Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5383
Gene name
LocationContig_27:2592..3861
Strand-
Gene length (bp)1269
Transcript length (bp)1110
Coding sequence length (bp)1110
Protein length (aa) 370

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10067 DUF2306 Predicted membrane protein (DUF2306) 7.4E-13 85 214

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 84 106 22
3 119 136 17
4 146 168 22
5 181 203 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5383
MVTVDRPPANAFVATARRAYNPLGFSKGYNFILWVICGGALTGFVLARLMYLNIDGIFCGSGSGGAPPGECYYYQ
GKGIERPGIILHLAGILPAGLLAVFQFLPVIRHKVLLIHRISGYAIILLSIIGVIGIGMIARHGLGGGVDLQTAV
GLSTIIFVSCKAIAFYNIKKLQIEQHRAWMLRAWVIASFIITMRIIGLIMSYIIGRPSGDYYKVHPCYIVDAMFK
HNQTTVEALHPACRAFYSGADPHVQVAVHADMTAGRPDTITSAFNLSFGPSAWLACALHIFAAELYLRLTPAEAE
RLRRVSYQRQLEAGMKNPGNAGLTAQRLGDAEPWFPQRNALRTNLTKNETQTETETETLGTRQSQAASD*
Coding >Hirsu2|5383
ATGGTGACCGTCGACAGACCGCCGGCAAACGCCTTCGTGGCAACTGCACGCCGCGCCTACAACCCGCTGGGATTT
TCCAAGGGCTACAACTTCATCCTATGGGTCATCTGCGGCGGCGCCCTGACGGGCTTCGTCCTGGCACGCCTCATG
TATCTCAACATTGACGGCATCTTCTGCGGCTCCGGCTCCGGCGGCGCTCCTCCCGGCGAGTGCTACTACTACCAA
GGCAAAGGCATTGAGCGGCCAGGCATCATCCTGCACTTGGCGGGCATCCTCCCGGCTGGCCTGCTTGCCGTCTTC
CAATTCCTGCCCGTCATCCGCCACAAGGTCCTGCTCATCCACCGTATCAGCGGCTACGCCATCATCCTCCTGTCC
ATCATCGGCGTCATCGGCATCGGCATGATCGCCCGGCACGGCTTGGGCGGCGGGGTTGATTTGCAGACTGCCGTC
GGACTGTCGACCATCATCTTCGTCTCGTGCAAGGCCATTGCCTTTTACAACATCAAAAAGCTTCAGATCGAGCAG
CATCGTGCTTGGATGCTGAGAGCTTGGGTTATCGCCAGCTTCATCATCACCATGCGCATCATCGGCCTCATCATG
TCCTACATCATCGGGAGGCCCAGCGGCGACTACTACAAGGTCCACCCTTGCTACATTGTCGACGCAATGTTCAAG
CACAACCAGACGACGGTCGAAGCCCTGCACCCGGCCTGCCGAGCCTTCTACTCGGGGGCCGACCCTCACGTCCAG
GTCGCTGTGCACGCCGACATGACGGCCGGTCGCCCCGACACGATCACGTCTGCTTTCAACCTGAGCTTCGGCCCC
AGCGCCTGGCTGGCCTGCGCCCTGCACATCTTTGCCGCCGAGCTGTACCTGCGCCTGACGCCGGCCGAGGCCGAG
CGCCTCCGCCGCGTCTCGTACCAGCGCCAGCTCGAGGCGGGCATGAAGAACCCGGGCAACGCTGGCCTCACTGCC
CAGCGTCTCGGAGACGCGGAGCCTTGGTTCCCCCAGCGAAACGCACTCCGTACCAATTTGACCAAGAACGAGACT
CAGACGGAGACGGAGACGGAGACGCTGGGGACACGGCAGTCGCAGGCAGCTTCTGACTAG
Transcript >Hirsu2|5383
ATGGTGACCGTCGACAGACCGCCGGCAAACGCCTTCGTGGCAACTGCACGCCGCGCCTACAACCCGCTGGGATTT
TCCAAGGGCTACAACTTCATCCTATGGGTCATCTGCGGCGGCGCCCTGACGGGCTTCGTCCTGGCACGCCTCATG
TATCTCAACATTGACGGCATCTTCTGCGGCTCCGGCTCCGGCGGCGCTCCTCCCGGCGAGTGCTACTACTACCAA
GGCAAAGGCATTGAGCGGCCAGGCATCATCCTGCACTTGGCGGGCATCCTCCCGGCTGGCCTGCTTGCCGTCTTC
CAATTCCTGCCCGTCATCCGCCACAAGGTCCTGCTCATCCACCGTATCAGCGGCTACGCCATCATCCTCCTGTCC
ATCATCGGCGTCATCGGCATCGGCATGATCGCCCGGCACGGCTTGGGCGGCGGGGTTGATTTGCAGACTGCCGTC
GGACTGTCGACCATCATCTTCGTCTCGTGCAAGGCCATTGCCTTTTACAACATCAAAAAGCTTCAGATCGAGCAG
CATCGTGCTTGGATGCTGAGAGCTTGGGTTATCGCCAGCTTCATCATCACCATGCGCATCATCGGCCTCATCATG
TCCTACATCATCGGGAGGCCCAGCGGCGACTACTACAAGGTCCACCCTTGCTACATTGTCGACGCAATGTTCAAG
CACAACCAGACGACGGTCGAAGCCCTGCACCCGGCCTGCCGAGCCTTCTACTCGGGGGCCGACCCTCACGTCCAG
GTCGCTGTGCACGCCGACATGACGGCCGGTCGCCCCGACACGATCACGTCTGCTTTCAACCTGAGCTTCGGCCCC
AGCGCCTGGCTGGCCTGCGCCCTGCACATCTTTGCCGCCGAGCTGTACCTGCGCCTGACGCCGGCCGAGGCCGAG
CGCCTCCGCCGCGTCTCGTACCAGCGCCAGCTCGAGGCGGGCATGAAGAACCCGGGCAACGCTGGCCTCACTGCC
CAGCGTCTCGGAGACGCGGAGCCTTGGTTCCCCCAGCGAAACGCACTCCGTACCAATTTGACCAAGAACGAGACT
CAGACGGAGACGGAGACGGAGACGCTGGGGACACGGCAGTCGCAGGCAGCTTCTGACTAG
Gene >Hirsu2|5383
ATGGTGACCGTCGACAGACCGCCGGCAAACGCCTTCGTGGCAACTGCACGCCGCGCCTACAACCCGCTGGGATTT
TCCAAGGGCTACAACTTCATCCTATGGGTCATCTGCGGCGGCGCCCTGACGGGCTTCGTCCTGGCACGCCTCATG
TATCTCAACATTGACGGCATCTTCTGCGGCTCCGGCTCCGGCGGCGCTCCTCCCGGCGAGTGCTACTACTACCAA
GGCAAAGGCATTGAGCGGCCAGGCATCATCCTGCACTTGGCGGGCATCCTCCCGGCTGGCCTGCTTGCCGTCTTC
CAATTCCTGCCCGTCATCCGCCACAAGGTCCTGCTCATCCACCGTATCAGCGGCTACGCCATCATCCTCCTGTCC
ATCATCGGCGTCATCGGCATCGGCATGATCGCCCGGCACGGCTTGGGCGGCGGGGTTGATTTGCAGACTGCCGTC
GGACTGTCGACCATCATCTTCGTCTCGTGCAAGGCCATTGCCTTTTACAACATCAAAAAGCTTCAGATCGAGCAG
CATCGTGCTTGGATGCTGAGAGCTTGGGTTATCGTGAGTCTCCTTCCCTCCCTGTACCTTTCCCCCTGTCTTTCG
CCCCATGTTCTTCGGGGCTACCGACGCTTCGCGCCGTGGCTCCCTTCCCAGCCATCTTTCACGCTTGCCGAGTCC
CCAATCGGAGGAAACCGTCTGGTTTCTGACTTTGACGACCAGGCCAGCTTCATCATCACCATGCGCATCATCGGC
CTCATCATGTCCTACATCATCGGGAGGCCCAGCGGCGACTACTACAAGGTCCACCCTTGCTACATTGTCGACGCA
ATGTTCAAGCACAACCAGACGACGGTCGAAGCCCTGCACCCGGCCTGCCGAGCCTTCTACTCGGGGGCCGACCCT
CACGTCCAGGTCGCTGTGCACGCCGACATGACGGCCGGTCGCCCCGACACGATCACGTCTGCTTTCAACCTGAGC
TTCGGCCCCAGCGCCTGGCTGGCCTGCGCCCTGCACATCTTTGCCGCCGAGCTGTACCTGCGCCTGACGCCGGCC
GAGGCCGAGCGCCTCCGCCGCGTCTCGTACCAGCGCCAGCTCGAGGCGGGCATGAAGAACCCGGGCAACGCTGGC
CTCACTGCCCAGCGTCTCGGAGACGCGGAGCCTTGGTTCCCCCAGCGAAACGCACTCCGTACCAATTTGACCAAG
AACGAGACTCAGACGGAGACGGAGACGGAGACGCTGGGGACACGGCAGTCGCAGGCAGCTTCTGACTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail