Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5394
Gene name
LocationContig_27:31718..32769
Strand+
Gene length (bp)1051
Transcript length (bp)972
Coding sequence length (bp)972
Protein length (aa) 324

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 15 35 20
2 42 64 22
3 69 91 22
4 123 141 18
5 161 183 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5394
MSLCPAQDHSDMLGLGIRVASYVQWLAALCFQHIGPESLPEIRLLGLLLSGGITIGLLVQVAYGRLDAAAIYISL
LLATGSHMFLVPVYVWRAVMCWDPFWNPLTWYGEEELRTYKVLKFAQIVTASSVGVWFFTTYLPGLDRDCLQYGF
LFSKTQLDHNAAFAAFNAILYLAICIVCTVTAASKVCCRIKSRPPKRRLGSKRTREHIKCMHAPHTLSDLLVFAM
LVAAAELSVQWNELSTAVQLDTSAQLIPLLVSIGIVVRVTYLHVAEEGDDSNAGKSRTVQAASGNAPRSVQWWDA
EGNPWAPRRPPPTHGAGGTNQVR*
Coding >Hirsu2|5394
ATGAGTCTCTGCCCGGCACAGGACCATTCGGACATGTTGGGCCTGGGCATCCGAGTCGCGTCGTACGTGCAGTGG
CTCGCCGCCCTTTGCTTCCAACACATCGGCCCGGAGTCGCTGCCGGAGATACGCCTGCTCGGCCTCCTGCTCTCG
GGAGGCATCACCATCGGCCTGCTTGTCCAGGTTGCCTACGGACGTCTCGACGCGGCGGCCATCTACATCTCCCTG
CTCCTCGCCACGGGCTCGCACATGTTCCTGGTGCCCGTCTACGTCTGGCGAGCCGTCATGTGTTGGGACCCCTTC
TGGAACCCCCTCACGTGGTATGGGGAAGAGGAGCTGCGCACCTACAAGGTGCTGAAATTTGCGCAGATCGTGACG
GCCTCGTCGGTCGGTGTCTGGTTCTTTACCACGTATCTGCCGGGGCTGGACCGGGACTGTCTCCAGTACGGCTTC
CTCTTCAGCAAGACCCAGCTCGACCACAACGCCGCCTTTGCCGCCTTCAACGCCATCCTCTACCTCGCCATATGC
ATCGTCTGCACCGTCACTGCGGCGTCCAAAGTTTGCTGCAGGATCAAATCGCGCCCGCCCAAGAGGCGCCTTGGT
AGCAAGCGCACCAGGGAACACATCAAATGCATGCACGCGCCACACACGCTCTCCGACCTCCTCGTTTTCGCCATG
CTCGTCGCCGCGGCTGAGCTCTCCGTACAGTGGAACGAGCTGTCGACGGCCGTCCAGCTCGACACGAGCGCACAG
CTGATCCCGTTGCTTGTCAGCATCGGCATCGTCGTTCGAGTGACGTATCTGCACGTGGCCGAAGAAGGCGACGAC
AGCAACGCGGGAAAATCGCGGACTGTGCAGGCTGCGAGCGGGAACGCGCCTCGCTCGGTCCAGTGGTGGGATGCA
GAAGGAAACCCGTGGGCGCCACGGCGTCCCCCGCCGACCCATGGCGCTGGCGGGACGAATCAAGTCAGGTGA
Transcript >Hirsu2|5394
ATGAGTCTCTGCCCGGCACAGGACCATTCGGACATGTTGGGCCTGGGCATCCGAGTCGCGTCGTACGTGCAGTGG
CTCGCCGCCCTTTGCTTCCAACACATCGGCCCGGAGTCGCTGCCGGAGATACGCCTGCTCGGCCTCCTGCTCTCG
GGAGGCATCACCATCGGCCTGCTTGTCCAGGTTGCCTACGGACGTCTCGACGCGGCGGCCATCTACATCTCCCTG
