCGTCGACGACGCAAACACTCGCTCCTTGACG CTGACCTTGGTCCCGCAGCTGTACTCCTTCTGCATCGGCTTCTGGCTGCCGCGCACCAACTTCGAGCGCCTGCAG TACTTCGTCGGCTACTTCTTCCACTTCTTCACCTCGCCCTTCGTCAACATCATCGTCCTCGTCTACTCCCTCCTC TACTCCGACGACTTCAAGTGGGGGAAGACCAGGGAGGTCGTTGCCGGGGGCGAAGACAAGGCCGACGACGGCGCT GGATTGCGGCGGACGCACTGA |