Protein ID | Hirsu2|5371 |
Gene name | |
Location | Contig_269:6020..9307 |
Strand | - |
Gene length (bp) | 3287 |
Transcript length (bp) | 3234 |
Coding sequence length (bp) | 3234 |
Protein length (aa) | 1078 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11915 | DUF3433 | Protein of unknown function (DUF3433) | 3.2E-11 | 550 | 636 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 17 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 383 | 405 | 22 |
2 | 508 | 525 | 17 |
3 | 962 | 981 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5371 MVIIIFLLAPLQTAFMAPGPAVCQDSLNITTRSRLAPLPRQIELLDTDILAYAYTVSWFGRPYPAFTTPDYALLP FYIEPDVDSRRKPANLTARTTKLWAELTCWPADVTPAFPRRIFNYLAGLNETYYEFNISNGQGCVTQFPAVVGAE TPYGIRYAGYTAFIRNPGYTPYQISVTSGVPSLSESRCGNETIHQSALAWVKLVHKNETSFRLGESSAIDLQITG RFCRSHYYKQEVLVTVGAGDSRPHESSLQPISERLPLGDDDFNATAFEILVNDNDVRRSVRGYNGGFEPFGQTTR RPFPAMEWSYGGGFDMINSVFAGKNLSIAELSDPKRLEMEFDKSLKYLFTLSVYHTLVNYTNFADSNASATFPLR GIIVSGPFSALIGGILIFNALISLALLYLCRTSSCYLRFNPNSILRTSYICNNRHTIQLFLEFDNADEKELRLAL GDGVFRLARRRRLKNELYLERISSPETKEPICSSSKGQHEPDSENRDIRPFEMTRRAGVILFLVLAGATATITWL KIEEFKQGGLPRPSETLEVLRILENYIPSNFATILKAFWNLLNKDLCVLQPLKDLYTGRALPSRSIATTYSAIPS SLAFWRAVKARHHLLTLLCSTSLVANLLGIGLGTLFHEDDVVARYSHRFEPLISPIFHSQSLLDYRHEYTGASSH EMYYVLSTMTSNTALPPWSSKDWFFLPHRVVPGAGTSPDTTYTLNTRGFGVHANCTAMSSLPVPHLWSSWGCTSA TQKAAELLYMSNYPSRRGKSLEISASSIIETFKGRPCPPFDFIVGWVRAFLDNTTRSNNTALYCRPFFQTAMFDV IIDERGKVHSYRQTSKDIESSLNYPTFDRDSQAVFLYAMEYNDRVPQSAQWHTGILLRDWMTTLIAALKGSRGFI DPASPPPDPFEMMPAVEAVYRRGFSFLLGRHWQQFFEPGRANDSITGLRLTHETRIFLDKKAFVISIAVLSANMI ITIVFYTRPAIRIPRLPTSIASTIAYVAPSRLGAMWNDEDLEKRTFSYGRYIGLDGKPHTGIEMDPHVTLVKPSS DDGKTWNVKGIFRRRKLAARSSDGGPK* |