CTCCTCGCCACGGGCTCGCACATGTTCCTGGTGCCCGTCTACGTCTGGCGAGCCGTCATGTGTTGGGACCCCTTC
TGGAACCCCCTCACGTGGTATGGGGAAGAGGAGCTGCGCACCTACAAGGTGCTGAAATTTGCGCAGATCGTGACG
GCCTCGTCGGTCGGTGTCTGGTTCTTTACCACGTATCTGCCGGGGCTGGACCGGGACTGTCTCCAGTACGGCTTC
CTCTTCAGCAAGACCCAGCTCGACCACAACGCCGCCTTTGCCGCCTTCAACGCCATCCTCTACCTCGCCATATGC
ATCGTCTGCACCGTCACTGCGGCGTCCAAAGTTTGCTGCAGGATCAAATCGCGCCCGCCCAAGAGGCGCCTTGGT
AGCAAGCGCACCAGGGAACACATCAAATGCATGCACGCGCCACACACGCTCTCCGACCTCCTCGTTTTCGCCATG
CTCGTCGCCGCGGCTGAGCTCTCCGTACAGTGGAACGAGCTGTCGACGGCCGTCCAGCTCGACACGAGCGCACAG
CTGATCCCGTTGCTTGTCAGCATCGGCATCGTCGTTCGAGTGACGTATCTGCACGTGGCCGAAGAAGGCGACGAC
AGCAACGCGGGAAAATCGCGGACTGTGCAGGCTGCGAGCGGGAACGCGCCTCGCTCGGTCCAGTGGTGGGATGCA
GAAGGAAACCCGTGGGCGCCACGGCGTCCCCCGCCGACCCATGGCGCTGGCGGGACGAATCAAGTCAGGTGA
Gene >Hirsu2|5394
ATGAGTCTCTGCCCGGCACAGGACCATTCGGACATGTTGGGCCTGGGCATCCGAGTCGCGTCGTACGTGCAGTGG
CTCGCCGCCCTTTGCTTCCAACACATCGGCCCGGAGTCGCTGCCGGAGATACGCCTGCTCGGCCTCCTGCTCTCG
GGAGGCATCACCATCGGCCTGCTTGTCCAGGTTGCCTACGGACGTCTCGACGCGGCGGCCATCTACATCTCCCTG
CTCCTCGCCACGGGCTCGCACATGTTCCTGGTGCCCGTCTACGTCTGGCGAGCCGTCATGTGTTGGGACCCCTTC
TGGAACCCCCTCACGTGGTATGGGGAAGAGGAGCTGCGCACCTACAAGGTGCTGAAATTTGCGCAGATCGTGACG
GCCTCGTCGGTCGGTGTCTGGTTCTTTACCACGTATCTGCCGGGGCTGGACCGGGACTGTCTCCAGTACGGCTTC
CTCTTCAGCAAGACCCAGCTCGACCACAACGCCGCCTTTGCCGCCTTCAACGCCATCCTCTACCTCGCCATATGC
ATCGTCTGCACCGTCACTGCGGCGTCCAAAGTTTGCTGCAGGATCAAATCGCGCCCGCCCAAGAGGCGCCTTGGT
AGCAAGCGCACCAGGCATGTTGCTGCATCGACAGTGAAGGCTCCCCTTGTCGAAACCTCTGGCGCTGACCCTAAG
ACTGGTATCGCGTACTAGGGAACACATCAAATGCATGCACGCGCCACACACGCTCTCCGACCTCCTCGTTTTCGC
CATGCTCGTCGCCGCGGCTGAGCTCTCCGTACAGTGGAACGAGCTGTCGACGGCCGTCCAGCTCGACACGAGCGC
ACAGCTGATCCCGTTGCTTGTCAGCATCGGCATCGTCGTTCGAGTGACGTATCTGCACGTGGCCGAAGAAGGCGA
CGACAGCAACGCGGGAAAATCGCGGACTGTGCAGGCTGCGAGCGGGAACGCGCCTCGCTCGGTCCAGTGGTGGGA
TGCAGAAGGAAACCCGTGGGCGCCACGGCGTCCCCCGCCGACCCATGGCGCTGGCGGGACGAATCAAGTCAGGTG
A

© 2020 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail