Protein ID | Hirsu2|5404 |
Gene name | |
Location | Contig_270:6062..7109 |
Strand | + |
Gene length (bp) | 1047 |
Transcript length (bp) | 1047 |
Coding sequence length (bp) | 1047 |
Protein length (aa) | 349 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11790 | Glyco_hydro_cc | Glycosyl hydrolase catalytic core | 3.8E-38 | 113 | 343 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q09788|ASL1_SCHPO | Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=asl1 PE=1 SV=1 | 114 | 347 | 6.0E-09 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1137 | 0.0769 | 0.9496 | 0.1635 | 0.0315 | 0.0025 | 0.1033 | 0.1766 | 0.1175 | 0.0006 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.98453 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH128 | 1.5E-43 | 129 | 344 |
Orthofinder run ID | 4 |
Orthogroup | 3102 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5404 MFIKNIVAVAATAALAEQALALNSHRHLHRRRPQDNPAPIIQTIYETVTADGNPVETPSPQVYADIAPPPPQPQP TTMATYAKPGDAPPTASTPASPDSGDVCGGNPFTQPIGLAYDDVNLVNTFPELAKVGWASNWNSDPGNLNPSIQF VPTLRNDPDCLKRWEGDLAKAVERGSKAAQSLNEPDISSQANMTPRQAAEFHVKYMNRAGEMGLKVSAPSVSNSE KPNQGLDYLRQWVEVCKELKCTYHFCTVHWYSPLKYKETLYDHISQAQKICGKPVVLGEFGLVDDAGQHIDSKSL LEEAIPKFKGNSCLWGYAPFYCAVGGNQGRLLDSPAKLSDTGKALVSS* |
Coding | >Hirsu2|5404 ATGTTTATCAAAAACATCGTGGCCGTCGCCGCCACTGCCGCTCTCGCCGAGCAGGCTCTGGCCCTCAACTCGCAC CGCCACCTTCACCGACGCCGGCCCCAAGACAACCCGGCCCCCATCATTCAGACCATCTACGAGACCGTCACCGCC GATGGCAACCCTGTCGAGACGCCGTCGCCCCAGGTGTATGCGGACATCGCTCCCCCGCCCCCGCAACCGCAGCCG ACGACCATGGCCACGTACGCCAAGCCTGGCGATGCCCCCCCTACCGCCTCGACGCCGGCCTCGCCTGACAGCGGA GACGTTTGCGGGGGCAACCCCTTCACCCAACCCATCGGCCTGGCGTACGACGATGTCAATCTCGTCAACACCTTC CCCGAGCTGGCCAAGGTCGGCTGGGCCTCCAACTGGAACTCGGATCCCGGGAACCTCAACCCGAGCATCCAGTTC GTGCCCACGCTGCGCAACGATCCCGACTGCCTCAAGAGGTGGGAGGGGGACTTGGCCAAAGCCGTCGAAAGGGGC TCCAAGGCCGCCCAGAGCTTGAACGAGCCCGACATCAGCTCGCAGGCCAACATGACACCCCGGCAGGCGGCCGAG TTCCACGTCAAGTACATGAACCGGGCCGGCGAAATGGGGCTCAAGGTCAGCGCGCCGAGCGTGTCCAACAGCGAA AAGCCCAACCAGGGCCTCGACTATCTCAGGCAATGGGTCGAGGTGTGCAAGGAGCTCAAGTGCACCTACCACTTC TGCACCGTCCACTGGTACTCGCCGCTCAAGTACAAAGAGACGCTCTACGACCACATCAGCCAGGCCCAAAAGATT TGCGGCAAGCCCGTGGTACTGGGCGAGTTCGGCCTCGTCGACGACGCCGGCCAACACATCGACTCGAAGAGCCTG CTCGAGGAGGCGATTCCCAAGTTCAAGGGGAACTCGTGCCTCTGGGGCTACGCGCCCTTCTACTGCGCCGTCGGC GGCAACCAGGGCCGCCTGCTGGATTCGCCCGCGAAGCTCAGCGACACGGGCAAGGCCCTGGTCAGCAGCTAG |
