Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5413
Gene name
LocationContig_2705:114..1653
Strand+
Gene length (bp)1539
Transcript length (bp)1539
Coding sequence length (bp)1539
Protein length (aa) 513

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05224 NDT80_PhoG NDT80 / PhoG like DNA-binding family 1.5E-42 129 327

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5413
MAHAQTHAQRTGAPHLGSHIGALDQYSTATPPFRRASEHLSRSPAFSGGPLRRHQLTTPQSPLPGFAPHAGARME
SGQYSARPGQVIVPPLQPVQTLGTLNYIDAAMTPIKVEISGIVDKGPFLSCDQEWTCYRRNYLACVCSYTLSPFC
YPNVPIQFTPAQSSNSASAQPYQVYGFAMCISAVVAENEQQSIELVQHTPKRDKGPISKPSKIPMAPKTSSSSHH
AINPYGDGPTMPGARGLYSEGLGGPPGGGGQQLPAEHTFERIQFKHATLNNGKRRAAQQYYHLIVELWADVGAHS
PEQYVKVAFRKSAKMIVRGRSPGHYQNERRGSQGNGPGGSAGTMGGYAAMGHMTDFNNSNAMLSGAGTGGYATTY
DNRGGVYGAARQHEMADEAMMPPDDGKPVDKAYQYYPGGSMHVYDGGHPEQRVDIYSQRSGPETVVSNSTSTMAP
DSKVKHEYDFGLLPRPFNNSAAAPTPRVPDQRPHEHYDGKATSGGYYPSIMTSSTGIHMTMA*
Coding >Hirsu2|5413
ATGGCACATGCCCAAACCCACGCACAGCGCACCGGAGCACCGCACTTAGGGTCCCATATCGGCGCCCTCGACCAA
TACTCGACCGCCACGCCGCCCTTTCGTAGAGCGTCAGAGCACCTGTCGCGGTCCCCGGCCTTCTCCGGAGGGCCA
CTGCGACGGCACCAGTTGACGACGCCTCAGAGCCCGCTGCCCGGGTTCGCCCCCCACGCCGGCGCAAGGATGGAA
TCCGGCCAGTACAGCGCCAGGCCGGGCCAGGTCATCGTCCCGCCGCTCCAGCCGGTGCAGACGCTGGGGACGCTC
AACTACATCGACGCGGCCATGACGCCGATCAAGGTGGAAATCTCGGGCATCGTGGACAAGGGCCCGTTTCTGTCG
TGCGATCAGGAGTGGACATGCTACCGGCGCAACTACCTGGCGTGCGTCTGCTCATACACTCTGAGCCCGTTCTGC
TACCCGAACGTCCCGATACAGTTCACGCCGGCGCAGTCTTCGAACTCGGCGTCTGCCCAGCCGTACCAAGTGTAC
GGGTTCGCCATGTGCATCTCGGCCGTGGTGGCGGAGAACGAGCAGCAGAGCATCGAGCTCGTCCAGCACACACCC
AAGAGAGATAAGGGTCCGATCAGCAAGCCGTCCAAGATCCCGATGGCGCCCAAGACCAGCTCGTCGTCGCACCAC
GCCATCAACCCGTACGGAGACGGACCCACCATGCCGGGCGCGAGAGGCTTATATTCCGAGGGGCTCGGAGGTCCG
CCGGGTGGCGGCGGCCAGCAGCTACCTGCCGAGCACACGTTTGAACGCATCCAGTTCAAGCACGCTACTCTGAAC
AACGGCAAACGGCGGGCGGCGCAGCAGTACTACCACCTGATTGTGGAACTGTGGGCGGACGTGGGCGCCCACAGC
CCCGAGCAGTACGTCAAGGTGGCCTTCCGCAAGTCGGCCAAGATGATCGTCCGCGGCCGGTCGCCGGGCCACTAC
