Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5405
Gene name
LocationContig_270:8045..9550
Strand-
Gene length (bp)1505
Transcript length (bp)1047
Coding sequence length (bp)1047
Protein length (aa) 349

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 45 67 22
3 82 104 22
4 125 147 22
5 162 184 22
6 205 227 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5405
MAPWAARGVPTAGRIIAVVLSLAATTVLTLFLTQRVLAIRAWRRLPLVVWLVFAIYSDSYVFVAATALLQHALGV
NAGPRTCDSAILLCLVCYVTTKFIYLFLVEKAHIMRPTPKRRLRSKLYALNAFGVLGVYVVVVLLNFIFRIAEMR
HGSCVIGMRGLAMVPLIAFDAVVNVYLTIMFLIPLRKLYSFQHLPRSPATLRLRSVAFRTFCGAVCTLLSSILYP
PFSLPTWRSASSARSSAHARDRNLGVLMALDGEPGWVCLMCCNSDILFSAIVIQWVTSKDHAGSSSTPSSSRGAG
GGSGARPRAVVVTTTVSTETAAGDGRGHGSRTTVVAGADGDGDACLAV*
Coding >Hirsu2|5405
ATGGCACCGTGGGCCGCGCGCGGCGTGCCGACGGCCGGGCGCATCATCGCCGTCGTCCTCTCGCTCGCGGCCACG
ACGGTCCTCACCCTCTTCCTCACGCAGCGGGTGCTCGCGATACGGGCCTGGCGCCGCCTCCCGCTCGTCGTCTGG
CTCGTCTTCGCCATCTACAGCGACTCGTACGTCTTCGTGGCCGCGACGGCCCTGCTGCAGCACGCGCTGGGCGTC
AACGCCGGGCCGCGGACGTGCGACAGCGCCATCCTGCTCTGCCTCGTCTGCTACGTCACCACCAAATTCATCTAC
CTCTTCCTCGTGGAGAAGGCGCACATCATGCGCCCTACGCCGAAGCGCCGGCTGCGCTCCAAGCTCTACGCGCTC
AACGCGTTTGGCGTCCTGGGCGTCTACGTCGTCGTCGTCCTGCTCAACTTCATCTTCCGCATCGCCGAGATGCGC
CATGGGTCGTGCGTCATCGGCATGCGCGGCTTGGCCATGGTGCCGCTGATTGCGTTCGATGCCGTTGTCAACGTC
TACCTGACCATCATGTTCCTCATCCCGCTGCGCAAGCTGTACTCGTTCCAGCACCTCCCGCGCAGCCCGGCGACG
CTGCGCCTGCGCTCCGTCGCCTTCCGCACCTTTTGCGGCGCCGTCTGCACCCTGCTCAGCAGCATCCTGTACCCG
CCGTTCTCCCTCCCTACTTGGCGCTCCGCCTCCTCTGCGCGCTCGTCCGCTCACGCTCGGGACAGGAACCTGGGC
GTGCTGATGGCGCTCGACGGCGAGCCGGGCTGGGTGTGCCTGATGTGCTGCAACAGCGACATCCTCTTCTCGGCC
ATTGTCATCCAGTGGGTCACGTCCAAGGACCACGCCGGCTCGTCCAGCACGCCGTCGTCGTCGCGCGGCGCCGGC
GGCGGCAGCGGCGCTCGCCCGCGCGCCGTCGTCGTCACGACTACCGTCAGCACCGAGACGGCTGCCGGCGACGGC
CGCGGCCATGGCTCGCGTACCACTGTTGTTGCGGGCGCGGATGGCGATGGCGACGCCTGCCTGGCCGTGTAG
Transcript >Hirsu2|5405
ATGGCACCGTGGGCCGCGCGCGGCGTGCCGACGGCCGGGCGCATCATCGCCGTCGTCCTCTCGCTCGCGGCCACG
ACGGTCCTCACCCTCTTCCTCACGCAGCGGGTGCTCGCGATACGGGCCTGGCGCCGCCTCCCGCTCGTCGTCTGG
CTCGTCTTCGCCATCTACAGCGACTCGTACGTCTTCGTGGCCGCGACGGCCCTGCTGCAGCACGCGCTGGGCGTC
AACGCCGGGCCGCGGACGTGCGACAGCGCCATCCTGCTCTGCCTCGTCTGCTACGTCACCACCAAATTCATCTAC
CTCTTCCTCGTGGAGAAGGCGCACATCATGCGCCCTACGCCGAAGCGCCGGCTGCGCTCCAAGCTCTACGCGCTC
AACGCGTTTGGCGTCCTGGGCGTCTACGTCGTCGTCGTCCTGCTCAACTTCATCTTCCGCATCGCCGAGATGCGC
CATGGGTCGTGCGTCATCGGCATGCGCGGCTTGGCCATGGTGCCGCTGATTGCGTTCGATGCCGTTGTCAACGTC
TACCTGACCATCATGTTCCTCATCCCGCTGCGCAAGCTGTACTCGTTCCAGCACCTCCCGCGCAGCCCGGCGACG
CTGCGCCTGCGCTCCGTCGCCTTCCGCACCTTTTGCGGCGCCGTCTGCACCCTGCTCAGCAGCATCCTGTACCCG
CCGTTCTCCCTCCCTACTTGGCGCTCCGCCTCCTCTGCGCGCTCGTCCGCTCACGCTCGGGACAGGAACCTGGGC
GTGCTGATGGCGCTCGACGGCGAGCCGGGCTGGGTGTGCCTGATGTGCTGCAACAGCGACATCCTCTTCTCGGCC
ATTGTCATCCAGTGGGTCACGTCCAAGGACCACGCCGGCTCGTCCAGCACGCCGTCGTCGTCGCGCGGCGCCGGC
GGCGGCAGCGGCGCTCGCCCGCGCGCCGTCGTCGTCACGACTACCGTCAGCACCGAGACGGCTGCCGGCGACGGC
CGCGGCCATGGCTCGCGTACCACTGTTGTTGCGGGCGCGGATGGCGATGGCGACGCCTGCCTGGCCGTGTAG
Gene >Hirsu2|5405
ATGGCACCGTGGGCCGCGCGCGGCGTGCCGACGGCCGGGCGCATCATCGCCGTCGTCCTCTCGCTCGCGGCCACG
ACGGTCCTCACCCTCTTCCTCAGTAGGTCGCGCTGCGCCGCTGGCCGGGGGCTCGGGCTGAAGACGTGGACAGCG
CAGCGGGTGCTCGCGATACGGGCCTGGCGCCGCCTCCCGCTCGTCGTCTGGCGTACGCCCCCAACAGGATGCGGC
GCTTCCGTGGGCTGACGCGCCGACCAGTCGTCTTCGCCATCTACAGCGACTCGTACGTCTTCGTGGCCGCGACGG
CCCTGCTGCAGCACGCGCTGGGCGTCAACGCCGGGCCGCGGACGTGCGACAGCGCCATCCTGCTCTGCCTCGTCT
GCTACGTCACCACCAAAGTCTCCCCTCCCTCTCTCGACTCTCGTTCTCTCCACCGCGCCCGCTGACGACGAGGGT
AGATCGTGCGTTAGGGGGGCGCGCCCGCCCACGACGACCGGACCGCCGCTGACGCGCATCCAGTTCATCTACCTC
TTCCTCGTGGAGAAGGCGGTACGTGTGCGGCTCGTGGCGCGGACAGCGGCGCTGACGCCCGCGGCAGCACATCAT
GCGCCCTACGCCGAAGCGCCGGCTGCGCTCCAAGCTCTACGCGCTCAACGCGTTTGGCGTCCTGGGCGTCTACGT
CGTCGTCGTCCTGCTCAACTTCATCTTGTGCGTCGCTGCTCTCGCGACGCGGGGCGCGTTTGCTGACGAGGCGTG
CCGCAGCCGCATCGCCGAGATGCGCCATGGGTCGTGCGTCATCGGCATGCGCGGCTTGGCCATGGTGCCGCTGAT
TGCGTTCGATGCCGTTGTCAACGTCTACCTGACCATCATGTTCCTCATCCCGCTGCGCAGTAAGGACACACACAC
ACACACCTCTGTACACGTCTCTCTGTGTGTCGGCAGACGCTGACGCCCGGCAGAGCTGTACTCGTTCCAGCACCT
CCCGCGCAGCCCGGCGACGCTGCGCCTGCGCTCCGTCGCCTTCCGCACCTTTTGCGGCGCCGTCTGCACCCTGCT
CAGCAGCATCCTGTACCCGCCGTTCTCCCTCCCTACTTGGCGCTCCGCCTCCTCTGCGCGCTCGTCCGCTCACGC
TCGGGACAGGAACCTGGGCGTGCTGATGGCGCTCGACGGCGAGCCGGGCTGGGTGTGCCTGATGTGCTGCAACAG
CGACAGTCGGTTTTCCCTCGATGTCTGTCTTGCCTTCTCCCTGGCCGGTGCTCTGACGCCGAGCCGCAGTCCTCT
TCTCGGCCATTGTCATCCAGTGGGTCACGTCCAAGGACCACGCCGGCTCGTCCAGCACGCCGTCGTCGTCGCGCG
GCGCCGGCGGCGGCAGCGGCGCTCGCCCGCGCGCCGTCGTCGTCACGACTACCGTCAGCACCGAGACGGCTGCCG
GCGACGGCCGCGGCCATGGCTCGCGTACCACTGTTGTTGCGGGCGCGGATGGCGATGGCGACGCCTGCCTGGCCG
TGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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