Transcript | >Hirsu2|5404 ATGTTTATCAAAAACATCGTGGCCGTCGCCGCCACTGCCGCTCTCGCCGAGCAGGCTCTGGCCCTCAACTCGCAC CGCCACCTTCACCGACGCCGGCCCCAAGACAACCCGGCCCCCATCATTCAGACCATCTACGAGACCGTCACCGCC GATGGCAACCCTGTCGAGACGCCGTCGCCCCAGGTGTATGCGGACATCGCTCCCCCGCCCCCGCAACCGCAGCCG ACGACCATGGCCACGTACGCCAAGCCTGGCGATGCCCCCCCTACCGCCTCGACGCCGGCCTCGCCTGACAGCGGA GACGTTTGCGGGGGCAACCCCTTCACCCAACCCATCGGCCTGGCGTACGACGATGTCAATCTCGTCAACACCTTC CCCGAGCTGGCCAAGGTCGGCTGGGCCTCCAACTGGAACTCGGATCCCGGGAACCTCAACCCGAGCATCCAGTTC GTGCCCACGCTGCGCAACGATCCCGACTGCCTCAAGAGGTGGGAGGGGGACTTGGCCAAAGCCGTCGAAAGGGGC TCCAAGGCCGCCCAGAGCTTGAACGAGCCCGACATCAGCTCGCAGGCCAACATGACACCCCGGCAGGCGGCCGAG TTCCACGTCAAGTACATGAACCGGGCCGGCGAAATGGGGCTCAAGGTCAGCGCGCCGAGCGTGTCCAACAGCGAA AAGCCCAACCAGGGCCTCGACTATCTCAGGCAATGGGTCGAGGTGTGCAAGGAGCTCAAGTGCACCTACCACTTC TGCACCGTCCACTGGTACTCGCCGCTCAAGTACAAAGAGACGCTCTACGACCACATCAGCCAGGCCCAAAAGATT TGCGGCAAGCCCGTGGTACTGGGCGAGTTCGGCCTCGTCGACGACGCCGGCCAACACATCGACTCGAAGAGCCTG CTCGAGGAGGCGATTCCCAAGTTCAAGGGGAACTCGTGCCTCTGGGGCTACGCGCCCTTCTACTGCGCCGTCGGC GGCAACCAGGGCCGCCTGCTGGATTCGCCCGCGAAGCTCAGCGACACGGGCAAGGCCCTGGTCAGCAGCTAG |
Gene | >Hirsu2|5404 ATGTTTATCAAAAACATCGTGGCCGTCGCCGCCACTGCCGCTCTCGCCGAGCAGGCTCTGGCCCTCAACTCGCAC CGCCACCTTCACCGACGCCGGCCCCAAGACAACCCGGCCCCCATCATTCAGACCATCTACGAGACCGTCACCGCC GATGGCAACCCTGTCGAGACGCCGTCGCCCCAGGTGTATGCGGACATCGCTCCCCCGCCCCCGCAACCGCAGCCG ACGACCATGGCCACGTACGCCAAGCCTGGCGATGCCCCCCCTACCGCCTCGACGCCGGCCTCGCCTGACAGCGGA GACGTTTGCGGGGGCAACCCCTTCACCCAACCCATCGGCCTGGCGTACGACGATGTCAATCTCGTCAACACCTTC CCCGAGCTGGCCAAGGTCGGCTGGGCCTCCAACTGGAACTCGGATCCCGGGAACCTCAACCCGAGCATCCAGTTC GTGCCCACGCTGCGCAACGATCCCGACTGCCTCAAGAGGTGGGAGGGGGACTTGGCCAAAGCCGTCGAAAGGGGC TCCAAGGCCGCCCAGAGCTTGAACGAGCCCGACATCAGCTCGCAGGCCAACATGACACCCCGGCAGGCGGCCGAG TTCCACGTCAAGTACATGAACCGGGCCGGCGAAATGGGGCTCAAGGTCAGCGCGCCGAGCGTGTCCAACAGCGAA AAGCCCAACCAGGGCCTCGACTATCTCAGGCAATGGGTCGAGGTGTGCAAGGAGCTCAAGTGCACCTACCACTTC TGCACCGTCCACTGGTACTCGCCGCTCAAGTACAAAGAGACGCTCTACGACCACATCAGCCAGGCCCAAAAGATT TGCGGCAAGCCCGTGGTACTGGGCGAGTTCGGCCTCGTCGACGACGCCGGCCAACACATCGACTCGAAGAGCCTG CTCGAGGAGGCGATTCCCAAGTTCAAGGGGAACTCGTGCCTCTGGGGCTACGCGCCCTTCTACTGCGCCGTCGGC GGCAACCAGGGCCGCCTGCTGGATTCGCCCGCGAAGCTCAGCGACACGGGCAAGGCCCTGGTCAGCAGCTAG |