CAGAACGAGAGACGGGGCAGCCAAGGCAATGGGCCGGGAGGTTCCGCGGGTACCATGGGCGGATACGCGGCAATG
GGCCACATGACCGACTTCAACAACTCGAACGCGATGCTCAGCGGGGCCGGCACGGGGGGTTACGCCACGACGTAC
GACAACCGCGGCGGCGTTTACGGCGCGGCGCGGCAGCACGAGATGGCGGACGAGGCTATGATGCCGCCGGATGAC
GGGAAGCCGGTCGACAAGGCCTATCAGTACTACCCCGGGGGGTCGATGCACGTCTACGACGGCGGCCACCCGGAG
CAGCGGGTCGACATTTACAGCCAGCGGAGCGGCCCCGAGACGGTCGTGTCCAACTCGACTTCGACCATGGCTCCT
GACAGCAAGGTCAAGCACGAGTACGACTTTGGCCTGCTGCCCCGGCCCTTCAACAACTCGGCCGCGGCGCCAACG
CCACGGGTGCCGGACCAACGGCCGCACGAACACTATGACGGCAAAGCGACCTCGGGCGGCTACTACCCTTCCATT
ATGACGTCGTCGACCGGAATTCATATGACGATGGCATGA
Transcript >Hirsu2|5413
ATGGCACATGCCCAAACCCACGCACAGCGCACCGGAGCACCGCACTTAGGGTCCCATATCGGCGCCCTCGACCAA
TACTCGACCGCCACGCCGCCCTTTCGTAGAGCGTCAGAGCACCTGTCGCGGTCCCCGGCCTTCTCCGGAGGGCCA
CTGCGACGGCACCAGTTGACGACGCCTCAGAGCCCGCTGCCCGGGTTCGCCCCCCACGCCGGCGCAAGGATGGAA
TCCGGCCAGTACAGCGCCAGGCCGGGCCAGGTCATCGTCCCGCCGCTCCAGCCGGTGCAGACGCTGGGGACGCTC
AACTACATCGACGCGGCCATGACGCCGATCAAGGTGGAAATCTCGGGCATCGTGGACAAGGGCCCGTTTCTGTCG
TGCGATCAGGAGTGGACATGCTACCGGCGCAACTACCTGGCGTGCGTCTGCTCATACACTCTGAGCCCGTTCTGC
TACCCGAACGTCCCGATACAGTTCACGCCGGCGCAGTCTTCGAACTCGGCGTCTGCCCAGCCGTACCAAGTGTAC
GGGTTCGCCATGTGCATCTCGGCCGTGGTGGCGGAGAACGAGCAGCAGAGCATCGAGCTCGTCCAGCACACACCC
AAGAGAGATAAGGGTCCGATCAGCAAGCCGTCCAAGATCCCGATGGCGCCCAAGACCAGCTCGTCGTCGCACCAC
GCCATCAACCCGTACGGAGACGGACCCACCATGCCGGGCGCGAGAGGCTTATATTCCGAGGGGCTCGGAGGTCCG
CCGGGTGGCGGCGGCCAGCAGCTACCTGCCGAGCACACGTTTGAACGCATCCAGTTCAAGCACGCTACTCTGAAC
AACGGCAAACGGCGGGCGGCGCAGCAGTACTACCACCTGATTGTGGAACTGTGGGCGGACGTGGGCGCCCACAGC
CCCGAGCAGTACGTCAAGGTGGCCTTCCGCAAGTCGGCCAAGATGATCGTCCGCGGCCGGTCGCCGGGCCACTAC
CAGAACGAGAGACGGGGCAGCCAAGGCAATGGGCCGGGAGGTTCCGCGGGTACCATGGGCGGATACGCGGCAATG
GGCCACATGACCGACTTCAACAACTCGAACGCGATGCTCAGCGGGGCCGGCACGGGGGGTTACGCCACGACGTAC
GACAACCGCGGCGGCGTTTACGGCGCGGCGCGGCAGCACGAGATGGCGGACGAGGCTATGATGCCGCCGGATGAC
GGGAAGCCGGTCGACAAGGCCTATCAGTACTACCCCGGGGGGTCGATGCACGTCTACGACGGCGGCCACCCGGAG
CAGCGGGTCGACATTTACAGCCAGCGGAGCGGCCCCGAGACGGTCGTGTCCAACTCGACTTCGACCATGGCTCCT
GACAGCAAGGTCAAGCACGAGTACGACTTTGGCCTGCTGCCCCGGCCCTTCAACAACTCGGCCGCGGCGCCAACG
CCACGGGTGCCGGACCAACGGCCGCACGAACACTATGACGGCAAAGCGACCTCGGGCGGCTACTACCCTTCCATT
ATGACGTCGTCGACCGGAATTCATATGACGATGGCATGA
Gene >Hirsu2|5413
ATGGCACATGCCCAAACCCACGCACAGCGCACCGGAGCACCGCACTTAGGGTCCCATATCGGCGCCCTCGACCAA
TACTCGACCGCCACGCCGCCCTTTCGTAGAGCGTCAGAGCACCTGTCGCGGTCCCCGGCCTTCTCCGGAGGGCCA
CTGCGACGGCACCAGTTGACGACGCCTCAGAGCCCGCTGCCCGGGTTCGCCCCCCACGCCGGCGCAAGGATGGAA
TCCGGCCAGTACAGCGCCAGGCCGGGCCAGGTCATCGTCCCGCCGCTCCAGCCGGTGCAGACGCTGGGGACGCTC
AACTACATCGACGCGGCCATGACGCCGATCAAGGTGGAAATCTCGGGCATCGTGGACAAGGGCCCGTTTCTGTCG
TGCGATCAGGAGTGGACATGCTACCGGCGCAACTACCTGGCGTGCGTCTGCTCATACACTCTGAGCCCGTTCTGC
TACCCGAACGTCCCGATACAGTTCACGCCGGCGCAGTCTTCGAACTCGGCGTCTGCCCAGCCGTACCAAGTGTAC
GGGTTCGCCATGTGCATCTCGGCCGTGGTGGCGGAGAACGAGCAGCAGAGCATCGAGCTCGTCCAGCACACACCC
AAGAGAGATAAGGGTCCGATCAGCAAGCCGTCCAAGATCCCGATGGCGCCCAAGACCAGCTCGTCGTCGCACCAC
GCCATCAACCCGTACGGAGACGGACCCACCATGCCGGGCGCGAGAGGCTTATATTCCGAGGGGCTCGGAGGTCCG
CCGGGTGGCGGCGGCCAGCAGCTACCTGCCGAGCACACGTTTGAACGCATCCAGTTCAAGCACGCTACTCTGAAC
AACGGCAAACGGCGGGCGGCGCAGCAGTACTACCACCTGATTGTGGAACTGTGGGCGGACGTGGGCGCCCACAGC
CCCGAGCAGTACGTCAAGGTGGCCTTCCGCAAGTCGGCCAAGATGATCGTCCGCGGCCGGTCGCCGGGCCACTAC
CAGAACGAGAGACGGGGCAGCCAAGGCAATGGGCCGGGAGGTTCCGCGGGTACCATGGGCGGATACGCGGCAATG
GGCCACATGACCGACTTCAACAACTCGAACGCGATGCTCAGCGGGGCCGGCACGGGGGGTTACGCCACGACGTAC
GACAACCGCGGCGGCGTTTACGGCGCGGCGCGGCAGCACGAGATGGCGGACGAGGCTATGATGCCGCCGGATGAC
GGGAAGCCGGTCGACAAGGCCTATCAGTACTACCCCGGGGGGTCGATGCACGTCTACGACGGCGGCCACCCGGAG
CAGCGGGTCGACATTTACAGCCAGCGGAGCGGCCCCGAGACGGTCGTGTCCAACTCGACTTCGACCATGGCTCCT
GACAGCAAGGTCAAGCACGAGTACGACTTTGGCCTGCTGCCCCGGCCCTTCAACAACTCGGCCGCGGCGCCAACG
CCACGGGTGCCGGACCAACGGCCGCACGAACACTATGACGGCAAAGCGACCTCGGGCGGCTACTACCCTTCCATT
ATGACGTCGTCGACCGGAATTCATATGACGATGGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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