Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|5420
Gene name
Location	Contig_271:9978..10942
Strand	-
Gene length (bp)	964
Transcript length (bp)	789
Coding sequence length (bp)	789
Protein length (aa)	263

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 35	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	20	42	22
2	55	77	22
3	100	122	22
4	135	157	22
5	177	199	22
6	212	234	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|5420 MSSTSSAAHTLHPDHISPRHVTFLAVASTLTALATTCTVLRFVQRLSIGFWWDDWFILAASAFAIGSLVTIILSA TVVHAGYHFAEYAISEINIFMKIALANNIIYNASISFSKASVIYFYYRIFGTYRALRLQLRIVSGLVALNFLAAV LGLVFATSPVRAQWDILVPHTTIHNKAFWSSMAIINISLDIVILAIPQARVWRLTLSFRRRVLVSLVFLLGAFVI IASCVRIIYMLTIDVNDVTCETSLTLSPTSRNVEACY*
Coding	>Hirsu2\|5420 ATGAGTTCCACATCCAGTGCGGCTCATACGCTGCACCCAGACCATATCAGTCCTCGCCACGTTACTTTCCTCGCC GTTGCCTCGACATTGACTGCACTAGCGACCACGTGCACTGTCTTGAGATTCGTCCAGCGCCTTTCTATAGGATTC TGGTGGGATGATTGGTTCATTCTCGCCGCTTCGGCCTTCGCAATTGGTAGCTTGGTGACAATTATTCTGTCCGCA ACTGTTGTGCACGCAGGCTACCACTTTGCTGAATATGCCATCTCAGAGATAAATATATTCATGAAGATTGCGCTG GCAAACAACATCATCTACAATGCGAGCATCAGCTTCTCCAAGGCTTCGGTCATTTACTTTTACTACCGCATATTT GGGACCTACCGTGCGCTTCGGCTTCAGCTACGCATTGTCAGCGGTTTGGTTGCCCTGAATTTCCTTGCCGCAGTA CTGGGCCTGGTTTTTGCCACCAGCCCGGTCCGGGCGCAATGGGACATTCTTGTTCCACATACCACTATCCACAAC AAGGCATTCTGGTCGTCAATGGCTATAATCAATATCTCGCTGGACATTGTTATTTTAGCCATTCCGCAGGCTCGT GTATGGCGCCTCACGCTTTCTTTTCGACGCAGAGTACTGGTATCCCTGGTCTTCTTGCTAGGAGCCTTCGTTATA ATAGCAAGCTGCGTCCGCATCATTTACATGCTCACGATCGACGTGAACGATGTCACTTGTGAGACCTCCCTCACC CTGTCTCCAACATCACGAAACGTGGAAGCATGTTACTGA
Transcript	>Hirsu2\|5420 ATGAGTTCCACATCCAGTGCGGCTCATACGCTGCACCCAGACCATATCAGTCCTCGCCACGTTACTTTCCTCGCC GTTGCCTCGACATTGACTGCACTAGCGACCACGTGCACTGTCTTGAGATTCGTCCAGCGCCTTTCTATAGGATTC TGGTGGGATGATTGGTTCATTCTCGCCGCTTCGGCCTTCGCAATTGGTAGCTTGGTGACAATTATTCTGTCCGCA ACTGTTGTGCACGCAGGCTACCACTTTGCTGAATATGCCATCTCAGAGATAAATATATTCATGAAGATTGCGCTG GCAAACAACATCATCTACAATGCGAGCATCAGCTTCTCCAAGGCTTCGGTCATTTACTTTTACTACCGCATATTT GGGACCTACCGTGCGCTTCGGCTTCAGCTACGCATTGTCAGCGGTTTGGTTGCCCTGAATTTCCTTGCCGCAGTA CTGGGCCTGGTTTTTGCCACCAGCCCGGTCCGGGCGCAATGGGACATTCTTGTTCCACATACCACTATCCACAAC AAGGCATTCTGGTCGTCAATGGCTATAATCAATATCTCGCTGGACATTGTTATTTTAGCCATTCCGCAGGCTCGT GTATGGCGCCTCACGCTTTCTTTTCGACGCAGAGTACTGGTATCCCTGGTCTTCTTGCTAGGAGCCTTCGTTATA ATAGCAAGCTGCGTCCGCATCATTTACATGCTCACGATCGACGTGAACGATGTCACTTGTGAGACCTCCCTCACC CTGTCTCCAACATCACGAAACGTGGAAGCATGTTACTGA
Gene	>Hirsu2\|5420 ATGAGTTCCACATCCAGTGCGGCTCATACGCTGCACCCAGACCATATCAGTCCTCGCCACGTTACTTTCCTCGCC GTTGCCTCGACATTGACTGCACTAGCGACCACGTGCACTGTCTTGAGATTCGTCCAGCGCCTTTCTATAGGATTC TGGTGGGATGATTGGTTCATTCTCGCCGCTTCGGCCTTCGCAATTGGTAGCTTGGTGACAATTATTCTGTCCGCA ACTGTTGTGCACGCAGGCTACCACTTTGCTGAATATGCCATCTCAGAGATAAATATATTCATGAAGGTAAGTTTG TCTCCTTCAGGCGTGCAGCGGCAATGGAACGCATGCAAGCACTGCACTCAATCAACGTCCGGCTGATGTGCTCCA TAAAGATTGCGCTGGCAAACAACATCATCTACAATGCGAGCATCAGCTTCTCCAAGGCTTCGGTCATTTACTTTT ACTACCGCATATTTGGGACCTACCGTGCGCTTCGGCTTCAGCTACGCATTGTCAGCGGTTTGGTTGCCCTGAATT TCCTTGCCGCAGTACTGGGCCTGGTTTTTGCCACCAGCCCGGTCCGGGCGCAATGGGACATTCTTGTTCCACATA CCACTATCCACAACAAGGCATTCTGGTCGTCAATGGCTATAATCAATATCTCGCTGGACATTGTTATTTTAGCCA TTCCGCAGGCTCGTGTATGGCGCCTCACGCTTTCTTTTCGACGCAGAGTACTGGTATCCCTGGTCTTCTTGCTAG GAGCCTTGTGAGTCAGTCCGCTTCGAGCAGCAGCCTTGTCTGACAAAAGACCAAAGAACGTTGAAGATGGGTGCT AACAGTATACGCATACAGCGTTATAATAGCAAGCTGCGTCCGCATCATTTACATGCTCACGATCGACGTGAACGA TGTCACTTGTGAGACCTCCCTCACCCTGTCTCCAACATCACGAAACGTGGAAGCATGTTACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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