Coding | >Hirsu2|5371 ATGGTAATCATAATATTCCTCCTCGCCCCGCTGCAGACTGCCTTTATGGCTCCGGGTCCCGCGGTCTGCCAGGAT TCCCTCAACATCACGACCAGATCTCGGCTCGCGCCGCTTCCTCGCCAGATCGAACTCCTGGATACCGACATTCTG GCATATGCCTACACGGTCAGCTGGTTCGGGCGGCCCTACCCGGCCTTCACTACTCCCGATTATGCCCTCCTTCCC TTCTACATCGAGCCAGATGTTGATTCGAGGAGAAAGCCGGCCAATCTGACGGCTCGGACGACCAAATTATGGGCG GAACTCACTTGCTGGCCAGCTGACGTGACGCCCGCGTTCCCCAGGAGGATCTTTAATTACCTAGCCGGTTTGAAT GAAACATACTACGAGTTCAACATATCCAATGGCCAAGGGTGTGTGACTCAGTTCCCCGCGGTGGTCGGAGCGGAA ACGCCGTACGGCATACGCTACGCCGGATACACGGCGTTTATACGCAACCCCGGATACACGCCGTATCAGATCTCA GTTACCTCGGGAGTGCCCAGCCTGAGCGAGTCGCGTTGTGGCAATGAAACGATCCATCAGTCTGCCCTGGCGTGG GTGAAGTTGGTGCATAAGAATGAGACAAGTTTCCGGCTGGGGGAATCTTCAGCAATCGACCTTCAAATCACAGGC CGCTTCTGTCGCTCCCACTACTACAAACAGGAGGTTCTGGTCACCGTGGGGGCCGGCGACTCGAGGCCACACGAG AGTTCGCTGCAACCCATCTCGGAGCGGCTCCCGCTAGGTGACGACGATTTCAACGCGACGGCGTTCGAAATACTG GTGAACGACAACGACGTCAGGCGTTCGGTCAGAGGCTATAATGGCGGTTTTGAGCCCTTCGGTCAGACCACTCGC AGACCCTTCCCGGCCATGGAATGGAGCTACGGTGGTGGCTTCGATATGATCAATTCCGTTTTCGCGGGCAAAAAT CTCTCGATAGCCGAGCTCTCGGATCCCAAAAGACTCGAAATGGAGTTTGATAAAAGCTTAAAATATCTCTTCACC CTTTCCGTTTACCATACGCTTGTCAACTATACGAACTTTGCGGATTCTAACGCCTCCGCAACCTTTCCACTACGG GGAATCATCGTTAGCGGACCTTTCTCTGCTCTTATCGGGGGCATATTGATATTCAATGCTCTTATATCTCTGGCG CTTCTTTATCTTTGCCGAACGTCTTCGTGCTACCTTCGATTTAACCCAAACTCGATTTTACGGACTTCCTATATC TGCAATAATCGTCATACGATTCAACTCTTCTTGGAATTCGATAATGCGGATGAGAAGGAACTACGATTGGCCTTG GGGGATGGAGTTTTTCGACTCGCACGCCGCCGCCGCCTAAAAAACGAGCTTTATCTTGAGAGAATCTCTTCTCCG GAAACGAAGGAGCCGATATGCTCATCCTCAAAGGGTCAGCATGAACCGGATAGTGAGAACCGAGATATTCGACCT TTTGAGATGACTCGAAGAGCAGGCGTGATACTGTTCTTAGTATTGGCGGGAGCGACTGCCACAATTACGTGGCTA AAGATTGAAGAATTCAAGCAAGGAGGATTACCTCGCCCATCGGAAACACTAGAGGTGTTGAGGATCCTAGAGAAC TACATTCCGAGCAACTTTGCTACAATCCTCAAGGCCTTCTGGAATCTTCTCAACAAGGACTTGTGTGTCTTGCAA CCCCTGAAAGATCTATATACCGGCAGGGCGCTTCCGAGCAGGAGCATCGCAACGACATATTCTGCTATTCCATCG TCGTTGGCGTTTTGGCGCGCTGTCAAGGCACGCCACCATCTACTCACTTTGCTGTGCTCCACCTCTCTGGTTGCA AACCTGCTCGGCATTGGCCTCGGAACCCTTTTTCACGAAGACGATGTGGTAGCGAGATACTCTCATCGTTTTGAG CCGCTGATTTCGCCTATATTTCACTCCCAGTCTCTTCTGGACTACCGCCACGAGTACACTGGCGCCAGCAGCCAC GAAATGTACTACGTGCTTAGTACCATGACATCCAACACTGCGCTTCCTCCCTGGTCGTCAAAAGATTGGTTCTTC TTGCCGCACCGCGTCGTACCAGGTGCGGGAACCTCGCCAGATACCACCTATACGCTGAACACTCGCGGCTTTGGT GTCCATGCCAACTGCACGGCCATGTCGTCCTTGCCAGTGCCGCATTTATGGTCTTCTTGGGGTTGCACGAGCGCC ACACAAAAGGCTGCTGAGCTGCTTTATATGTCAAACTATCCATCAAGACGTGGCAAGTCACTCGAAATTTCGGCT TCAAGCATTATCGAGACTTTCAAGGGAAGACCTTGTCCTCCGTTTGACTTCATAGTCGGCTGGGTCAGAGCCTTT CTCGATAATACAACAAGGTCGAATAACACGGCATTATACTGCCGGCCCTTTTTCCAGACGGCCATGTTCGATGTC ATCATCGACGAGCGAGGAAAGGTCCATTCCTACAGGCAAACGAGCAAGGACATTGAATCAAGCTTAAACTACCCG ACCTTTGATCGGGATTCTCAGGCGGTATTTCTATATGCCATGGAGTATAACGATAGGGTGCCACAAAGCGCCCAG TGGCATACAGGAATCCTTCTTCGAGATTGGATGACGACTTTGATCGCGGCTCTGAAAGGTTCGCGAGGGTTTATT GATCCAGCCAGTCCGCCGCCCGATCCCTTCGAGATGATGCCGGCTGTTGAAGCCGTCTACCGCCGAGGCTTCTCC TTCTTACTCGGCCGCCACTGGCAGCAGTTCTTCGAACCAGGCCGAGCGAACGACTCTATCACAGGACTCAGGCTG ACACACGAGACGCGGATTTTCCTCGACAAGAAGGCCTTCGTCATTAGTATTGCAGTATTATCGGCAAACATGATT ATTACCATCGTCTTTTATACAAGGCCAGCTATACGAATCCCACGCTTGCCGACAAGTATCGCGTCGACGATTGCA TACGTGGCGCCTAGCCGGCTCGGGGCGATGTGGAACGATGAGGATTTGGAGAAGAGGACGTTCAGCTATGGGCGG TACATAGGGCTCGATGGCAAGCCGCATACCGGGATCGAAATGGATCCCCATGTGACGCTCGTCAAGCCGTCGTCC GACGACGGGAAGACGTGGAACGTCAAGGGGATCTTCAGGCGGCGCAAGTTGGCCGCTCGCTCGAGTGATGGAGGG CCGAAGTAG |
Transcript | >Hirsu2|5371 ATGGTAATCATAATATTCCTCCTCGCCCCGCTGCAGACTGCCTTTATGGCTCCGGGTCCCGCGGTCTGCCAGGAT TCCCTCAACATCACGACCAGATCTCGGCTCGCGCCGCTTCCTCGCCAGATCGAACTCCTGGATACCGACATTCTG GCATATGCCTACACGGTCAGCTGGTTCGGGCGGCCCTACCCGGCCTTCACTACTCCCGATTATGCCCTCCTTCCC TTCTACATCGAGCCAGATGTTGATTCGAGGAGAAAGCCGGCCAATCTGACGGCTCGGACGACCAAATTATGGGCG GAACTCACTTGCTGGCCAGCTGACGTGACGCCCGCGTTCCCCAGGAGGATCTTTAATTACCTAGCCGGTTTGAAT GAAACATACTACGAGTTCAACATATCCAATGGCCAAGGGTGTGTGACTCAGTTCCCCGCGGTGGTCGGAGCGGAA ACGCCGTACGGCATACGCTACGCCGGATACACGGCGTTTATACGCAACCCCGGATACACGCCGTATCAGATCTCA GTTACCTCGGGAGTGCCCAGCCTGAGCGAGTCGCGTTGTGGCAATGAAACGATCCATCAGTCTGCCCTGGCGTGG GTGAAGTTGGTGCATAAGAATGAGACAAGTTTCCGGCTGGGGGAATCTTCAGCAATCGACCTTCAAATCACAGGC CGCTTCTGTCGCTCCCACTACTACAAACAGGAGGTTCTGGTCACCGTGGGGGCCGGCGACTCGAGGCCACACGAG AGTTCGCTGCAACCCATCTCGGAGCGGCTCCCGCTAGGTGACGACGATTTCAACGCGACGGCGTTCGAAATACTG GTGAACGACAACGACGTCAGGCGTTCGGTCAGAGGCTATAATGGCGGTTTTGAGCCCTTCGGTCAGACCACTCGC AGACCCTTCCCGGCCATGGAATGGAGCTACGGTGGTGGCTTCGATATGATCAATTCCGTTTTCGCGGGCAAAAAT CTCTCGATAGCCGAGCTCTCGGATCCCAAAAGACTCGAAATGGAGTTTGATAAAAGCTTAAAATATCTCTTCACC CTTTCCGTTTACCATACGCTTGTCAACTATACGAACTTTGCGGATTCTAACGCCTCCGCAACCTTTCCACTACGG GGAATCATCGTTAGCGGACCTTTCTCTGCTCTTATCGGGGGCATATTGATATTCAATGCTCTTATATCTCTGGCG CTTCTTTATCTTTGCCGAACGTCTTCGTGCTACCTTCGATTTAACCCAAACTCGATTTTACGGACTTCCTATATC TGCAATAATCGTCATACGATTCAACTCTTCTTGGAATTCGATAATGCGGATGAGAAGGAACTACGATTGGCCTTG GGGGATGGAGTTTTTCGACTCGCACGCCGCCGCCGCCTAAAAAACGAGCTTTATCTTGAGAGAATCTCTTCTCCG GAAACGAAGGAGCCGATATGCTCATCCTCAAAGGGTCAGCATGAACCGGATAGTGAGAACCGAGATATTCGACCT TTTGAGATGACTCGAAGAGCAGGCGTGATACTGTTCTTAGTATTGGCGGGAGCGACTGCCACAATTACGTGGCTA AAGATTGAAGAATTCAAGCAAGGAGGATTACCTCGCCCATCGGAAACACTAGAGGTGTTGAGGATCCTAGAGAAC TACATTCCGAGCAACTTTGCTACAATCCTCAAGGCCTTCTGGAATCTTCTCAACAAGGACTTGTGTGTCTTGCAA CCCCTGAAAGATCTATATACCGGCAGGGCGCTTCCGAGCAGGAGCATCGCAACGACATATTCTGCTATTCCATCG TCGTTGGCGTTTTGGCGCGCTGTCAAGGCACGCCACCATCTACTCACTTTGCTGTGCTCCACCTCTCTGGTTGCA AACCTGCTCGGCATTGGCCTCGGAACCCTTTTTCACGAAGACGATGTGGTAGCGAGATACTCTCATCGTTTTGAG CCGCTGATTTCGCCTATATTTCACTCCCAGTCTCTTCTGGACTACCGCCACGAGTACACTGGCGCCAGCAGCCAC GAAATGTACTACGTGCTTAGTACCATGACATCCAACACTGCGCTTCCTCCCTGGTCGTCAAAAGATTGGTTCTTC TTGCCGCACCGCGTCGTACCAGGTGCGGGAACCTCGCCAGATACCACCTATACGCTGAACACTCGCGGCTTTGGT GTCCATGCCAACTGCACGGCCATGTCGTCCTTGCCAGTGCCGCATTTATGGTCTTCTTGGGGTTGCACGAGCGCC ACACAAAAGGCTGCTGAGCTGCTTTATATGTCAAACTATCCATCAAGACGTGGCAAGTCACTCGAAATTTCGGCT TCAAGCATTATCGAGACTTTCAAGGGAAGACCTTGTCCTCCGTTTGACTTCATAGTCGGCTGGGTCAGAGCCTTT CTCGATAATACAACAAGGTCGAATAACACGGCATTATACTGCCGGCCCTTTTTCCAGACGGCCATGTTCGATGTC ATCATCGACGAGCGAGGAAAGGTCCATTCCTACAGGCAAACGAGCAAGGACATTGAATCAAGCTTAAACTACCCG ACCTTTGATCGGGATTCTCAGGCGGTATTTCTATATGCCATGGAGTATAACGATAGGGTGCCACAAAGCGCCCAG TGGCATACAGGAATCCTTCTTCGAGATTGGATGACGACTTTGATCGCGGCTCTGAAAGGTTCGCGAGGGTTTATT GATCCAGCCAGTCCGCCGCCCGATCCCTTCGAGATGATGCCGGCTGTTGAAGCCGTCTACCGCCGAGGCTTCTCC TTCTTACTCGGCCGCCACTGGCAGCAGTTCTTCGAACCAGGCCGAGCGAACGACTCTATCACAGGACTCAGGCTG ACACACGAGACGCGGATTTTCCTCGACAAGAAGGCCTTCGTCATTAGTATTGCAGTATTATCGGCAAACATGATT ATTACCATCGTCTTTTATACAAGGCCAGCTATACGAATCCCACGCTTGCCGACAAGTATCGCGTCGACGATTGCA TACGTGGCGCCTAGCCGGCTCGGGGCGATGTGGAACGATGAGGATTTGGAGAAGAGGACGTTCAGCTATGGGCGG TACATAGGGCTCGATGGCAAGCCGCATACCGGGATCGAAATGGATCCCCATGTGACGCTCGTCAAGCCGTCGTCC GACGACGGGAAGACGTGGAACGTCAAGGGGATCTTCAGGCGGCGCAAGTTGGCCGCTCGCTCGAGTGATGGAGGG CCGAAGTAG |
Gene | >Hirsu2|5371 ATGGTAATCATAATATTCCTCCTCGCCCCGCTGCAGACTGCCTTTATGGCTCCGGGTCCCGCGGTCTGCCAGGAT TCCCTCAACATCACGACCAGATCTCGGCTCGCGCCGCTTCCTCGCCAGATCGAACTCCTGGATACCGACATTCTG GCATATGCCTACACGGTCAGCTGGTTCGGGCGGCCCTACCCGGCCTTCACTACTCCCGATTATGCCCTCCTTCCC TTCTACATCGAGCCAGATGTTGATTCGAGGAGAAAGCCGGCCAATCTGACGGCTCGGACGACCAAATTATGGGCG GAACTCACTTGCTGGCCAGCTGACGTGACGCCCGCGTTCCCCAGGAGGATCTTTAATTACCTAGCCGGTTTGAAT GAAACATACTACGAGTTCAACATATCCAATGGCCAAGGGTGTGTGACTCAGTTCCCCGCGGTGGTCGGAGCGGAA ACGCCGTACGGCATACGCTACGCCGGATACACGGCGTTTATACGCAACCCCGGATACACGCCGTATCAGATCTCA GTTACCTCGGGAGTGCCCAGCCTGAGCGAGTCGCGTTGTGGCAATGAAACGATCCATCAGTCTGCCCTGGCGTGG GTGAAGTTGGTGCATAAGAATGAGACAAGTTTCCGGCTGGGGGAATCTTCAGCAATCGACCTTCAAATCACAGGC CGCTTCTGTCGCTCCCACTACTACAAACAGGAGGTTCTGGTCACCGTGGGGGCCGGCGACTCGAGGCCACACGAG AGTTCGCTGCAACCCATCTCGGAGCGGCTCCCGCTAGGTGACGACGATTTCAACGCGACGGCGTTCGAAATACTG GTGAACGACAACGACGTCAGGCGTTCGGTCAGAGGCTATAATGGCGGTTTTGAGCCCTTCGGTCAGACCACTCGC AGACCCTTCCCGGCCATGGAATGGAGCTACGGTGGTGGCTTCGATATGATCAATTCCGTTTTCGCGGGCAAAAAT CTCTCGATAGCCGAGCTCTCGGATCCCAAAAGACTCGAAATGGAGTTTGATAAAAGCTTAAAATATCTCTTCACC CTTTCCGTTTACCATACGCTTGTCAACTATACGAACTTTGCGGATTCTAACGCCTCCGCAACCTTTCCACTACGG GGAATCATCGTTAGCGGACCTTTCTCTGCTCTTATCGGGGGCATATTGATATTCAATGCTCTTATATCTCTGGCG CTTCTTTATCTTTGCCGAACGTCTTCGTGCTACCTTCGATTTAACCCAAACTCGATTTTACGGACTTCCTATATC TGCAATAATCGTCATACGATTCAACTCTTCTTGGAATTCGATAATGCGGATGAGAAGGAACTACGATTGGCCTTG GGGGATGGAGTTTTTCGACTCGCACGCCGCCGCCGCCTAAAAAACGAGCTTTATCTTGAGAGAATCTCTTCTCCG GAAACGAAGGAGCCGATATGCTCATCCTCAAAGGGTCAGCATGAACCGGATAGTGAGAACCGAGATATTCGACCT TTTGAGATGACTCGAAGAGCAGGCGTGATACTGTTCTTAGTATTGGCGGGAGCGACTGCCACAATTACGTGGCTA AAGATTGAAGAATTCAAGCAAGGAGGTGAGTGTAATCAGGTGGTACGTGAGTTCAGCTAAACTAAATGGCGCTCT TAGGATTACCTCGCCCATCGGAAACACTAGAGGTGTTGAGGATCCTAGAGAACTACATTCCGAGCAACTTTGCTA CAATCCTCAAGGCCTTCTGGAATCTTCTCAACAAGGACTTGTGTGTCTTGCAACCCCTGAAAGATCTATATACCG GCAGGGCGCTTCCGAGCAGGAGCATCGCAACGACATATTCTGCTATTCCATCGTCGTTGGCGTTTTGGCGCGCTG TCAAGGCACGCCACCATCTACTCACTTTGCTGTGCTCCACCTCTCTGGTTGCAAACCTGCTCGGCATTGGCCTCG GAACCCTTTTTCACGAAGACGATGTGGTAGCGAGATACTCTCATCGTTTTGAGCCGCTGATTTCGCCTATATTTC ACTCCCAGTCTCTTCTGGACTACCGCCACGAGTACACTGGCGCCAGCAGCCACGAAATGTACTACGTGCTTAGTA CCATGACATCCAACACTGCGCTTCCTCCCTGGTCGTCAAAAGATTGGTTCTTCTTGCCGCACCGCGTCGTACCAG GTGCGGGAACCTCGCCAGATACCACCTATACGCTGAACACTCGCGGCTTTGGTGTCCATGCCAACTGCACGGCCA TGTCGTCCTTGCCAGTGCCGCATTTATGGTCTTCTTGGGGTTGCACGAGCGCCACACAAAAGGCTGCTGAGCTGC TTTATATGTCAAACTATCCATCAAGACGTGGCAAGTCACTCGAAATTTCGGCTTCAAGCATTATCGAGACTTTCA AGGGAAGACCTTGTCCTCCGTTTGACTTCATAGTCGGCTGGGTCAGAGCCTTTCTCGATAATACAACAAGGTCGA ATAACACGGCATTATACTGCCGGCCCTTTTTCCAGACGGCCATGTTCGATGTCATCATCGACGAGCGAGGAAAGG TCCATTCCTACAGGCAAACGAGCAAGGACATTGAATCAAGCTTAAACTACCCGACCTTTGATCGGGATTCTCAGG CGGTATTTCTATATGCCATGGAGTATAACGATAGGGTGCCACAAAGCGCCCAGTGGCATACAGGAATCCTTCTTC GAGATTGGATGACGACTTTGATCGCGGCTCTGAAAGGTTCGCGAGGGTTTATTGATCCAGCCAGTCCGCCGCCCG ATCCCTTCGAGATGATGCCGGCTGTTGAAGCCGTCTACCGCCGAGGCTTCTCCTTCTTACTCGGCCGCCACTGGC AGCAGTTCTTCGAACCAGGCCGAGCGAACGACTCTATCACAGGACTCAGGCTGACACACGAGACGCGGATTTTCC TCGACAAGAAGGCCTTCGTCATTAGTATTGCAGTATTATCGGCAAACATGATTATTACCATCGTCTTTTATACAA GGCCAGCTATACGAATCCCACGCTTGCCGACAAGTATCGCGTCGACGATTGCATACGTGGCGCCTAGCCGGCTCG GGGCGATGTGGAACGATGAGGATTTGGAGAAGAGGACGTTCAGCTATGGGCGGTACATAGGGCTCGATGGCAAGC CGCATACCGGGATCGAAATGGATCCCCATGTGACGCTCGTCAAGCCGTCGTCCGACGACGGGAAGACGTGGAACG TCAAGGGGATCTTCAGGCGGCGCAAGTTGGCCGCTCGCTCGAGTGATGGAGGGCCGAAGTAG |