Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5372
Gene name
LocationContig_269:9358..9889
Strand-
Gene length (bp)531
Transcript length (bp)531
Coding sequence length (bp)531
Protein length (aa) 177

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11915 DUF3433 Protein of unknown function (DUF3433) 4.5E-17 92 160

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.5

Transmembrane Domains

Domain # Start End Length
1 47 69 22
2 89 111 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5372
MSGQLPGRLDEDSDGVGRGNVVGDDEQQSQQLTESENGWKPRSMGAPVLVSFAVTSLLLAACVGGLALRSSTYGG
LALSASLHDIPGSAIMAYKYVPIVLGILYSLAWAWVDQDVKRMQPWFELSRPQGAKGNDSLFLSYPHDFVAFAPW
KAAKKRSVPVNSLNILFRGSVLPSGS*
Coding >Hirsu2|5372
ATGTCTGGCCAGCTGCCCGGCCGTCTCGATGAGGACTCAGACGGCGTGGGCCGCGGAAACGTCGTCGGTGACGAT
GAGCAGCAGTCGCAACAGCTGACAGAGTCCGAGAACGGGTGGAAGCCTCGCTCCATGGGCGCACCGGTCCTGGTC
TCCTTCGCCGTCACCTCTCTTCTGTTGGCCGCCTGCGTCGGGGGCCTGGCGCTGCGGAGCAGCACCTACGGCGGG
CTCGCGCTATCCGCGTCTCTCCACGACATCCCCGGATCCGCCATCATGGCGTATAAATACGTTCCTATCGTCCTC
GGCATCCTCTATAGTCTTGCTTGGGCCTGGGTAGACCAGGACGTCAAGCGAATGCAGCCGTGGTTCGAGCTATCG
CGGCCACAGGGGGCCAAGGGCAATGACTCGCTGTTTTTGAGCTATCCTCACGACTTCGTGGCTTTTGCGCCTTGG
AAGGCGGCCAAGAAAAGGTCAGTTCCTGTTAACTCTCTCAACATTCTTTTCCGAGGATCTGTGCTTCCGTCTGGA
TCGTGA
Transcript >Hirsu2|5372
ATGTCTGGCCAGCTGCCCGGCCGTCTCGATGAGGACTCAGACGGCGTGGGCCGCGGAAACGTCGTCGGTGACGAT
GAGCAGCAGTCGCAACAGCTGACAGAGTCCGAGAACGGGTGGAAGCCTCGCTCCATGGGCGCACCGGTCCTGGTC
TCCTTCGCCGTCACCTCTCTTCTGTTGGCCGCCTGCGTCGGGGGCCTGGCGCTGCGGAGCAGCACCTACGGCGGG
CTCGCGCTATCCGCGTCTCTCCACGACATCCCCGGATCCGCCATCATGGCGTATAAATACGTTCCTATCGTCCTC
GGCATCCTCTATAGTCTTGCTTGGGCCTGGGTAGACCAGGACGTCAAGCGAATGCAGCCGTGGTTCGAGCTATCG
CGGCCACAGGGGGCCAAGGGCAATGACTCGCTGTTTTTGAGCTATCCTCACGACTTCGTGGCTTTTGCGCCTTGG
AAGGCGGCCAAGAAAAGGTCAGTTCCTGTTAACTCTCTCAACATTCTTTTCCGAGGATCTGTGCTTCCGTCTGGA
TCGTGA
Gene >Hirsu2|5372
ATGTCTGGCCAGCTGCCCGGCCGTCTCGATGAGGACTCAGACGGCGTGGGCCGCGGAAACGTCGTCGGTGACGAT
GAGCAGCAGTCGCAACAGCTGACAGAGTCCGAGAACGGGTGGAAGCCTCGCTCCATGGGCGCACCGGTCCTGGTC
TCCTTCGCCGTCACCTCTCTTCTGTTGGCCGCCTGCGTCGGGGGCCTGGCGCTGCGGAGCAGCACCTACGGCGGG
CTCGCGCTATCCGCGTCTCTCCACGACATCCCCGGATCCGCCATCATGGCGTATAAATACGTTCCTATCGTCCTC
GGCATCCTCTATAGTCTTGCTTGGGCCTGGGTAGACCAGGACGTCAAGCGAATGCAGCCGTGGTTCGAGCTATCG
CGGCCACAGGGGGCCAAGGGCAATGACTCGCTGTTTTTGAGCTATCCTCACGACTTCGTGGCTTTTGCGCCTTGG
AAGGCGGCCAAGAAAAGGTCAGTTCCTGTTAACTCTCTCAACATTCTTTTCCGAGGATCTGTGCTTCCGTCTGGA
TCGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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