Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|5372
Gene name
Location	Contig_269:9358..9889
Strand	-
Gene length (bp)	531
Transcript length (bp)	531
Coding sequence length (bp)	531
Protein length (aa)	177

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF11915	DUF3433	Protein of unknown function (DUF3433)	6.9E-17	92	160

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 70	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	47	69	22
2	89	111	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|5372 MSGQLPGRLDEDSDGVGRGNVVGDDEQQSQQLTESENGWKPRSMGAPVLVSFAVTSLLLAACVGGLALRSSTYGG LALSASLHDIPGSAIMAYKYVPIVLGILYSLAWAWVDQDVKRMQPWFELSRPQGAKGNDSLFLSYPHDFVAFAPW KAAKKRSVPVNSLNILFRGSVLPSGS*
Coding	>Hirsu2\|5372 ATGTCTGGCCAGCTGCCCGGCCGTCTCGATGAGGACTCAGACGGCGTGGGCCGCGGAAACGTCGTCGGTGACGAT GAGCAGCAGTCGCAACAGCTGACAGAGTCCGAGAACGGGTGGAAGCCTCGCTCCATGGGCGCACCGGTCCTGGTC TCCTTCGCCGTCACCTCTCTTCTGTTGGCCGCCTGCGTCGGGGGCCTGGCGCTGCGGAGCAGCACCTACGGCGGG CTCGCGCTATCCGCGTCTCTCCACGACATCCCCGGATCCGCCATCATGGCGTATAAATACGTTCCTATCGTCCTC GGCATCCTCTATAGTCTTGCTTGGGCCTGGGTAGACCAGGACGTCAAGCGAATGCAGCCGTGGTTCGAGCTATCG CGGCCACAGGGGGCCAAGGGCAATGACTCGCTGTTTTTGAGCTATCCTCACGACTTCGTGGCTTTTGCGCCTTGG AAGGCGGCCAAGAAAAGGTCAGTTCCTGTTAACTCTCTCAACATTCTTTTCCGAGGATCTGTGCTTCCGTCTGGA TCGTGA
Transcript	>Hirsu2\|5372 ATGTCTGGCCAGCTGCCCGGCCGTCTCGATGAGGACTCAGACGGCGTGGGCCGCGGAAACGTCGTCGGTGACGAT GAGCAGCAGTCGCAACAGCTGACAGAGTCCGAGAACGGGTGGAAGCCTCGCTCCATGGGCGCACCGGTCCTGGTC TCCTTCGCCGTCACCTCTCTTCTGTTGGCCGCCTGCGTCGGGGGCCTGGCGCTGCGGAGCAGCACCTACGGCGGG CTCGCGCTATCCGCGTCTCTCCACGACATCCCCGGATCCGCCATCATGGCGTATAAATACGTTCCTATCGTCCTC GGCATCCTCTATAGTCTTGCTTGGGCCTGGGTAGACCAGGACGTCAAGCGAATGCAGCCGTGGTTCGAGCTATCG CGGCCACAGGGGGCCAAGGGCAATGACTCGCTGTTTTTGAGCTATCCTCACGACTTCGTGGCTTTTGCGCCTTGG AAGGCGGCCAAGAAAAGGTCAGTTCCTGTTAACTCTCTCAACATTCTTTTCCGAGGATCTGTGCTTCCGTCTGGA TCGTGA
Gene	>Hirsu2\|5372 ATGTCTGGCCAGCTGCCCGGCCGTCTCGATGAGGACTCAGACGGCGTGGGCCGCGGAAACGTCGTCGGTGACGAT GAGCAGCAGTCGCAACAGCTGACAGAGTCCGAGAACGGGTGGAAGCCTCGCTCCATGGGCGCACCGGTCCTGGTC TCCTTCGCCGTCACCTCTCTTCTGTTGGCCGCCTGCGTCGGGGGCCTGGCGCTGCGGAGCAGCACCTACGGCGGG CTCGCGCTATCCGCGTCTCTCCACGACATCCCCGGATCCGCCATCATGGCGTATAAATACGTTCCTATCGTCCTC GGCATCCTCTATAGTCTTGCTTGGGCCTGGGTAGACCAGGACGTCAAGCGAATGCAGCCGTGGTTCGAGCTATCG CGGCCACAGGGGGCCAAGGGCAATGACTCGCTGTTTTTGAGCTATCCTCACGACTTCGTGGCTTTTGCGCCTTGG AAGGCGGCCAAGAAAAGGTCAGTTCCTGTTAACTCTCTCAACATTCTTTTCCGAGGATCTGTGCTTCCGTCTGGA TCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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