Protein ID | Hirsu2|5398 |
Gene name | |
Location | Contig_27:45179..45808 |
Strand | - |
Gene length (bp) | 629 |
Transcript length (bp) | 549 |
Coding sequence length (bp) | 549 |
Protein length (aa) | 183 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1067 | 0.0491 | 0.962 | 0.0699 | 0.0704 | 0.0084 | 0.0987 | 0.1368 | 0.0738 | 0.0038 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 17 | 0.999653 |
Orthofinder run ID | 4 |
Orthogroup | 3099 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5398 MKFSAILVSLAAVLAAAAPNLVSTQDKSIESISNATALGVDVWGPMPQDAVRAPDGYYTAEPGTKAWAWIRAQID LTPDHNSKSREQKRQQYANIGIGMFVGDNCTGQAAWYDNVIYTYLYFTPINMFSVGISSRGLRSNERLDFNRRAG SNLCGTYLYTAASDTPSKGTFLSVNDGGDEKV* |
Coding | >Hirsu2|5398 ATGAAGTTCTCAGCTATCCTCGTTTCCCTTGCGGCCGTGCTCGCAGCTGCAGCTCCAAACTTGGTCTCGACCCAA GACAAAAGTATCGAGTCCATTTCCAATGCGACTGCCTTGGGTGTCGACGTTTGGGGACCGATGCCCCAGGATGCC GTACGCGCCCCTGACGGGTATTACACCGCGGAGCCCGGGACCAAGGCGTGGGCTTGGATCAGGGCCCAGATCGAC CTCACACCCGACCATAATTCCAAATCTCGGGAGCAGAAGCGGCAGCAATATGCCAACATCGGTATTGGCATGTTT GTCGGTGATAACTGCACTGGTCAGGCGGCCTGGTATGACAATGTGATTTATACCTACCTGTACTTCACCCCGATC AATATGTTCAGCGTCGGAATCAGCAGCCGTGGACTGCGCAGCAACGAACGCTTGGACTTCAACCGCAGGGCTGGC AGCAACCTCTGCGGCACATATCTCTACACTGCTGCCAGCGATACGCCTAGTAAGGGCACCTTTCTGTCCGTAAAT GATGGAGGTGACGAGAAAGTCTAA |
Transcript | >Hirsu2|5398 ATGAAGTTCTCAGCTATCCTCGTTTCCCTTGCGGCCGTGCTCGCAGCTGCAGCTCCAAACTTGGTCTCGACCCAA GACAAAAGTATCGAGTCCATTTCCAATGCGACTGCCTTGGGTGTCGACGTTTGGGGACCGATGCCCCAGGATGCC GTACGCGCCCCTGACGGGTATTACACCGCGGAGCCCGGGACCAAGGCGTGGGCTTGGATCAGGGCCCAGATCGAC CTCACACCCGACCATAATTCCAAATCTCGGGAGCAGAAGCGGCAGCAATATGCCAACATCGGTATTGGCATGTTT GTCGGTGATAACTGCACTGGTCAGGCGGCCTGGTATGACAATGTGATTTATACCTACCTGTACTTCACCCCGATC AATATGTTCAGCGTCGGAATCAGCAGCCGTGGACTGCGCAGCAACGAACGCTTGGACTTCAACCGCAGGGCTGGC AGCAACCTCTGCGGCACATATCTCTACACTGCTGCCAGCGATACGCCTAGTAAGGGCACCTTTCTGTCCGTAAAT GATGGAGGTGACGAGAAAGTCTAA |
Gene | >Hirsu2|5398 ATGAAGTTCTCAGCTATCCTCGTTTCCCTTGCGGCCGTGCTCGCAGCTGCAGCTCCAAACTTGGTCTCGACCCAA GACAAAAGTATCGAGTCCATTTCCAATGCGACTGCCTTGGGTGTCGACGTTTGGGGACCGATGCCCCAGGATGCC GTACGCGCCCCTGACGGGTATTACACCGCGGAGCCCGGGACCAAGGCGTGGGCTTGGATCAGGGCCCAGATCGAC CTCACACCCGACCATAATTCCAAATCTCGGGAGCAGAAGCGGCAGCAATATGCCAACATCGGTATTGGCATGTTT GTCGGTGATAACTGTAAGACCACGAAGACGTTTTCTCCATCTCTCCTTCCGGTGTGTATGCTCTCTAAACATTGC TCGCACGGCGCACATCAGGCACTGGTCAGGCGGCCTGGTATGACAATGTGATTTATACCTACCTGTACTTCACCC CGATCAATATGTTCAGCGTCGGAATCAGCAGCCGTGGACTGCGCAGCAACGAACGCTTGGACTTCAACCGCAGGG CTGGCAGCAACCTCTGCGGCACATATCTCTACACTGCTGCCAGCGATACGCCTAGTAAGGGCACCTTTCTGTCCG TAAATGATGGAGGTGACGAGAAAGTCTAA |