© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|5421 |
| Gene name | |
| Location | Contig_271:11973..12597 |
| Strand | + |
| Gene length (bp) | 624 |
| Transcript length (bp) | 624 |
| Coding sequence length (bp) | 624 |
| Protein length (aa) | 208 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4AXK7|A0926_ARTBC | Uncharacterized secreted protein ARB_00926 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00926 PE=1 SV=1 | 64 | 202 | 3.0E-15 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.128 | 0.0663 | 0.9579 | 0.0458 | 0.0503 | 0.0091 | 0.2597 | 0.1682 | 0.1958 | 0.0066 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 21 | 0.999475 |
| Orthofinder run ID | 4 |
| Orthogroup | 5373 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5421 MMLRRAIPYIYLSIGCLVALATPTPIDTGSNQLQDSTSHDVARAASGGGPNPLGNLAVTLKQTSSKPPTIQVTVT NKNKYPVTVLSYDSPLDQLALPLGLLSITPAGSTKPIDLPIIRVKRVWPPRDDSLIVIKPGASATSDIVLKDPPV PIKKLGRKATVILRGRWTAVWPRSKDKLSKAEIENPSSSAFNGDFVTNPLEIKVSQY* |
| Coding | >Hirsu2|5421 ATGATGCTCCGACGTGCTATCCCGTACATCTACCTTTCAATAGGGTGCTTGGTCGCGTTAGCGACCCCGACGCCC ATTGACACCGGCTCAAACCAACTGCAGGATTCCACGAGTCATGATGTCGCTCGAGCGGCTAGCGGCGGGGGCCCA AATCCCCTCGGCAATCTGGCCGTCACCTTGAAGCAAACCAGCTCCAAACCCCCTACCATACAAGTCACGGTCACC AACAAGAACAAGTACCCGGTCACAGTGCTCTCCTACGACTCGCCACTCGATCAGCTTGCCCTGCCGCTCGGTTTG CTGTCTATCACCCCCGCAGGTTCGACTAAACCGATCGACTTGCCCATCATACGGGTCAAGCGGGTGTGGCCGCCG CGAGACGATTCGCTCATCGTCATCAAGCCTGGTGCCAGTGCCACCAGCGACATAGTCCTCAAAGATCCGCCCGTG CCGATCAAGAAGCTCGGCAGAAAAGCCACCGTGATTCTTCGGGGCCGCTGGACCGCGGTCTGGCCTCGCTCGAAG GACAAGCTGAGCAAAGCGGAGATTGAGAATCCCAGCAGCAGCGCCTTCAATGGCGATTTTGTCACGAACCCGCTG GAGATCAAAGTTTCACAGTACTGA |
| Transcript | >Hirsu2|5421 ATGATGCTCCGACGTGCTATCCCGTACATCTACCTTTCAATAGGGTGCTTGGTCGCGTTAGCGACCCCGACGCCC ATTGACACCGGCTCAAACCAACTGCAGGATTCCACGAGTCATGATGTCGCTCGAGCGGCTAGCGGCGGGGGCCCA AATCCCCTCGGCAATCTGGCCGTCACCTTGAAGCAAACCAGCTCCAAACCCCCTACCATACAAGTCACGGTCACC AACAAGAACAAGTACCCGGTCACAGTGCTCTCCTACGACTCGCCACTCGATCAGCTTGCCCTGCCGCTCGGTTTG CTGTCTATCACCCCCGCAGGTTCGACTAAACCGATCGACTTGCCCATCATACGGGTCAAGCGGGTGTGGCCGCCG CGAGACGATTCGCTCATCGTCATCAAGCCTGGTGCCAGTGCCACCAGCGACATAGTCCTCAAAGATCCGCCCGTG CCGATCAAGAAGCTCGGCAGAAAAGCCACCGTGATTCTTCGGGGCCGCTGGACCGCGGTCTGGCCTCGCTCGAAG GACAAGCTGAGCAAAGCGGAGATTGAGAATCCCAGCAGCAGCGCCTTCAATGGCGATTTTGTCACGAACCCGCTG GAGATCAAAGTTTCACAGTACTGA |
| Gene | >Hirsu2|5421 ATGATGCTCCGACGTGCTATCCCGTACATCTACCTTTCAATAGGGTGCTTGGTCGCGTTAGCGACCCCGACGCCC ATTGACACCGGCTCAAACCAACTGCAGGATTCCACGAGTCATGATGTCGCTCGAGCGGCTAGCGGCGGGGGCCCA AATCCCCTCGGCAATCTGGCCGTCACCTTGAAGCAAACCAGCTCCAAACCCCCTACCATACAAGTCACGGTCACC AACAAGAACAAGTACCCGGTCACAGTGCTCTCCTACGACTCGCCACTCGATCAGCTTGCCCTGCCGCTCGGTTTG CTGTCTATCACCCCCGCAGGTTCGACTAAACCGATCGACTTGCCCATCATACGGGTCAAGCGGGTGTGGCCGCCG CGAGACGATTCGCTCATCGTCATCAAGCCTGGTGCCAGTGCCACCAGCGACATAGTCCTCAAAGATCCGCCCGTG CCGATCAAGAAGCTCGGCAGAAAAGCCACCGTGATTCTTCGGGGCCGCTGGACCGCGGTCTGGCCTCGCTCGAAG GACAAGCTGAGCAAAGCGGAGATTGAGAATCCCAGCAGCAGCGCCTTCAATGGCGATTTTGTCACGAACCCGCTG GAGATCAAAGTTTCACAGTACTGA |